Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RP11-445P19.1 Gene 0 0.66 6.73 4.16 1.47 2.77 0.00 15.20 2.40 1.14 3.89 12.00 0.00 0.00 5.24 1.82 3.69 0.00 7.22 5.60 19.37 0.00 0.00 0.00 2 444887 Transcript 0 0.00 1.49 0.53 0.00 0.00 0.00 2.68 0.49 0.32 0.22 0.04 0.00 0.00 1.16 0.00 1.01 0.00 0.32 0.00 3.62 0.00 0.00 0.00 3 427337 Transcript 0 0.53 2.04 2.81 1.02 3.35 0.00 11.69 1.94 0.23 1.72 11.36 0.00 0.00 3.36 0.81 2.99 0.00 2.66 0.80 11.79 0.00 0.00 0.00 4 ER1a ExonRegion 0 0.00 2.03 1.07 0.00 0.00 0.00 0.81 0.98 0.00 0.45 0.08 0.00 0.00 0.00 0.00 0.00 0.00 0.64 0.00 1.67 0.00 0.00 0.00 5 ER1b ExonRegion 0 1.10 19.63 7.44 2.11 1.45 0.00 12.21 3.79 3.72 10.10 9.63 0.00 0.00 7.14 3.20 3.09 0.00 20.99 24.02 29.48 0.00 0.00 0.00 6 E1a_E2a KnownJunction 0 0.00 0.00 1.12 0.00 0.00 0.00 11.66 0.00 0.00 2.98 4.37 0.00 0.00 4.89 0.00 0.00 0.00 5.60 4.80 2.75 0.00 0.00 0.00 7 ER2a ExonRegion 0 0.00 3.88 3.59 0.85 4.65 0.00 14.56 0.00 0.62 1.79 11.07 0.00 0.00 3.37 2.07 1.71 0.00 3.36 0.68 12.92 0.00 0.00 0.00 8 E2_Da KnownBoundary 0 0.00 6.58 0.00 0.00 0.00 0.00 10.82 0.00 1.59 0.00 0.00 0.00 0.00 7.12 0.00 3.93 0.00 2.40 0.00 14.38 0.00 0.00 0.00 9 E2a_E3a KnownJunction 0 0.00 0.00 1.39 0.00 3.48 0.00 2.25 0.00 0.00 0.00 4.90 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 ER2b ExonRegion 0 0.00 0.95 0.00 0.00 0.00 0.00 4.56 0.00 0.63 0.00 0.00 0.00 0.00 2.32 0.00 2.02 0.00 0.00 0.00 5.57 0.00 0.00 0.00 11 E2_Db NovelBoundary 0 0.00 14.01 12.83 17.18 0.00 0.00 16.52 4.35 0.00 4.38 7.37 0.00 0.00 0.00 0.00 4.44 0.00 5.10 9.51 21.03 0.00 0.00 0.00 12 I2 Intron 0 0.80 6.05 3.59 2.18 1.51 0.08 11.00 2.29 0.66 1.67 9.00 0.71 0.00 5.83 0.70 5.58 0.00 2.39 3.32 15.88 0.00 0.05 0.00 13 I2_AR1 ActiveIntronRegion 0 0.00 5.59 2.36 1.08 0.48 0.00 13.20 1.85 0.33 0.63 8.63 1.42 0.00 6.49 0.37 4.71 0.00 0.66 2.86 12.90 0.00 0.00 0.00 14 I2_SR3 SilentIntronRegion 0 1.58 7.16 3.09 2.55 1.84 0.13 10.78 1.60 1.04 1.37 9.18 0.83 0.00 5.48 0.44 5.28 0.00 4.65 4.31 17.74 0.00 0.00 0.00 15 I2_AR3 ActiveIntronRegion 0 2.28 11.91 2.76 1.66 2.52 0.26 12.39 2.06 1.70 2.65 14.30 0.48 0.00 5.15 0.58 7.75 0.00 0.92 6.37 21.65 0.00 0.00 0.00 16 I2_SR4 SilentIntronRegion 0 0.59 5.61 3.89 2.47 1.54 0.10 11.96 3.18 0.49 1.84 9.97 0.59 0.00 6.32 1.10 6.89 0.00 2.73 3.35 16.05 0.00 0.12 0.00 17 E3_Aa NovelBoundary 0 0.00 6.38 10.17 3.20 3.65 0.00 8.74 6.70 1.45 3.12 11.48 0.00 0.00 0.00 0.00 7.69 0.00 0.00 0.00 15.53 0.00 0.00 0.00 18 ER3a ExonRegion 0 1.06 4.09 4.23 2.04 3.23 0.00 21.12 3.88 0.46 3.44 17.82 0.00 0.00 6.71 1.63 5.97 0.00 5.32 1.60 23.57 0.00 0.00 0.00 19 IG32_SR1 SilentIntergenicRegion 0 0.55 1.59 0.81 1.59 2.09 0.00 16.12 1.35 0.96 1.03 7.27 0.00 0.00 5.57 2.04 3.65 0.00 0.50 3.53 11.04 0.00 0.00 0.00 20 IG32_AR1 ActiveIntergenicRegion 0 0.00 0.00 5.95 2.92 0.00 0.00 17.97 4.20 0.00 3.44 15.46 0.00 0.00 0.00 0.00 8.07 0.00 2.11 3.19 21.28 0.00 0.00 0.00 21 IG32_SR2 SilentIntergenicRegion 0 2.67 13.96 9.98 6.23 4.24 0.15 21.96 8.30 0.66 4.12 9.74 0.76 0.00 6.36 3.12 7.53 0.00 6.66 6.66 16.96 0.00 0.00 0.24 22 IG32_AR2 ActiveIntergenicRegion 0 2.91 10.28 14.42 5.87 3.29 0.00 12.67 9.59 1.32 1.85 8.06 0.00 0.00 3.60 5.65 9.57 0.00 8.92 5.29 17.77 0.00 0.00 0.00