Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CENPF Gene 0 45.58 171.26 79.35 62.24 103.26 93.06 207.73 85.22 27.29 205.40 333.96 440.60 147.75 375.48 98.16 232.48 310.87 348.84 114.47 518.40 9.02 29.37 18.69 2 464322 Transcript 0 0.01 0.64 2.09 2.06 0.88 1.18 4.37 0.00 0.00 0.98 0.35 1.36 1.65 0.54 4.24 1.76 1.04 0.62 0.00 3.55 0.00 0.00 0.00 3 366955 Transcript 0 69.84 198.36 104.66 73.76 106.31 98.24 220.10 92.40 28.38 209.46 372.14 537.82 180.46 461.35 128.68 289.47 379.66 482.16 143.54 602.74 13.83 31.61 24.37 4 495259 Transcript 0 0.00 0.31 0.85 0.31 2.06 0.00 0.82 0.01 0.00 1.85 0.01 0.56 2.02 1.56 0.32 1.38 3.61 1.71 0.01 2.69 0.01 0.00 0.00 5 391896 Transcript 0 0.00 0.00 0.00 0.39 0.00 0.00 0.14 0.00 0.00 0.16 0.21 0.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 467765 Transcript 0 8.14 6.68 1.11 2.88 6.09 4.64 12.43 3.27 1.17 3.99 8.66 21.86 9.22 8.79 7.69 5.44 7.59 3.97 4.04 8.05 2.55 2.75 4.37 7 469862 Transcript 0 5.38 7.86 3.32 1.71 3.80 3.83 14.70 2.13 1.08 5.35 6.14 15.94 3.37 8.11 7.39 6.89 4.02 4.46 4.42 7.58 0.05 0.27 0.20 8 ER1a ExonRegion 1 16.62 45.25 11.03 10.51 21.22 16.40 71.64 7.38 4.36 26.38 100.60 7.67 7.16 106.58 10.51 96.65 131.57 169.34 30.32 157.55 5.10 5.12 10.47 9 E1a_E3a KnownJunction 1 16.45 53.81 30.72 27.20 15.53 0.00 58.52 15.73 4.77 63.45 101.18 38.26 26.30 94.77 5.19 61.86 116.22 270.36 53.27 238.86 16.80 5.27 3.16 10 ER2a ExonRegion 0 0.00 0.63 1.69 0.63 4.12 0.00 1.64 0.01 0.00 3.70 0.02 1.13 4.04 0.65 0.63 2.76 2.74 3.43 0.02 5.38 0.01 0.00 0.00 11 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.47 0.00 0.00 4.49 0.00 0.00 0.00 0.00 0.00 0.00 12 ER3a ExonRegion 1 18.81 92.44 28.51 35.35 11.91 4.54 35.18 22.27 9.17 58.73 174.63 188.12 49.64 226.36 22.26 131.38 216.74 216.92 46.36 339.28 9.98 13.97 10.43 13 E3_Da NovelBoundary 0 20.97 208.84 38.50 37.89 4.33 9.99 52.20 35.73 11.57 74.00 131.98 237.08 74.83 254.70 36.47 135.78 156.52 203.83 48.28 480.91 3.09 13.90 19.38 14 E3b_E4a KnownJunction 1 9.78 221.67 45.27 47.38 42.11 51.62 112.04 45.22 16.09 90.47 202.52 258.83 113.95 292.37 63.17 66.91 270.13 140.69 40.28 399.16 5.50 12.31 10.59 15 ER3b ExonRegion 0 9.85 207.16 40.54 45.45 26.06 33.65 80.53 35.32 13.00 84.42 189.09 258.07 93.19 298.48 49.57 105.45 214.41 179.47 44.60 436.63 4.69 15.04 15.32 16 ER4a ExonRegion 1 15.08 152.86 68.78 73.60 37.51 25.86 121.97 40.32 16.85 99.83 292.61 568.43 234.38 377.22 42.91 163.60 317.59 225.35 68.36 629.89 6.68 31.54 12.43 17 E4_Da KnownBoundary 0 0.00 0.00 6.74 8.89 0.00 0.00 6.01 0.00 0.00 1.26 2.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.75 0.00 0.00 0.00 18 E4a_E5a KnownJunction 0 37.19 143.92 66.76 55.10 39.81 27.88 92.39 37.25 22.19 97.32 405.68 771.55 300.95 409.80 51.80 194.91 366.06 222.73 93.56 586.06 11.18 20.94 3.41 19 ER4b ExonRegion 0 0.01 0.64 2.09 2.06 0.88 1.18 4.37 0.00 0.00 0.98 0.35 1.36 1.65 0.54 4.24 1.76 1.04 0.62 0.00 3.55 0.00 0.00 0.00 20 ER5a ExonRegion 1 43.60 219.71 66.92 54.47 44.72 30.23 113.25 30.89 13.86 96.61 305.65 728.02 260.18 433.85 35.34 235.55 315.02 324.92 100.55 556.59 7.19 37.44 18.00 21 E5a_E6a KnownJunction 1 13.71 131.75 32.38 33.20 35.31 27.54 123.92 23.29 18.55 97.11 378.73 589.54 194.31 322.92 25.22 109.80 365.59 224.84 89.13 397.69 14.58 40.66 3.50 22 ER6a ExonRegion 1 15.60 119.83 45.14 28.22 43.71 30.02 114.19 24.48 14.15 89.80 362.69 529.23 228.28 510.29 36.74 188.47 369.56 300.50 112.46 432.19 9.53 31.64 13.66 23 E6a_E7a KnownJunction 1 18.89 156.02 55.82 37.22 44.31 24.19 79.71 28.22 16.38 92.81 305.39 550.08 266.70 477.66 34.61 279.16 355.87 378.80 177.23 443.27 2.47 30.25 36.36 24 ER7a ExonRegion 1 12.98 86.28 40.50 45.76 43.48 28.89 119.85 22.75 14.56 79.89 298.55 513.40 191.31 428.07 30.86 176.01 338.52 303.16 88.27 523.23 4.39 26.10 18.64 25 E7a_E8a KnownJunction 0 19.48 110.44 57.18 74.68 43.55 17.21 110.23 27.48 17.77 79.40 305.60 610.25 238.78 317.97 52.04 144.06 362.79 184.55 114.83 603.89 5.25 29.21 18.69 26 ER8a ExonRegion 1 32.02 126.12 66.04 64.07 55.22 33.17 147.51 36.68 12.81 100.31 303.50 734.30 264.65 379.33 40.40 171.77 315.34 221.46 81.77 648.21 5.76 18.41 11.89 27 E8a_E9a KnownJunction 1 22.08 68.54 85.92 80.04 26.74 10.16 117.61 69.70 19.47 101.19 268.07 657.66 287.81 391.26 60.70 187.30 328.10 372.42 75.48 682.51 8.40 17.94 25.78 28 ER9a ExonRegion 1 13.44 76.65 61.34 55.79 46.36 35.73 123.81 41.67 12.04 87.00 316.47 800.33 209.30 433.10 38.55 198.94 347.59 374.90 82.72 585.04 20.06 20.16 19.51 29 E9a_E10a KnownJunction 1 3.04 129.38 29.33 39.89 30.81 48.44 173.29 29.45 4.75 85.04 305.71 678.82 122.56 588.68 39.06 229.85 365.50 405.17 92.14 543.30 44.91 11.88 30.90 30 ER10a ExonRegion 1 20.84 99.03 45.57 43.58 35.78 31.36 119.87 27.51 11.75 85.79 306.12 558.30 152.70 396.20 39.31 185.59 313.59 495.23 86.00 511.05 18.98 14.28 19.71 31 E10a_E11a KnownJunction 0 18.08 111.69 46.92 45.91 15.20 31.97 90.49 12.45 15.54 85.23 337.56 557.43 133.92 441.35 67.37 186.36 385.60 402.31 71.81 571.99 25.51 13.72 34.83 32 ER11a ExonRegion 1 11.53 48.46 44.99 29.71 25.52 33.17 102.97 29.54 12.83 79.98 308.31 507.39 90.48 567.31 53.33 242.00 332.53 471.85 96.34 555.39 12.49 18.45 20.25 33 E11a_E12a KnownJunction 1 6.89 49.60 39.32 23.87 23.94 44.24 86.38 31.26 11.40 70.49 271.86 380.67 46.10 422.39 69.23 227.80 325.67 386.93 86.40 485.07 8.83 18.31 8.28 34 ER12a ExonRegion 1 14.54 46.73 47.42 29.42 36.63 42.68 122.57 34.76 12.60 91.07 300.10 439.35 93.70 449.20 46.06 211.65 350.94 318.25 77.41 491.07 9.16 23.00 19.80 35 E12a_E13a KnownJunction 1 25.56 55.32 60.20 42.72 51.70 54.85 79.93 24.48 14.55 110.78 287.02 400.93 95.77 505.09 32.26 294.37 314.45 270.19 70.40 524.63 6.30 8.82 15.96 36 ER13a ExonRegion 1 11.50 93.83 35.31 44.17 46.51 53.56 151.25 41.74 20.64 134.65 330.14 561.76 174.75 422.14 38.39 208.37 332.51 300.31 87.96 567.68 7.95 26.64 17.31 37 E13a_E14a KnownJunction 1 20.74 129.71 55.08 43.98 48.81 117.32 184.16 46.25 20.95 186.85 429.21 402.13 246.41 602.10 68.11 322.05 491.54 687.79 170.64 744.89 17.36 49.60 37.65 38 ER14a ExonRegion 0 45.06 216.41 84.70 75.83 139.72 137.38 293.83 104.52 34.37 281.85 449.10 509.62 175.43 488.95 98.77 310.90 393.96 453.33 149.98 623.08 11.15 37.37 24.71 39 E14a_E17a KnownJunction 0 150.84 366.45 221.07 144.24 323.18 270.30 594.47 184.59 48.21 525.12 627.05 587.29 185.86 533.41 208.79 396.65 608.51 562.81 231.25 857.90 24.90 37.84 30.47 40 ER15a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 41 ER16a ExonRegion 0 0.00 0.00 0.00 0.78 0.00 0.00 0.28 0.00 0.00 0.33 0.41 0.31 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 42 ER17a ExonRegion 0 108.21 355.66 210.31 132.81 280.18 228.10 441.51 193.45 58.51 456.44 557.09 608.73 267.79 524.03 241.92 463.69 540.85 627.53 238.51 755.09 15.47 46.70 46.99 43 E17a_E18a KnownJunction 0 106.17 358.23 224.53 156.22 277.76 299.32 474.09 247.47 55.93 508.25 696.49 516.77 231.32 486.38 235.49 447.06 587.94 423.24 247.54 797.75 17.42 45.93 40.72 44 ER18a ExonRegion 0 135.78 403.12 214.27 136.82 311.88 284.28 516.09 222.03 60.12 494.99 579.84 621.41 274.46 506.69 261.08 406.61 527.15 450.64 250.31 787.15 10.08 56.28 30.99 45 E18a_E19a KnownJunction 0 221.52 458.14 213.42 142.54 303.82 386.82 540.77 254.54 73.64 520.10 541.29 848.68 343.97 550.77 294.21 385.80 484.34 391.57 204.05 883.08 14.15 54.01 10.50 46 ER19a ExonRegion 0 142.43 391.35 190.15 132.01 313.77 227.82 509.49 247.92 70.45 536.40 557.46 669.38 297.67 450.62 251.24 325.01 393.05 329.36 210.51 790.54 8.83 56.78 25.70 47 E19a_E20a KnownJunction 0 0.00 0.00 0.00 25.94 16.30 2.90 2.12 6.08 1.59 9.40 11.53 13.50 0.00 7.06 0.00 4.36 0.00 0.00 0.00 6.01 0.00 0.00 0.00 48 E19a_E21b KnownJunction 0 207.96 529.18 253.01 138.78 396.18 274.50 734.07 356.07 84.32 643.77 529.03 733.29 261.83 444.29 286.79 261.38 358.67 264.60 143.25 733.26 11.37 44.58 27.91 49 ER20a ExonRegion 0 2.12 2.03 0.00 22.11 10.70 7.74 2.21 3.46 1.24 9.68 8.59 9.14 0.00 7.94 1.61 2.97 3.30 2.05 0.00 4.26 0.00 0.00 0.00 50 ER20b ExonRegion 0 8.14 6.68 1.11 2.88 6.09 4.64 12.43 3.27 1.17 3.99 8.66 21.86 9.22 8.79 7.69 5.44 7.59 3.97 4.04 8.05 2.55 2.75 4.37 51 ER21a ExonRegion 0 8.65 7.59 4.20 3.42 7.60 5.83 16.16 4.27 0.93 8.41 10.34 14.55 6.74 8.10 6.08 4.87 4.74 3.38 2.47 8.78 0.09 0.53 0.41 52 E21_Ab KnownBoundary 0 5.85 0.00 0.00 1.86 15.45 9.65 4.50 2.55 0.00 0.00 10.06 0.00 6.82 9.48 0.00 0.00 0.00 0.00 4.80 2.43 0.00 0.00 0.00 53 ER21b ExonRegion 0 176.18 543.22 230.85 153.84 335.43 292.25 550.01 274.77 69.17 564.35 626.19 691.38 301.49 446.98 302.45 405.55 495.34 388.00 199.40 875.50 13.55 65.10 30.85 54 E21a_E22a KnownJunction 0 229.08 658.24 304.78 232.80 226.23 262.80 579.68 353.40 68.14 627.47 704.18 691.13 255.18 384.60 333.40 367.85 557.46 375.07 358.13 966.56 16.62 71.89 33.04 55 ER22a ExonRegion 0 227.99 592.38 292.43 179.89 365.00 321.19 571.55 299.42 79.34 620.98 713.05 624.01 205.62 563.79 398.47 593.19 609.07 971.20 326.40 897.83 21.39 71.33 37.98 56 E22a_E23a KnownJunction 0 546.62 884.32 333.10 274.86 425.38 532.36 793.65 419.24 107.90 776.77 682.96 586.54 233.43 770.80 650.35 1321.19 774.10 1838.37 619.50 1248.49 19.27 110.16 94.41 57 ER22b ExonRegion 0 2.12 8.13 2.45 0.00 0.00 1.83 13.24 0.00 1.24 2.29 1.93 17.32 0.00 8.12 8.70 8.92 3.30 5.54 6.37 6.38 0.00 0.00 0.00 58 ER23a ExonRegion 1 231.62 464.70 358.70 162.20 235.38 245.48 410.43 277.00 68.49 536.87 568.08 302.41 107.95 568.48 536.65 686.48 521.50 1217.33 350.69 759.63 22.25 60.74 38.83 59 E23a_E24a KnownJunction 0 190.70 456.50 349.93 176.77 345.84 277.00 446.00 284.23 72.16 565.47 504.02 185.61 99.83 497.15 498.92 414.93 398.97 1286.55 275.02 619.61 23.72 50.15 32.27 60 ER24a ExonRegion 1 81.39 236.87 138.54 73.18 160.28 94.50 196.65 156.82 35.63 264.78 189.01 107.46 28.97 193.22 206.13 140.62 138.70 266.82 107.16 375.64 6.58 23.73 10.83 61 IG30_SR1 SilentIntergenicRegion 0 3.14 27.03 6.36 5.56 8.18 6.02 23.20 6.61 4.29 24.08 8.21 9.70 1.91 5.14 1.14 2.99 5.94 27.24 10.69 67.70 0.73 0.80 0.00 62 IG30_SR2 SilentIntergenicRegion 0 3.09 30.50 6.73 6.52 9.34 2.92 44.26 10.63 8.24 19.23 7.67 25.83 3.84 7.83 4.14 11.01 1.52 44.59 8.88 89.15 0.00 1.02 0.00 63 IG30_AR1 ActiveIntergenicRegion 0 1.71 17.57 3.77 4.17 8.81 5.82 24.30 6.11 3.32 16.15 3.48 7.48 1.33 5.24 1.74 3.80 3.47 50.84 12.64 53.36 0.22 1.26 0.43 64 IG30_SR3 SilentIntergenicRegion 0 2.55 28.64 8.86 7.07 15.26 7.95 38.20 9.27 2.38 27.72 3.71 10.14 4.16 6.38 1.51 6.96 4.69 42.21 14.60 54.46 0.00 1.65 1.90 65 IG30_AR2 ActiveIntergenicRegion 0 3.06 32.44 8.68 6.56 13.04 8.68 33.39 11.64 5.79 17.84 6.44 4.94 0.45 5.28 2.20 4.92 4.13 69.98 19.00 60.09 0.51 0.92 1.36