Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 MR1 Gene 0 38.90 2.33 3.88 6.10 20.80 9.33 9.36 7.80 11.01 4.68 110.78 99.57 138.07 144.15 137.47 160.23 100.49 2.46 2.12 3.87 49.94 20.99 21.81 2 486453 Transcript 0 14.09 0.00 0.00 1.58 2.73 6.84 1.82 0.41 1.83 0.47 16.28 2.53 4.19 37.88 39.59 45.88 27.85 0.00 0.00 0.39 19.46 5.47 17.66 3 434571 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 367579 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 282990 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 367580 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 438435 Transcript 0 0.62 0.05 1.55 0.29 0.82 0.00 0.39 0.02 0.01 0.00 1.39 1.93 2.78 6.27 0.43 5.47 0.97 0.98 0.00 0.01 0.65 0.29 0.87 8 367578 Transcript 0 42.91 2.35 0.58 2.58 19.56 6.87 9.95 3.57 3.94 2.54 18.61 24.39 39.89 27.10 29.04 36.96 18.43 0.91 2.80 5.97 4.36 3.80 8.71 9 ER1a ExonRegion 0 24.21 0.00 0.00 1.36 3.26 12.32 1.99 0.49 2.12 0.07 22.47 1.89 1.47 64.15 65.19 65.76 44.67 0.00 0.00 0.33 34.85 9.83 33.13 10 E1_Ac KnownBoundary 0 21.93 0.00 0.00 2.03 0.00 10.96 2.25 0.00 0.00 0.00 12.32 0.00 0.00 35.14 42.15 33.07 33.19 0.00 0.00 0.00 33.17 3.12 37.47 11 E1_Ad KnownBoundary 1 307.76 0.00 1.54 7.36 59.68 65.19 41.95 7.85 18.34 4.11 317.03 6.30 68.34 490.73 336.73 776.63 431.88 0.00 0.00 3.26 182.31 98.46 147.34 12 ER1b ExonRegion 1 113.69 0.00 0.00 4.28 17.58 37.46 10.78 3.70 12.53 2.29 118.46 4.33 6.03 332.94 301.73 345.62 224.93 0.00 0.00 2.13 113.96 41.97 99.43 13 ER1c ExonRegion 1 182.02 0.00 0.20 6.36 36.12 44.01 26.70 6.77 14.20 2.39 221.96 8.66 41.82 507.27 446.79 554.30 351.82 0.00 0.00 2.13 160.32 62.85 122.85 14 ER1d ExonRegion 1 154.71 0.04 1.23 7.73 29.28 33.01 22.41 6.91 15.68 3.75 189.61 16.24 54.12 289.09 224.90 432.73 286.29 0.00 0.00 1.10 121.33 42.27 69.35 15 E1a_E2a KnownJunction 0 0.00 0.00 1.57 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 E1a_E3a KnownJunction 1 18.74 0.00 0.00 4.79 0.00 11.02 4.11 3.41 7.49 2.66 30.64 54.47 98.53 30.02 34.86 30.42 47.22 0.00 0.00 0.00 20.94 5.39 8.62 17 ER2a ExonRegion 0 1.86 0.16 1.33 0.87 2.47 0.00 1.16 0.07 0.04 0.01 4.17 5.79 8.33 4.38 1.30 4.61 2.90 0.46 0.00 0.02 1.94 0.88 2.61 18 E2a_E3a KnownJunction 0 0.00 0.00 1.74 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12.18 0.00 11.79 0.00 2.49 0.00 0.00 0.00 0.00 0.00 19 ER3a ExonRegion 1 14.48 4.29 3.43 6.38 12.66 13.58 7.25 6.90 17.32 7.66 158.61 40.47 70.57 182.28 185.39 199.84 156.77 5.38 3.73 6.83 86.49 28.19 36.67 20 E3_Da KnownBoundary 0 6.08 3.03 5.41 6.96 3.57 5.45 4.50 6.74 8.10 11.34 7.21 6.15 39.12 11.95 13.35 43.32 31.70 10.20 4.80 17.32 14.83 5.57 16.73 21 E3a_E4a KnownJunction 0 23.19 0.00 2.99 0.00 26.57 33.16 30.07 2.55 16.81 2.55 158.30 123.94 89.44 173.05 201.25 134.58 132.40 2.20 0.00 0.00 105.52 21.49 12.38 22 E3a_E4b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23 ER3b ExonRegion 0 3.97 0.00 0.00 1.79 2.20 1.36 1.65 0.34 1.54 0.87 10.10 3.17 6.92 11.61 13.99 26.00 11.03 0.00 0.00 0.45 4.08 1.10 2.19 24 ER4a ExonRegion 0 56.06 2.99 5.91 7.00 17.06 14.33 15.45 5.35 27.82 8.24 214.28 97.35 147.56 241.09 244.71 253.83 164.66 10.92 2.08 6.02 104.81 30.84 35.63 25 E4_Ab KnownBoundary 0 65.64 0.00 14.93 12.05 15.37 18.80 26.23 9.69 26.24 12.49 199.47 135.34 204.05 267.65 301.26 288.21 184.67 6.72 8.66 9.08 131.52 39.31 58.56 26 ER4b ExonRegion 0 86.69 0.96 6.90 13.46 32.66 24.66 9.61 20.00 23.80 13.59 242.15 143.86 248.10 295.02 249.84 333.03 209.77 4.98 3.78 2.64 110.44 43.53 45.48 27 E4_Da KnownBoundary 0 25.19 0.00 0.00 3.46 12.56 0.00 2.25 8.71 3.53 1.67 17.43 0.00 32.14 17.36 40.30 23.50 16.74 0.00 0.00 0.00 8.46 3.00 0.00 28 E4a_E5a KnownJunction 0 43.49 2.76 1.27 9.76 7.89 2.90 7.60 13.10 8.13 2.42 77.91 60.17 66.55 121.14 92.71 101.43 73.77 0.00 0.00 0.00 37.19 13.72 3.76 29 E4a_E6a KnownJunction 1 40.97 0.00 3.55 17.81 18.51 21.35 1.68 6.20 20.25 4.08 98.24 130.39 347.70 133.50 163.05 237.12 106.59 2.57 0.00 0.00 71.04 78.26 49.00 30 ER4c ExonRegion 0 21.81 0.00 0.31 2.08 8.48 1.37 3.52 6.27 3.83 0.80 26.47 15.26 28.78 31.35 32.21 37.38 18.97 0.00 0.00 0.00 3.85 2.15 0.00 31 E4_Db KnownBoundary 0 56.90 0.00 1.36 0.00 7.72 2.16 4.24 1.68 2.98 1.42 19.85 25.06 19.97 12.30 10.75 31.27 11.31 0.00 0.00 0.00 0.00 2.39 0.00 32 ER4d ExonRegion 0 42.91 2.35 0.58 2.58 19.56 6.87 9.95 3.57 3.94 2.54 18.61 24.39 39.89 27.10 29.04 36.96 18.43 0.91 2.80 5.97 4.36 3.80 8.71 33 E4_Dc NovelBoundary 0 16.67 0.00 0.00 0.00 19.27 0.00 0.00 0.00 0.00 0.00 4.47 12.60 12.50 2.24 18.17 17.26 3.83 0.00 0.00 0.00 0.00 0.00 0.00 34 I4 Intron 0 26.36 0.00 0.69 3.16 17.96 4.63 2.20 5.12 3.16 0.37 15.88 25.15 50.91 27.70 29.22 39.41 15.59 0.00 0.00 0.57 2.48 2.24 4.57 35 I4_SR1 SilentIntronRegion 0 31.40 0.00 0.99 1.06 20.87 5.05 4.24 3.03 1.92 0.59 10.36 26.24 69.60 22.15 34.25 30.76 10.37 0.00 0.00 0.38 0.80 1.88 5.31 36 I4_AR1 ActiveIntronRegion 0 26.55 0.00 0.49 4.54 18.49 5.03 1.40 6.31 4.22 0.27 18.08 26.32 45.59 30.73 28.78 47.05 19.34 0.00 0.00 0.60 3.54 2.40 3.99 37 I4_SR2 SilentIntronRegion 0 12.30 0.00 0.88 1.56 7.90 1.75 1.10 4.94 0.68 0.63 24.67 19.89 33.50 35.11 17.68 28.59 14.23 0.00 0.00 2.13 2.20 2.08 4.61 38 E5_Aa NovelBoundary 0 35.34 0.00 4.85 0.00 15.70 5.56 2.16 1.56 1.36 0.00 4.69 17.86 34.41 14.48 4.45 15.12 12.81 0.00 0.00 0.00 0.00 2.33 3.50 39 ER5a ExonRegion 0 41.11 1.42 5.14 6.23 27.27 8.31 4.81 8.10 9.46 2.09 118.58 149.19 199.53 177.39 187.72 228.01 98.37 0.00 0.00 0.00 47.05 15.94 19.01 40 E5a_E6a KnownJunction 1 26.89 0.00 1.57 2.06 3.74 0.00 4.50 2.55 9.20 1.58 82.23 145.55 360.85 142.50 177.14 291.72 86.77 0.00 0.00 0.00 57.21 19.29 12.98 41 E6_Aa NovelBoundary 0 10.15 0.00 1.33 0.00 8.49 0.00 0.00 4.31 0.00 0.00 7.42 17.41 19.80 21.72 21.88 48.28 20.94 0.00 0.00 0.00 2.47 3.12 11.95 42 ER6a ExonRegion 0 49.85 3.14 11.90 14.12 25.71 9.01 8.61 20.45 28.33 11.97 257.26 299.97 439.75 359.41 439.58 450.94 274.04 0.56 0.00 0.69 142.36 65.11 54.43 43 E6a_E7a KnownJunction 0 61.42 9.67 4.38 11.65 38.54 13.46 14.26 13.84 18.61 8.62 299.60 199.57 396.56 254.93 391.50 397.08 291.82 0.00 0.00 3.07 157.47 39.37 37.73 44 E7_Aa NovelBoundary 0 43.49 0.00 0.00 0.00 7.13 0.00 2.03 0.00 1.50 0.00 2.63 18.91 33.11 2.24 0.00 8.72 16.46 0.00 0.00 0.00 2.72 0.00 7.51 45 ER7a ExonRegion 0 60.78 4.88 7.56 13.77 23.95 13.60 12.00 12.47 17.25 6.38 274.66 225.85 314.31 292.50 314.54 331.49 227.21 0.00 0.00 0.60 139.38 60.56 41.95 46 E7_Da KnownBoundary 0 154.03 0.00 10.53 18.68 19.44 33.90 14.53 17.05 19.70 8.22 312.29 167.45 359.55 319.03 268.37 457.91 288.08 0.00 0.00 0.00 145.24 120.57 61.89 47 ER7b ExonRegion 0 77.12 0.00 8.10 8.80 37.16 18.74 11.68 15.66 22.21 5.20 244.69 230.40 421.51 299.71 341.00 330.69 243.41 0.63 0.00 0.45 92.52 51.06 46.05 48 E7_Db KnownBoundary 0 60.83 0.00 5.32 12.49 23.09 12.32 30.69 14.33 15.19 4.00 240.80 222.07 344.30 311.67 357.75 341.36 200.56 0.00 0.00 0.00 92.30 45.50 38.07 49 ER7c ExonRegion 0 31.50 3.94 6.21 8.66 26.33 8.22 12.63 11.11 12.67 6.30 144.43 165.49 184.56 192.44 152.41 186.15 116.86 4.63 3.62 5.69 62.88 27.27 21.73 50 IG13_SR1 SilentIntergenicRegion 0 10.35 0.29 2.05 1.40 11.04 3.40 3.13 5.33 6.53 2.92 59.56 66.33 113.86 97.47 82.96 84.26 67.01 0.29 0.00 0.00 48.09 11.42 9.47 51 IG13_AR1 ActiveIntergenicRegion 0 12.90 0.13 2.27 1.50 17.02 6.59 3.38 4.79 6.79 2.23 39.83 63.52 101.01 58.62 51.00 50.34 35.92 0.23 0.10 0.20 17.18 12.36 7.78 52 IG13_AR2 ActiveIntergenicRegion 0 31.56 0.32 2.90 3.51 18.04 6.76 3.99 4.80 6.06 1.22 19.47 21.98 27.95 21.70 38.43 30.69 19.53 0.11 0.13 0.34 9.08 7.52 6.06 53 IG13_AR4 ActiveIntergenicRegion 0 1.13 0.00 0.00 0.00 0.00 0.00 0.62 0.00 1.24 0.00 4.90 13.28 4.06 3.25 5.80 1.59 9.90 0.00 0.00 0.00 0.00 0.00 0.00 54 IG13_AR5 ActiveIntergenicRegion 0 4.23 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.24 0.00 3.33 9.62 4.69 4.06 1.77 0.00 16.14 0.00 0.00 0.00 0.00 0.00 0.00 55 IG13_AR6 ActiveIntergenicRegion 0 4.23 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.24 0.00 0.71 5.47 4.44 4.87 0.00 0.00 13.20 0.00 0.00 0.00 0.00 0.00 0.00 56 IG13_AR7 ActiveIntergenicRegion 0 1.65 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.03 0.00 1.61 10.10 0.00 4.33 0.00 0.00 16.32 0.00 0.00 0.00 0.00 0.00 0.00