Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SERTAD4 Gene 0 28.51 183.23 137.07 77.91 86.14 116.24 132.19 47.07 41.48 80.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 43.12 28.76 67.92 24.02 160.96 65.83 2 367012 Transcript 0 17.98 85.76 83.74 38.50 42.65 58.74 62.50 27.70 21.08 46.62 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23.96 14.08 36.74 17.72 79.15 29.87 3 490620 Transcript 0 1.39 2.62 7.34 4.37 2.94 3.25 5.32 0.36 3.39 7.62 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19.65 0.87 8.98 3.54 16.00 10.68 4 482421 Transcript 0 3.17 4.58 5.35 2.39 3.12 3.67 5.96 1.73 1.54 8.48 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.71 2.39 8.51 7.16 20.06 12.33 5 483884 Transcript 0 0.00 0.00 0.20 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.77 0.00 0.69 0.00 6 ER1a ExonRegion 0 0.44 5.61 2.61 0.86 1.23 6.28 4.56 0.38 1.19 4.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13.61 3.47 10.23 12.55 9.00 11.73 7 E1a_E3b KnownJunction 0 9.19 24.54 16.32 4.53 0.00 15.96 16.12 5.05 4.34 14.91 0.00 0.00 0.00 0.00 0.00 0.00 0.00 38.14 8.47 33.30 35.46 23.09 22.45 8 ER2a ExonRegion 0 2.77 2.22 7.94 0.77 5.88 1.62 4.16 0.72 3.39 3.77 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19.69 1.74 11.82 4.73 15.16 9.50 9 E2a_E3b KnownJunction 0 0.00 3.03 6.74 7.96 0.00 4.88 6.49 0.00 3.39 11.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19.61 0.00 6.14 2.35 16.84 11.87 10 ER3a ExonRegion 0 6.35 9.15 9.19 4.77 2.68 7.34 11.92 3.46 3.09 15.48 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24.94 4.78 17.02 14.32 26.04 20.56 11 ER3b ExonRegion 0 9.71 33.67 19.46 8.66 8.89 42.29 41.82 8.08 8.21 37.17 0.00 0.00 0.00 0.00 0.00 0.00 0.00 56.47 18.27 51.25 43.43 60.30 44.22 12 E3_Ac KnownBoundary 0 6.30 56.37 17.39 8.19 28.01 86.83 70.13 11.17 11.72 49.18 0.00 0.00 0.00 0.00 0.00 0.00 0.00 79.63 22.97 73.89 61.90 84.01 65.05 13 ER3c ExonRegion 0 6.54 66.82 44.79 26.06 22.97 35.19 50.72 21.03 20.41 56.64 0.00 0.00 0.00 0.00 0.00 0.00 0.00 81.21 24.53 57.53 42.82 114.08 81.85 14 E3a_E4a KnownJunction 0 3.19 79.13 65.34 36.89 43.38 43.95 66.77 20.50 29.08 96.11 0.00 0.00 0.00 0.00 0.00 0.00 0.00 87.05 17.69 105.40 55.91 88.42 57.79 15 E3a_E5a NovelJunction 0 0.00 0.00 1.71 3.30 3.48 8.63 8.92 2.55 1.71 4.59 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.57 0.00 3.26 0.00 16.66 0.00 16 E3a_E5b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 ER4a ExonRegion 0 9.76 76.21 75.62 46.22 53.47 95.06 104.56 30.93 46.71 83.34 0.00 0.00 0.00 0.00 0.00 0.00 0.00 65.36 36.36 79.79 47.68 215.97 84.33 18 E4a_E5a KnownJunction 0 18.67 108.53 125.87 82.84 51.61 153.55 169.72 44.40 74.33 112.44 0.00 0.00 0.00 0.00 0.00 0.00 0.00 97.79 32.38 114.86 74.50 333.60 148.96 19 E4a_E5c KnownJunction 0 0.00 0.00 1.51 0.00 3.57 0.00 0.00 0.00 0.00 1.48 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.48 0.00 0.00 0.00 14.08 4.10 20 E5_Aa NovelBoundary 0 7.04 35.32 2.42 1.66 12.65 56.33 31.22 2.18 3.82 4.49 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.60 3.86 20.90 0.00 8.57 16.56 21 ER5a ExonRegion 0 15.49 117.50 102.48 67.66 61.48 111.65 123.34 41.69 45.57 80.95 0.00 0.00 0.00 0.00 0.00 0.00 0.00 114.72 48.75 110.74 60.85 200.45 125.94 22 E5_Da KnownBoundary 0 33.49 122.35 128.77 107.11 44.91 138.16 186.23 73.44 62.15 87.14 0.00 0.00 0.00 0.00 0.00 0.00 0.00 144.34 50.92 139.47 78.09 153.63 171.92 23 ER5b ExonRegion 0 35.85 239.36 163.10 95.43 106.40 140.25 162.29 54.31 47.34 91.14 0.00 0.00 0.00 0.00 0.00 0.00 0.00 36.35 30.18 72.09 20.52 179.54 67.00 24 E5_Ab KnownBoundary 0 52.31 125.77 121.49 65.16 100.51 113.63 98.13 55.45 33.68 43.65 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24.08 8.56 63.34 16.00 137.59 49.85 25 E5_Ac KnownBoundary 0 44.82 194.04 168.12 70.75 160.02 181.60 150.06 55.04 41.00 75.78 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.04 31.72 41.10 5.13 139.61 33.38 26 ER5c ExonRegion 0 41.93 153.60 174.46 84.07 130.28 145.44 117.01 64.55 48.02 73.72 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23.96 26.88 61.24 11.57 155.29 35.70 27 ER5d ExonRegion 0 32.50 129.76 196.83 84.50 109.26 111.83 108.51 79.63 53.99 105.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21.43 28.19 56.98 14.44 167.98 48.19 28 E5_Db KnownBoundary 0 46.23 113.66 252.71 84.11 59.76 82.17 109.48 118.25 71.24 111.91 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22.14 16.85 59.95 9.20 86.09 37.56 29 E5b_E6a KnownJunction 0 0.00 3.35 3.19 0.00 0.00 0.00 2.25 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.07 0.00 0.00 0.00 18.74 7.60 30 ER5e ExonRegion 0 26.44 73.54 152.94 53.17 62.96 72.47 67.03 51.06 31.44 76.43 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.73 14.22 31.34 2.36 104.96 18.30 31 E6_Aa NovelBoundary 0 3.33 11.91 14.10 3.16 8.15 11.30 8.92 16.55 12.36 12.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.23 0.00 2.36 0.00 5.39 0.00 32 ER6a ExonRegion 0 0.00 4.28 2.26 0.00 0.00 0.00 2.90 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.85 0.00 5.52 1.97 11.04 3.61 33 ER6b ExonRegion 0 0.00 0.00 0.41 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.55 0.00 1.39 0.00