Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 HHAT Gene 0 12.68 21.22 30.11 20.44 15.72 22.40 20.00 5.26 10.92 13.61 60.85 14.36 19.22 19.28 2.40 17.78 10.36 24.51 14.11 24.10 34.08 37.46 26.89 2 413764 Transcript 0 4.72 1.69 5.60 5.49 1.66 0.76 3.27 0.53 0.00 5.89 0.83 0.90 0.00 0.24 0.00 0.00 0.00 4.19 5.94 2.65 4.60 3.29 9.74 3 391905 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 308852 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 261458 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 367010 Transcript 0 0.59 0.00 0.25 0.00 0.00 0.00 0.73 0.00 0.00 0.24 0.80 0.00 0.00 0.19 0.00 1.24 2.75 0.38 0.44 0.00 0.61 0.00 0.00 7 426968 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 367009 Transcript 0 0.00 0.00 0.01 0.00 0.00 0.00 0.20 0.00 0.00 0.00 0.29 0.00 0.00 0.00 0.00 0.00 0.49 0.00 0.00 0.63 0.33 0.00 0.00 9 ER1a ExonRegion 0 1.88 3.37 5.71 8.92 3.33 1.52 6.53 1.07 0.00 6.22 1.65 1.80 0.00 0.48 0.00 0.00 0.00 8.38 11.89 5.29 9.19 4.25 19.48 10 E1a_E4a KnownJunction 0 7.56 0.00 5.50 2.06 0.00 0.00 0.00 0.00 0.00 5.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.33 0.00 11 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 8.36 1.32 0.00 0.00 0.00 0.00 0.00 0.00 2.34 0.00 4.81 0.00 1.74 1.78 1.56 0.06 0.00 0.86 12 E2_Ab KnownBoundary 0 0.00 3.29 0.00 0.00 3.65 16.98 2.16 2.26 1.79 1.67 0.00 0.00 0.00 2.47 0.00 8.72 4.11 2.57 16.94 5.94 0.00 2.69 7.60 13 ER2b ExonRegion 0 0.71 0.00 1.10 0.69 0.00 5.85 1.04 0.00 0.95 2.00 3.88 0.00 1.12 2.31 0.35 5.96 2.62 1.57 4.54 2.87 12.08 7.01 17.78 14 E2a_E4a KnownJunction 0 0.00 0.00 1.51 0.00 0.00 5.28 0.00 0.00 1.79 1.58 0.00 0.00 0.00 2.12 4.45 0.00 4.58 1.62 4.80 5.37 8.83 8.33 0.00 15 ER3a ExonRegion 0 1.17 0.00 0.51 0.00 0.00 0.00 1.47 0.00 0.00 0.47 1.61 0.00 0.00 0.37 0.00 2.47 1.96 0.76 0.88 0.00 1.22 0.00 0.00 16 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.55 0.00 0.00 0.00 0.00 0.00 0.00 17 ER4a ExonRegion 0 2.75 0.77 10.30 8.74 1.22 7.10 11.96 2.94 6.99 8.90 9.29 13.31 8.40 8.39 1.17 15.57 8.89 13.03 19.99 12.11 40.75 20.31 34.47 18 E4a_E5a KnownJunction 0 3.78 0.00 14.16 9.69 0.00 20.95 18.50 0.00 5.01 10.07 14.58 40.06 6.33 17.13 0.00 45.63 17.95 1.99 17.98 3.26 19.27 7.84 52.84 19 E4a_E6a NovelJunction 0 0.00 0.00 0.00 5.16 0.00 11.53 0.00 0.00 0.00 1.42 0.00 0.00 0.00 4.89 0.00 4.27 4.58 6.84 0.00 2.43 2.59 0.00 12.38 20 ER5a ExonRegion 0 0.72 1.53 9.86 9.36 7.83 17.26 19.22 0.74 8.97 9.39 17.05 15.92 13.04 20.71 2.73 37.37 13.35 5.54 13.16 12.36 46.31 21.66 30.27 21 E5a_E6a KnownJunction 1 0.00 0.00 14.49 9.49 7.56 18.74 17.67 2.46 5.18 8.95 7.58 0.00 28.73 18.31 4.45 30.33 8.60 5.31 12.80 14.45 52.02 27.98 37.82 22 ER6a ExonRegion 0 3.64 2.39 15.36 7.05 8.40 8.24 12.37 0.80 6.83 7.77 14.97 13.98 13.86 11.97 2.34 17.75 11.00 6.73 10.93 11.65 55.65 29.59 17.90 23 E6a_E7a KnownJunction 0 6.22 3.29 18.75 7.09 11.80 23.17 18.06 1.60 5.93 15.42 26.38 6.30 13.96 18.89 0.00 23.93 4.58 16.66 4.80 26.78 68.20 22.66 10.16 24 E6a_E8a KnownJunction 0 0.00 0.00 0.00 1.66 0.00 0.00 0.00 0.00 1.45 1.45 2.68 0.00 0.00 2.12 0.00 3.67 0.00 4.39 8.38 0.00 11.86 2.33 3.93 25 E7_Aa NovelBoundary 0 0.00 0.00 1.30 1.70 0.00 0.00 0.00 0.00 0.00 0.00 33.48 0.00 0.00 0.00 0.00 4.36 3.83 1.74 0.00 0.00 8.46 0.00 0.00 26 ER7a ExonRegion 0 2.85 2.40 25.85 9.99 4.12 20.08 12.36 1.31 10.57 11.43 61.25 9.46 8.90 22.91 2.95 27.08 20.45 13.82 16.40 28.17 47.93 27.88 13.57 27 E7a_E8a KnownJunction 0 0.00 5.26 27.05 9.22 0.00 14.20 14.04 2.26 10.56 15.90 71.70 24.76 33.11 26.25 0.00 37.94 16.08 12.39 16.28 20.58 49.92 26.51 19.21 28 E7a_E9a NovelJunction 0 0.00 0.00 2.39 2.03 0.00 0.00 0.00 0.00 2.66 0.00 12.95 0.00 0.00 2.12 0.00 0.00 0.00 0.00 0.00 0.00 2.66 0.00 0.00 29 ER8a ExonRegion 0 1.78 4.26 25.44 11.39 10.63 15.30 14.81 0.73 7.51 12.35 69.07 12.35 11.64 19.71 2.82 19.04 14.44 14.59 20.25 22.39 49.15 36.99 33.06 30 E8a_E9a KnownJunction 0 6.22 0.00 14.25 13.55 8.40 10.68 3.62 1.93 7.75 11.34 65.23 11.70 20.13 21.37 0.00 23.75 9.07 14.22 30.68 28.38 38.43 31.72 30.56 31 ER9a ExonRegion 0 1.53 1.60 17.03 12.65 2.61 13.47 10.60 2.18 6.55 12.60 70.64 8.05 10.58 22.10 3.20 20.04 12.93 11.49 13.35 14.88 46.59 31.24 33.50 32 E9a_E11a KnownJunction 0 0.00 2.83 15.79 5.89 0.00 15.84 12.10 0.00 4.46 13.73 73.33 6.15 6.82 35.91 13.35 14.53 3.65 5.93 0.00 25.06 20.57 10.96 23.82 33 ER10a ExonRegion 0 0.00 0.00 0.01 0.00 0.00 0.00 0.39 0.00 0.00 0.00 0.58 0.00 0.00 0.00 0.00 0.00 0.98 0.00 0.00 1.27 0.66 0.00 0.00 34 E10a_E11a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 35 ER11a ExonRegion 0 0.95 2.42 21.94 14.18 6.43 20.79 12.86 3.81 9.18 9.95 66.05 12.10 22.24 25.07 4.27 22.01 12.79 19.29 18.02 17.84 58.60 29.38 39.27 36 E11a_E12a KnownJunction 0 3.56 6.12 19.78 14.75 3.57 18.17 13.56 2.55 12.73 6.12 36.96 0.00 14.12 14.72 8.90 27.51 8.04 7.34 12.42 17.90 51.95 22.23 24.24 37 ER12a ExonRegion 0 2.00 4.58 16.85 13.40 9.22 25.57 14.45 1.73 13.45 7.14 55.36 8.30 22.54 22.33 7.33 36.66 8.99 13.70 11.33 33.98 57.85 25.81 36.95 38 E12a_E13a KnownJunction 0 3.04 2.89 13.54 9.76 12.05 30.27 14.75 0.00 10.04 10.02 68.33 6.30 14.12 23.37 8.90 31.10 8.79 17.82 12.42 46.47 64.12 42.50 55.32 39 ER13a ExonRegion 0 1.00 9.75 13.25 9.41 5.31 12.93 10.11 2.94 9.67 14.03 56.54 13.05 19.48 22.23 3.85 14.48 12.08 38.73 11.13 36.09 57.03 34.78 30.17 40 E13a_E14a KnownJunction 0 3.04 15.06 25.58 15.58 7.98 13.40 10.38 6.20 8.16 18.80 67.44 6.60 26.30 14.48 0.00 23.24 17.48 71.59 3.58 46.85 65.73 84.99 50.02 41 I13_SR1 SilentIntronRegion 0 6.05 4.22 13.73 3.80 1.76 0.60 5.40 2.13 2.49 2.15 2.36 5.96 9.34 1.80 0.39 1.34 2.07 2.99 2.11 4.12 1.02 0.89 0.73 42 I13_AR1 ActiveIntronRegion 0 19.81 4.84 31.12 8.74 4.65 1.74 8.44 3.22 2.02 3.71 2.75 9.30 7.16 1.47 1.19 4.84 2.61 3.23 2.49 7.47 2.09 0.33 1.63 43 I13_AR3 ActiveIntronRegion 0 7.45 2.43 8.10 4.53 4.83 3.92 6.71 1.52 4.16 2.86 22.54 5.53 9.32 4.91 0.00 7.75 2.70 5.65 0.48 5.96 4.44 7.30 5.45 44 ER14a ExonRegion 0 3.59 21.67 34.20 21.23 9.32 27.75 28.50 3.73 12.72 18.56 106.02 10.36 28.46 33.29 2.70 30.77 15.25 63.89 28.71 39.94 63.98 38.34 33.68 45 E14a_E15a KnownJunction 0 0.00 0.00 1.45 0.00 4.33 0.00 0.00 0.00 0.00 1.42 11.85 0.00 0.00 0.00 0.00 3.33 0.00 3.65 0.00 6.26 0.00 0.00 0.00 46 E14a_E16a KnownJunction 0 3.78 13.02 20.82 24.57 10.61 36.68 18.11 5.71 10.07 17.94 100.60 5.70 12.82 41.26 0.00 31.87 3.83 67.73 20.61 41.80 39.11 37.78 28.34 47 ER15a ExonRegion 0 0.65 3.11 4.35 3.04 1.22 0.54 6.06 0.79 1.17 2.30 13.55 2.18 4.72 3.85 0.00 5.61 2.96 4.90 0.97 8.54 2.03 3.18 2.69 48 E15_Da NovelBoundary 0 0.00 9.34 10.17 3.63 0.00 2.56 9.89 0.00 4.60 1.64 9.00 5.85 0.00 2.35 0.00 0.00 0.00 4.19 0.00 18.28 5.07 2.45 4.27 49 E16_Aa NovelBoundary 0 6.82 25.92 6.06 18.35 0.00 0.00 8.39 6.65 7.49 4.65 9.74 0.00 0.00 2.47 0.00 0.00 7.48 4.23 0.00 23.84 14.83 2.88 0.00 50 ER16a ExonRegion 0 25.24 40.93 49.01 34.37 28.78 35.44 31.30 9.55 16.74 19.75 87.23 22.02 29.60 25.40 2.89 20.96 11.62 35.58 16.74 33.22 33.60 56.74 33.37 51 ER16b ExonRegion 0 2.12 0.29 0.35 0.19 0.00 0.52 0.38 0.00 0.00 0.00 0.00 8.04 0.00 0.00 0.00 0.00 0.00 1.06 0.00 0.00 0.00 2.38 0.00 52 IG30 Intergenic 0 3.13 49.90 8.35 41.76 40.29 79.50 42.32 44.39 39.78 61.19 2.09 1.73 1.25 0.71 0.11 1.01 1.51 131.77 10.93 61.12 2.65 2.88 1.46 53 IG30_SR1 SilentIntergenicRegion 0 1.34 10.22 5.06 7.70 10.57 5.79 5.16 0.99 5.09 8.16 10.48 9.22 6.03 2.25 0.65 1.24 2.09 20.06 1.96 11.11 3.96 6.94 3.72 54 IG30_AR1 ActiveIntergenicRegion 0 3.88 10.87 5.81 6.46 4.42 6.35 5.50 2.16 6.15 6.44 8.91 7.44 2.82 2.21 0.30 2.02 1.54 17.85 2.33 14.82 9.37 7.32 3.40 55 IG30_AR3 ActiveIntergenicRegion 0 4.65 67.14 12.44 67.37 64.07 123.32 63.67 67.50 57.97 88.76 1.46 1.41 0.90 0.57 0.00 1.18 1.63 178.02 15.49 81.13 2.40 1.81 1.52 56 IG30_SR3 SilentIntergenicRegion 0 1.10 57.48 2.83 21.65 24.98 62.90 33.86 38.52 39.05 63.66 1.51 0.49 0.96 0.67 0.39 0.71 2.04 172.44 10.44 78.58 1.95 2.50 1.05