Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 FAM163A Gene 0 4.60 147.42 324.66 253.34 96.43 111.75 123.89 215.27 257.96 343.15 0.00 0.00 0.00 0.05 0.00 0.00 0.12 487.22 99.80 392.90 0.00 0.47 0.10 2 341785 Transcript 0 2.20 55.86 175.13 121.90 29.27 47.27 43.82 105.46 139.83 193.57 0.00 0.00 0.00 0.01 0.00 0.00 0.02 312.91 57.59 262.90 0.00 0.67 0.01 3 IG47 Intergenic 0 0.23 3.79 6.01 3.34 2.05 5.03 4.21 1.98 6.26 11.25 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.38 7.34 30.10 0.00 0.00 0.00 4 IG47_AR1 ActiveIntergenicRegion 0 0.29 4.71 7.46 4.15 2.55 6.25 5.23 2.46 7.31 13.43 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.15 8.70 37.28 0.00 0.00 0.00 5 ER1a ExonRegion 0 0.41 14.43 19.09 11.05 4.73 11.29 15.43 10.75 14.37 26.91 0.00 0.00 0.00 0.00 0.00 0.00 0.00 77.09 18.21 75.13 0.00 0.00 0.00 6 E1a_E2a KnownJunction 0 0.00 6.18 12.86 16.31 8.66 5.00 6.62 10.60 14.87 29.84 0.00 0.00 0.00 0.00 0.00 0.00 0.00 118.60 8.38 72.42 0.00 0.00 0.00 7 I1 Intron 0 0.63 24.97 31.16 37.92 17.71 7.68 46.73 27.33 37.24 37.67 0.00 0.00 0.01 0.00 0.00 0.00 0.00 67.50 15.05 100.87 0.01 0.04 0.09 8 I1_SR1 SilentIntronRegion 0 0.70 25.85 29.61 44.18 20.07 7.58 50.05 29.66 36.48 35.25 0.00 0.00 0.01 0.00 0.00 0.00 0.00 57.47 15.32 95.66 0.02 0.02 0.11 9 I1_SR2 SilentIntronRegion 0 0.62 21.29 30.89 33.33 13.98 7.15 47.81 33.63 40.53 45.86 0.00 0.00 0.00 0.00 0.00 0.00 0.03 82.15 16.31 112.24 0.00 0.00 0.09 10 I1_AR3 ActiveIntronRegion 0 0.00 23.18 21.17 36.17 14.88 7.25 52.98 19.32 30.55 27.94 0.00 0.00 0.00 0.00 0.00 0.00 0.00 50.04 11.36 108.31 0.00 0.00 0.44 11 I1_AR4 ActiveIntronRegion 0 0.17 24.19 46.60 61.65 18.24 21.47 41.91 41.98 42.48 46.78 0.00 0.00 0.00 0.00 0.00 0.00 0.00 57.52 13.92 122.45 0.00 1.43 0.00 12 I1_SR3 SilentIntronRegion 0 0.66 28.39 31.15 33.97 18.49 6.25 47.67 23.15 34.52 33.85 0.00 0.00 0.02 0.00 0.00 0.00 0.00 62.96 13.08 103.88 0.00 0.07 0.07 13 I1_AR5 ActiveIntronRegion 0 0.49 21.69 45.58 48.42 20.66 9.92 50.84 26.36 53.54 51.64 0.00 0.00 0.00 0.00 0.00 0.00 0.00 105.53 20.15 134.84 0.00 0.20 0.57 14 I1_SR4 SilentIntronRegion 0 0.36 21.14 33.40 35.14 14.63 9.92 39.99 22.72 38.65 40.25 0.00 0.00 0.00 0.03 0.00 0.00 0.00 84.04 16.08 101.05 0.00 0.05 0.00 15 I1_AR6 ActiveIntronRegion 0 1.48 33.54 57.69 42.79 23.90 21.45 42.77 47.53 80.88 88.82 0.00 0.00 0.00 0.00 0.00 0.00 0.00 113.09 33.14 126.44 0.00 0.00 0.00 16 I1_SR5 SilentIntronRegion 0 0.77 20.18 34.67 29.07 13.04 10.95 26.77 27.25 39.20 42.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 76.18 16.15 75.35 0.15 0.00 0.00 17 E2_Aa NovelBoundary 0 3.78 20.65 64.13 53.61 44.31 5.17 31.89 35.94 65.36 66.43 0.00 0.00 0.00 0.00 0.00 0.00 0.00 139.41 19.20 96.77 0.00 0.00 0.00 18 ER2a ExonRegion 0 0.00 35.98 121.07 75.17 14.55 34.24 26.39 75.35 121.80 145.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 231.50 47.50 220.20 0.00 0.76 0.00 19 E2a_E3a KnownJunction 0 0.00 45.52 178.53 101.95 16.38 45.88 30.52 101.17 120.02 184.49 0.00 0.00 0.00 0.00 0.00 0.00 0.00 240.60 46.31 251.64 0.00 3.00 0.00 20 E3a_E4a KnownJunction 0 6.89 39.86 153.96 110.11 15.87 38.33 19.61 87.41 107.81 162.62 0.00 0.00 0.00 0.00 0.00 0.00 0.00 278.65 42.92 241.67 0.00 0.00 0.00 21 ER3a ExonRegion 0 3.17 39.19 200.57 120.18 17.03 43.93 26.42 107.09 136.54 195.18 0.00 0.00 0.00 0.00 0.00 0.00 0.00 236.26 48.07 262.57 0.00 1.70 0.00 22 ER4a ExonRegion 0 4.09 55.86 234.80 163.37 32.67 51.00 45.51 139.63 215.68 277.87 0.00 0.00 0.00 0.00 0.00 0.00 0.00 472.96 78.28 377.93 0.00 0.00 0.00 23 E4a_E5a KnownJunction 0 0.00 94.39 284.64 207.27 40.41 66.78 80.02 170.01 234.89 331.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 616.54 116.62 429.01 0.00 0.00 0.00 24 ER5a ExonRegion 0 5.26 171.29 370.67 291.66 113.15 129.01 143.87 247.17 292.47 389.15 0.00 0.00 0.00 0.06 0.00 0.00 0.14 544.02 112.06 435.56 0.00 0.53 0.12