Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 XPR1 Gene 0 35.34 137.82 48.61 64.49 58.68 179.39 76.06 75.93 235.35 63.62 71.74 86.21 98.43 86.23 62.97 59.52 58.60 120.21 53.19 243.16 41.85 82.21 48.38 2 367590 Transcript 0 18.70 150.91 35.28 53.50 45.31 137.34 56.91 65.96 200.53 53.33 61.69 40.26 66.04 86.27 34.09 41.23 48.64 107.60 41.46 215.87 41.57 51.23 38.87 3 367589 Transcript 0 0.00 15.92 3.61 0.00 0.00 5.22 4.50 2.38 12.12 1.07 10.27 12.60 33.28 19.42 0.00 8.72 0.00 16.29 4.80 32.73 2.41 8.14 3.24 4 498177 Transcript 0 17.79 14.29 5.54 5.60 9.05 29.52 20.71 1.02 12.83 2.40 4.38 5.17 13.12 2.76 6.55 4.02 10.72 12.80 5.69 11.26 3.88 18.59 10.32 5 464817 Transcript 0 2.90 3.61 2.95 3.44 3.24 3.56 4.38 2.29 6.67 0.83 1.40 2.43 4.74 1.93 2.29 3.36 2.91 7.27 3.34 7.20 3.20 6.21 3.55 6 467345 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 ER1a ExonRegion 0 0.00 3.44 0.68 0.99 2.21 12.84 4.66 1.43 3.02 0.16 4.67 0.00 13.42 6.83 6.40 4.10 6.15 15.87 17.24 12.25 7.52 2.30 10.53 8 ER1b ExonRegion 1 7.03 20.59 9.80 8.18 8.62 32.23 19.57 10.62 48.08 14.90 56.53 9.06 25.09 76.64 36.17 54.61 59.61 137.45 61.23 145.44 59.07 46.51 60.21 9 E1a_E2a KnownJunction 1 6.22 25.78 17.86 12.92 4.33 8.06 12.23 24.64 123.15 31.75 56.54 50.87 73.21 64.10 59.95 207.13 88.64 366.32 155.39 275.55 39.48 81.81 233.72 10 ER2a ExonRegion 0 1.06 24.95 14.33 17.48 8.13 27.65 13.75 26.89 108.81 31.28 61.15 53.79 80.72 73.90 57.30 149.41 80.49 314.37 82.02 242.80 61.45 61.78 128.42 11 E2a_E3a KnownJunction 0 0.00 43.02 10.64 23.14 20.29 59.85 16.87 30.31 91.87 40.27 78.86 24.31 60.22 89.41 33.75 88.18 71.62 250.88 46.21 219.17 68.57 50.21 41.91 12 ER3a ExonRegion 0 6.06 32.82 16.69 14.84 26.47 115.78 57.71 28.23 156.05 40.48 129.88 100.34 54.35 136.73 61.58 97.73 114.37 240.50 85.19 294.24 112.22 86.20 79.23 13 E3a_E4a KnownJunction 0 18.67 38.15 19.25 23.87 36.16 86.20 77.20 38.94 170.02 56.65 131.56 149.75 60.06 130.73 81.22 101.60 132.40 181.57 72.94 312.75 120.77 89.52 80.58 14 ER4a ExonRegion 1 10.58 50.69 20.27 24.46 15.16 74.36 45.04 31.13 169.70 41.88 137.22 151.92 76.05 167.95 56.70 114.84 122.68 225.44 71.59 304.63 113.14 87.01 81.23 15 E4a_E5a KnownJunction 0 22.82 47.95 22.65 17.68 38.54 130.21 56.48 32.74 187.32 54.07 117.03 166.40 118.17 201.84 92.47 104.93 97.43 249.96 55.63 297.41 84.45 92.10 109.09 16 ER5a ExonRegion 1 16.14 45.47 21.01 21.28 32.00 129.31 68.38 28.37 189.24 52.21 144.76 194.08 122.28 206.45 66.25 133.43 127.63 253.20 79.42 320.76 97.73 119.65 89.72 17 E5a_E6a KnownJunction 1 17.56 24.80 19.43 24.81 28.61 97.33 87.44 32.74 210.39 56.17 125.29 201.97 157.46 228.44 50.81 135.26 130.53 218.71 99.96 357.55 90.94 137.10 81.18 18 ER6a ExonRegion 1 22.17 50.89 19.26 20.62 23.29 77.26 46.15 28.66 185.47 54.67 134.84 161.99 198.82 224.17 70.15 139.62 133.45 240.67 78.50 330.44 120.44 135.70 91.98 19 E6a_E7a KnownJunction 0 3.63 51.83 21.88 21.21 24.28 60.99 47.21 38.98 211.49 74.11 140.09 233.78 184.08 225.32 80.10 126.63 148.48 255.89 63.53 366.69 110.83 121.79 80.58 20 ER7a ExonRegion 0 14.89 61.73 21.18 17.34 29.34 138.92 95.87 37.67 184.35 65.18 166.02 209.08 161.06 191.47 70.80 109.64 142.74 249.47 82.35 357.68 89.20 124.53 88.71 21 E7a_E8a KnownJunction 1 9.71 69.07 16.32 17.75 37.78 212.78 153.02 30.11 154.83 57.08 118.56 135.64 196.58 203.96 66.75 134.75 154.00 202.42 80.47 363.82 98.66 146.10 88.18 22 ER8a ExonRegion 0 13.51 75.44 25.61 30.98 46.62 131.66 76.39 62.70 222.80 63.52 187.06 176.76 228.66 205.82 73.21 173.43 153.81 282.80 108.17 385.37 100.45 168.75 107.95 23 E8a_E9a KnownJunction 1 21.11 86.83 12.57 33.06 88.88 71.38 94.33 54.59 217.27 66.91 235.90 142.10 232.45 159.16 22.25 143.12 223.38 187.99 70.87 353.91 120.90 140.41 77.85 24 ER9a ExonRegion 1 34.71 169.79 30.87 37.26 47.60 120.57 91.46 66.85 232.86 64.15 183.26 170.48 227.99 199.51 64.79 177.29 145.57 296.44 103.58 392.58 116.64 176.66 104.67 25 E9_Da NovelBoundary 0 0.00 12.70 0.00 5.49 3.74 0.00 9.45 0.00 7.12 1.64 2.68 18.91 6.82 0.00 0.00 7.43 29.36 4.39 4.80 2.56 5.99 0.00 4.10 26 E9a_E10a KnownJunction 1 20.30 242.00 24.48 14.18 14.69 85.86 53.66 56.93 170.25 72.61 112.92 161.15 184.89 190.48 25.96 73.14 95.56 142.48 61.37 286.03 94.83 113.28 51.56 27 ER10a ExonRegion 1 15.66 126.94 29.62 27.53 26.29 81.88 72.06 51.93 176.82 52.52 104.61 126.03 198.43 179.47 56.09 92.40 81.29 134.96 50.35 320.16 84.77 104.52 64.04 28 E10a_E11a KnownJunction 1 9.93 179.44 31.70 24.27 27.59 33.79 58.69 45.63 159.11 65.76 151.20 54.92 118.34 262.23 60.70 50.33 134.55 147.12 65.79 313.45 89.21 96.38 51.56 29 E10a_E12a KnownJunction 0 0.00 15.92 3.61 0.00 0.00 5.22 4.50 2.38 12.12 1.07 10.27 12.60 33.28 19.42 0.00 8.72 0.00 16.29 4.80 32.73 2.41 8.14 3.24 30 ER11a ExonRegion 0 12.73 167.00 24.00 34.02 37.42 114.02 83.00 46.07 196.24 55.24 145.19 111.38 193.90 192.13 68.17 143.34 102.30 223.59 74.53 333.94 118.55 102.89 104.40 31 E11_Ab KnownBoundary 1 16.08 140.30 22.12 34.46 23.77 115.05 96.01 60.01 198.67 70.59 186.42 210.22 126.45 253.11 61.81 276.59 104.63 273.80 94.21 369.70 94.83 103.67 169.28 32 ER11b ExonRegion 0 33.34 94.69 25.18 26.79 24.75 108.57 68.12 42.62 195.96 68.17 169.73 156.60 155.94 217.45 91.25 179.02 118.32 267.72 116.61 364.29 130.64 138.42 89.06 33 E11a_E12a KnownJunction 0 33.56 90.44 25.31 25.84 30.73 96.02 57.76 33.06 217.50 68.47 188.57 155.45 132.95 218.32 81.22 118.52 139.04 222.48 75.77 379.92 136.47 62.15 62.32 34 ER12a ExonRegion 0 32.45 93.83 20.12 22.57 26.71 85.74 49.40 37.36 195.69 64.17 153.55 138.01 181.59 188.20 84.54 134.42 119.47 205.42 81.14 360.54 90.89 122.85 97.42 35 E12_Ab KnownBoundary 0 31.93 82.09 17.68 23.34 36.59 115.73 67.66 46.13 175.26 63.99 164.25 180.96 190.73 155.51 125.72 122.70 131.65 169.83 44.71 415.40 53.81 143.35 116.78 36 ER12b ExonRegion 0 35.11 82.40 24.45 30.89 67.67 149.85 97.48 48.35 208.42 61.98 173.98 167.87 187.22 195.71 94.32 193.97 155.05 283.06 88.70 372.71 107.00 167.51 123.29 37 E12a_E13a KnownJunction 0 39.49 88.01 24.54 43.72 44.48 168.82 101.84 51.59 200.23 58.26 144.72 142.25 319.46 184.41 69.10 170.72 124.54 264.60 90.17 343.87 79.45 136.43 162.02 38 ER13a ExonRegion 0 19.14 56.52 25.95 39.89 35.86 122.58 73.30 56.85 218.77 68.11 167.07 151.53 221.07 209.77 99.72 136.82 157.85 263.75 107.19 391.18 114.64 177.13 118.72 39 E13_Da KnownBoundary 0 11.11 5.92 9.96 3.86 4.33 13.06 4.24 6.37 13.86 4.32 0.00 0.00 6.82 0.00 10.51 0.00 3.83 17.58 0.00 2.94 6.30 12.80 3.59 40 E13a_E14a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 41 E13a_E15a KnownJunction 0 13.04 51.37 24.48 36.99 27.42 160.14 91.81 35.24 166.78 68.01 108.82 141.80 153.72 188.77 126.46 91.17 109.02 244.45 98.17 299.52 114.54 115.12 58.22 42 ER13b ExonRegion 0 17.79 14.29 5.54 5.60 9.05 29.52 20.71 1.02 12.83 2.40 4.38 5.17 13.12 2.76 6.55 4.02 10.72 12.80 5.69 11.26 3.88 18.59 10.32 43 E14_Aa NovelBoundary 0 7.56 3.03 16.91 10.59 3.65 10.45 12.37 11.30 24.62 4.59 5.16 0.00 20.29 4.94 8.90 0.00 13.93 11.94 3.67 28.38 8.96 9.37 0.00 44 ER14a ExonRegion 0 5.81 7.22 5.89 6.88 6.48 7.13 8.76 4.57 13.33 1.66 2.81 4.85 9.48 3.85 4.57 6.72 5.82 14.54 6.68 14.41 6.41 12.42 7.11 45 E14_Da NovelBoundary 0 28.89 3.35 4.64 4.03 3.65 18.51 16.87 2.22 13.14 5.67 2.68 0.00 0.00 0.00 4.45 0.00 8.51 3.94 0.00 10.93 2.72 5.82 0.00 46 E15_Aa NovelBoundary 0 3.78 3.35 1.83 2.66 4.33 12.95 9.67 3.90 9.58 5.72 0.00 6.15 6.01 7.36 0.00 12.30 0.00 20.77 23.62 8.37 3.15 9.00 0.00 47 ER15a ExonRegion 0 29.07 55.01 46.40 38.15 37.61 129.88 83.03 47.24 217.31 73.31 106.25 115.90 211.69 223.11 121.33 136.38 113.39 302.81 98.79 370.98 114.04 129.56 129.93 48 E15a_E16a KnownJunction 0 53.94 70.45 44.76 34.23 43.63 109.31 49.29 37.25 196.70 58.34 89.55 180.81 107.62 225.62 131.90 120.57 71.81 247.48 112.66 328.79 132.08 63.93 72.39 49 ER16a ExonRegion 0 60.81 102.10 64.12 60.38 78.83 190.93 117.05 67.63 239.25 75.19 121.27 173.20 202.38 143.21 143.89 84.30 93.55 111.53 73.15 285.58 51.50 150.09 68.08 50 E16_Da KnownBoundary 1 31.12 180.23 51.03 83.24 56.54 214.14 70.13 94.39 241.14 99.31 24.85 88.83 161.84 69.34 115.58 47.77 7.76 29.51 8.75 231.96 2.84 100.06 16.39 51 ER16b ExonRegion 0 21.62 88.61 25.12 46.04 43.85 174.45 52.69 67.16 208.52 55.28 19.37 32.16 37.84 21.64 25.18 17.98 15.82 64.20 23.20 176.27 9.16 36.88 18.06 52 E16_Ab KnownBoundary 0 31.49 199.11 66.97 125.53 74.45 229.92 61.70 144.09 360.64 94.07 21.95 12.00 19.48 15.25 8.90 24.10 13.09 94.89 39.15 252.54 16.74 58.23 16.30 53 ER16c ExonRegion 0 14.48 124.49 33.70 69.18 53.31 256.24 73.48 98.46 301.13 75.57 25.82 29.88 25.71 17.95 11.78 21.26 15.59 95.24 35.34 218.50 11.55 41.36 22.34 54 E16_Db KnownBoundary 0 12.89 159.91 37.49 65.06 63.16 288.92 101.93 110.37 301.24 81.74 18.00 25.96 14.45 25.84 18.42 26.06 16.74 96.38 27.20 213.36 11.31 37.41 20.83 55 E16b_E16c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 56 ER16d ExonRegion 0 13.31 178.37 31.13 69.13 66.52 202.14 63.45 87.93 280.83 59.25 30.42 23.66 17.80 23.12 18.63 19.95 19.71 125.01 28.00 227.67 17.07 38.00 33.46 57 E16_Ac KnownBoundary 0 21.49 294.09 32.08 71.65 38.88 157.58 44.38 98.99 284.60 66.00 19.11 12.90 6.82 14.36 20.03 35.20 22.16 118.64 27.58 165.03 19.71 22.41 28.17 58 ER16e ExonRegion 0 12.48 314.20 24.15 52.45 57.21 193.08 68.16 78.12 257.28 58.58 13.52 25.00 13.16 12.80 14.54 11.53 9.66 80.04 20.75 147.58 9.39 34.29 16.71 59 E16_Dc KnownBoundary 1 31.71 364.87 40.30 77.61 119.19 271.89 94.51 103.71 300.40 76.53 7.32 84.18 53.24 14.72 27.44 20.59 23.09 31.63 15.81 224.09 0.00 48.44 0.00 60 ER16f ExonRegion 0 54.61 288.60 99.08 146.54 94.29 286.78 78.97 147.53 355.44 84.28 19.32 19.46 14.95 11.68 25.48 11.67 13.32 69.83 40.00 231.61 7.91 30.92 15.20 61 IG10_AR3 ActiveIntergenicRegion 0 0.38 6.39 3.85 1.36 4.20 0.20 3.74 3.46 9.00 4.59 0.48 0.00 16.75 3.65 3.21 0.00 3.30 0.40 9.56 2.28 0.00 0.89 1.47