Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	NSL1	Gene	0	55.41	68.97	47.95	72.46	90.98	89.32	87.29	59.36	47.54	73.80	99.21	109.57	102.72	87.83	78.38	64.28	76.40	44.66	44.44	92.62	23.09	50.56	28.41
2	487995	Transcript	0	3.46	3.12	3.51	8.60	3.07	1.69	6.83	5.42	2.74	0.92	0.70	2.69	6.72	0.89	1.36	0.00	0.76	0.77	1.15	17.87	0.00	0.85	1.94
3	366975	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
4	391900	Transcript	0	16.76	8.70	9.67	8.21	11.95	12.48	10.15	14.01	12.22	14.71	32.63	22.44	18.26	29.66	24.23	11.57	23.30	3.96	9.98	14.86	3.47	17.16	6.20
5	366976	Transcript	0	0.00	13.42	1.83	2.06	3.14	5.79	8.61	2.55	1.79	9.00	0.00	12.30	6.82	2.47	4.45	0.00	4.77	6.84	0.00	5.37	0.00	0.00	0.00
6	422588	Transcript	0	0.00	0.00	0.00	1.80	0.00	0.00	0.00	0.00	1.71	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
7	366977	Transcript	0	77.74	97.90	96.86	117.43	219.81	154.37	138.49	103.44	86.15	134.49	260.87	337.80	355.90	256.79	175.43	227.47	214.55	125.22	141.64	187.71	70.05	96.15	92.79
8	473995	Transcript	1	3.84	5.14	3.27	8.74	4.15	3.60	15.90	10.89	6.37	4.42	2.03	13.10	16.12	2.98	5.11	4.37	7.32	1.94	2.75	24.52	0.00	1.15	3.38
9	366978	Transcript	0	10.40	16.55	7.07	27.97	13.82	13.07	9.50	14.77	14.76	21.85	2.06	2.03	1.34	2.74	6.91	3.69	4.09	16.92	6.08	17.00	1.81	1.65	2.33
10	ER1a	ExonRegion	1	71.96	62.59	26.45	21.74	114.15	260.29	161.51	30.42	25.66	48.94	95.02	16.18	18.59	99.45	83.65	79.66	111.27	43.91	31.57	74.75	53.34	37.80	39.47
11	E1_Ab	KnownBoundary	1	0.00	8.75	21.79	5.33	7.89	10.51	16.96	12.24	24.74	63.23	275.17	26.11	28.41	68.87	45.86	36.06	256.76	16.54	21.93	108.08	99.96	31.23	7.77
12	ER1b	ExonRegion	1	6.04	12.14	44.55	23.25	9.99	13.97	10.01	49.16	50.46	100.59	314.27	22.54	9.52	173.83	113.58	66.26	270.19	69.24	37.10	187.73	121.85	47.06	27.73
13	E1_Ac	KnownBoundary	1	20.15	14.67	50.89	42.69	19.35	31.91	8.30	77.14	56.83	90.98	275.39	25.96	6.17	274.71	124.98	98.44	240.21	101.69	57.23	250.87	120.84	68.03	63.51
14	ER1c	ExonRegion	1	25.27	32.70	68.76	68.01	12.85	31.43	25.18	89.61	62.22	122.56	190.22	26.40	63.64	378.99	251.61	260.67	163.10	224.99	120.54	217.90	66.67	142.66	121.73
15	E1_Da	NovelBoundary	0	3.19	0.00	6.65	6.03	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.47	0.00	4.19	0.00	15.13	0.00	3.26	0.00	0.00	0.00
16	E1a_E2a	KnownJunction	1	27.71	49.46	79.80	104.95	19.02	41.62	10.02	115.29	62.01	136.30	171.83	36.16	134.73	210.14	205.82	444.41	114.07	335.07	124.24	209.71	43.12	106.73	188.82
17	ER2a	ExonRegion	0	47.50	93.96	101.49	117.23	157.43	118.48	83.54	96.47	66.54	139.09	217.44	137.78	167.54	150.88	151.05	209.89	151.92	190.13	96.65	202.56	47.98	102.22	99.70
18	E2a_E3a	KnownJunction	0	154.10	167.40	135.80	136.08	388.03	451.56	281.45	140.47	98.70	175.78	347.77	182.16	136.35	158.22	235.61	130.99	172.88	76.03	99.20	248.00	60.54	154.80	65.22
19	ER3a	ExonRegion	0	181.71	261.91	149.76	163.89	281.38	488.70	335.29	148.08	121.27	207.18	383.57	294.40	251.36	262.74	212.35	187.40	305.87	112.19	109.45	284.59	87.07	141.01	56.24
20	E3_Da	KnownBoundary	0	6.37	3.09	13.36	6.06	0.00	0.00	8.08	11.67	5.82	4.62	2.68	0.00	0.00	0.00	4.45	0.00	0.00	2.57	4.42	16.49	0.00	2.57	0.00
21	E3a_E4a	KnownJunction	0	275.01	335.14	195.20	265.13	264.26	223.05	249.39	181.55	153.96	267.57	429.48	574.99	421.40	324.86	233.02	375.88	313.70	185.05	172.33	399.42	115.65	257.55	98.42
22	E3a_E7a	NovelJunction	0	0.00	6.71	1.30	15.98	20.88	13.12	0.00	1.85	4.22	2.98	2.68	0.00	7.95	0.00	0.00	12.82	0.00	1.70	4.71	3.26	2.41	0.00	0.00
23	E3a_E8a	KnownJunction	0	0.00	0.00	0.00	1.80	0.00	0.00	0.00	0.00	1.71	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
24	ER3b	ExonRegion	0	3.46	3.12	3.51	8.60	3.07	1.69	6.83	5.42	2.74	0.92	0.70	2.69	6.72	0.89	1.36	0.00	0.76	0.77	1.15	17.87	0.00	0.85	1.94
25	ER4a	ExonRegion	0	182.10	201.25	154.06	191.05	259.74	243.46	237.78	141.83	142.20	232.07	420.49	464.67	359.51	327.98	270.77	272.63	366.40	168.48	138.82	361.89	122.77	213.47	98.56
26	E4_Da	KnownBoundary	0	2.89	0.00	2.87	12.92	7.56	0.00	19.08	14.54	11.26	7.20	2.68	10.80	12.99	0.00	0.00	12.99	0.00	0.00	0.00	46.85	0.00	0.00	3.59
27	E4a_E5a	KnownJunction	0	39.04	5.92	17.15	10.95	11.88	20.44	8.13	14.13	16.87	22.64	53.12	31.21	27.27	46.21	40.05	18.11	39.18	6.88	20.24	5.88	3.15	27.56	7.68
28	E4a_E7a	KnownJunction	0	106.32	117.41	115.81	121.33	302.97	243.50	211.94	107.86	87.82	143.47	276.81	354.87	282.12	249.28	200.38	189.52	244.69	112.88	75.96	176.86	64.12	91.42	67.01
29	E4a_E8a	KnownJunction	0	0.00	13.42	1.83	2.06	3.14	5.79	8.61	2.55	1.79	9.00	0.00	12.30	6.82	2.47	4.45	0.00	4.77	6.84	0.00	5.37	0.00	0.00	0.00
30	E4a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.46	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
31	ER4b	ExonRegion	0	5.04	7.54	4.46	13.22	5.01	4.78	19.58	18.72	8.73	6.75	4.07	14.06	20.05	3.16	6.83	8.74	10.46	3.08	4.24	35.45	0.00	1.40	5.49
32	ER4c	ExonRegion	1	4.63	10.55	2.45	4.77	7.19	7.91	28.71	4.65	3.24	3.23	0.12	1.35	26.67	0.61	1.09	0.00	0.83	0.00	0.80	12.90	0.00	0.00	0.00
33	ER4d	ExonRegion	0	2.65	2.74	2.09	4.25	3.29	2.41	12.22	3.06	4.01	2.09	0.00	12.14	12.20	2.81	3.39	0.00	4.17	0.80	1.27	13.58	0.00	0.90	1.27
34	I4	Intron	0	3.61	7.12	1.61	7.46	4.95	1.20	10.81	8.21	6.65	5.69	0.33	3.93	8.41	0.71	4.26	2.12	3.48	1.00	1.09	18.60	0.31	0.18	1.17
35	I4_SR1	SilentIntronRegion	0	3.62	7.13	1.61	7.46	4.96	1.20	10.82	8.22	6.66	5.69	0.33	3.93	8.41	0.71	4.26	2.12	3.48	1.00	1.09	18.61	0.31	0.18	1.17
36	E5_Aa	NovelBoundary	0	20.23	47.10	240.29	404.41	14.18	15.96	31.09	310.52	298.09	215.00	2.53	0.00	6.01	0.00	0.00	3.16	16.08	111.39	9.60	33.88	5.56	0.00	7.00
37	ER5a	ExonRegion	0	11.03	19.76	10.87	11.37	20.74	16.63	21.01	26.01	17.93	19.08	42.25	36.11	27.04	34.34	30.89	16.29	30.41	4.83	9.71	33.82	7.26	22.87	10.92
38	E5_Da	NovelBoundary	0	14.74	15.00	3.34	15.22	33.53	0.00	21.86	25.79	22.31	18.40	0.00	0.00	6.66	0.00	0.00	0.00	9.35	2.40	9.32	30.36	5.62	0.00	15.11
39	E5a_E7a	NovelJunction	0	16.52	0.00	3.16	3.36	50.42	13.63	10.29	11.87	4.77	18.45	37.69	11.70	25.16	41.26	8.90	4.27	37.68	4.31	4.80	10.16	7.78	8.51	0.00
40	E5a_E8a	NovelJunction	0	0.00	3.35	0.00	1.56	15.03	0.00	4.15	6.98	0.00	7.36	9.53	6.60	27.27	17.25	0.00	12.90	14.03	1.58	0.00	5.56	0.00	2.88	7.94
41	ER6a	ExonRegion	0	0.21	0.41	0.98	2.32	3.21	0.37	1.32	1.90	1.85	2.41	2.51	0.00	0.47	8.45	1.74	0.30	0.33	0.18	0.00	4.89	0.00	1.04	0.00
42	I6_AR1	ActiveIntronRegion	0	5.76	25.19	2.55	11.63	6.15	4.44	11.70	6.80	7.59	5.89	0.93	9.96	12.07	1.15	2.41	2.46	3.27	3.01	1.37	20.91	2.72	0.56	1.89
43	E7_Aa	NovelBoundary	0	13.63	12.76	8.40	20.34	24.11	29.30	45.49	26.21	3.21	12.20	9.58	0.00	0.00	2.30	6.30	4.36	4.77	5.14	7.72	15.72	0.00	0.00	8.02
44	ER7a	ExonRegion	0	82.42	103.98	116.82	134.14	270.09	175.40	133.84	127.32	103.13	164.82	335.22	409.90	419.21	349.07	222.59	256.13	299.46	167.79	189.67	249.44	102.38	134.26	131.59
45	E7_Da	NovelBoundary	0	16.74	0.00	4.88	23.17	4.33	14.20	28.31	12.86	9.17	0.00	4.79	12.60	8.28	7.06	4.45	0.00	0.00	0.00	0.00	32.98	0.00	0.00	0.00
46	E7a_E8a	KnownJunction	0	108.98	139.78	138.97	175.97	284.30	181.66	166.18	152.06	131.19	205.33	411.42	551.13	691.51	414.86	260.59	453.30	300.42	205.44	289.04	276.76	110.33	142.61	168.34
47	E8_Aa	NovelBoundary	0	19.71	25.59	7.95	20.18	19.95	14.31	32.33	11.21	9.61	8.49	4.79	12.60	6.01	7.06	4.45	0.00	17.11	17.08	4.42	2.62	2.97	8.14	4.18
48	ER8a	ExonRegion	0	148.35	206.85	135.97	173.01	244.18	257.08	239.14	175.39	137.35	230.30	462.15	429.91	396.97	404.19	266.76	324.01	362.63	187.23	240.42	257.63	126.62	178.77	139.81
49	E8_Da	KnownBoundary	0	496.75	432.88	132.61	199.14	534.04	458.77	448.91	239.34	163.48	301.50	484.86	520.82	677.72	466.19	410.66	495.51	452.45	196.03	414.88	298.69	152.65	256.38	253.44
50	ER8b	ExonRegion	0	119.71	122.94	98.06	128.14	195.50	143.63	168.56	107.69	80.53	129.73	157.99	244.28	229.89	144.25	151.68	85.71	97.59	30.93	62.12	137.07	19.06	102.94	38.04
51	E8_Db	KnownBoundary	1	14.08	35.78	20.70	62.20	30.14	4.54	47.83	41.16	35.13	32.91	13.00	38.26	54.22	19.42	9.77	28.88	13.09	13.06	24.00	40.84	0.00	30.25	0.00
52	ER8c	ExonRegion	0	13.26	30.44	15.84	38.27	21.86	16.92	42.01	26.53	22.46	24.32	20.03	35.32	30.77	13.95	18.18	10.94	13.62	14.76	11.91	47.80	3.36	16.31	4.24
53	E8_Dc	NovelBoundary	0	7.56	22.23	6.48	10.69	22.50	19.76	41.78	6.24	10.10	6.88	2.68	18.16	13.64	7.06	0.00	15.47	0.00	8.62	3.86	29.34	2.72	2.45	3.24
54	I8	Intron	0	11.57	29.58	9.07	40.83	33.69	27.64	28.35	22.35	24.41	26.20	4.88	10.57	7.82	5.46	6.66	6.30	5.70	21.30	9.84	35.36	2.93	5.17	4.95
55	I8_SR1	SilentIntronRegion	0	6.48	18.95	6.15	25.01	22.49	14.15	23.13	12.92	15.62	15.76	4.67	10.36	6.55	4.33	4.92	5.99	4.60	17.10	9.16	29.96	2.59	3.17	4.16
56	I8_AR1	ActiveIntronRegion	0	12.88	49.11	15.08	53.36	36.86	26.53	26.63	33.76	40.47	41.03	8.35	9.92	12.95	8.08	11.00	9.38	10.96	37.92	10.12	55.64	5.67	8.35	8.58
57	I8_AR2	ActiveIntronRegion	0	17.57	39.41	11.68	58.12	46.84	44.29	35.00	32.03	32.56	36.55	4.58	10.93	8.55	6.43	8.09	6.20	6.19	23.75	10.64	38.69	2.91	7.11	5.32
58	E9_Aa	NovelBoundary	0	60.31	52.56	12.77	38.72	34.80	34.53	26.67	22.18	52.57	34.09	4.11	0.00	0.00	10.30	0.00	8.12	0.00	34.53	20.99	12.34	0.00	5.02	3.41
59	ER9a	ExonRegion	0	20.81	33.10	14.14	55.95	27.64	26.13	18.99	29.54	29.51	39.23	4.13	4.07	2.69	5.48	13.82	7.38	8.19	33.84	12.16	33.99	3.61	3.31	4.66
60	IG13_SR2	SilentIntergenicRegion	0	7.71	12.18	5.56	16.61	16.79	15.99	7.35	9.55	12.95	7.48	1.84	1.11	3.08	1.76	2.27	2.36	2.09	5.18	5.96	9.85	2.23	1.12	3.16