Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 LAMC1 Gene 0 155.90 30.71 147.33 64.99 124.37 94.79 89.41 111.33 70.01 156.17 173.42 218.54 429.45 345.47 235.09 76.01 18.67 50.87 67.77 46.78 1311.27 1171.66 918.02 2 258341 Transcript 0 103.52 27.37 116.43 52.98 90.04 86.43 73.45 102.39 77.14 155.16 223.53 265.63 513.89 455.06 261.69 96.31 24.08 68.96 74.16 54.16 1728.40 1201.61 1114.03 3 484114 Transcript 0 3.88 1.36 5.11 2.04 1.78 4.59 3.09 4.32 4.94 13.38 26.09 11.06 20.68 59.29 22.24 14.39 2.20 5.54 6.90 5.79 259.30 104.31 99.38 4 479499 Transcript 0 5.53 0.42 1.98 0.82 4.77 0.84 5.01 1.58 0.95 1.59 3.24 8.76 4.97 2.21 6.61 2.65 0.00 0.00 1.96 1.31 10.09 21.44 12.31 5 466964 Transcript 0 2.80 1.05 1.30 0.78 0.83 1.02 0.86 1.53 1.79 1.41 1.23 3.09 10.12 9.23 6.13 4.23 0.09 0.25 2.56 1.72 20.04 15.60 12.18 6 478064 Transcript 0 0.73 0.00 0.95 0.34 0.73 0.71 1.25 0.28 1.17 1.67 6.17 12.50 21.40 0.32 2.63 0.08 0.00 2.90 0.11 0.64 1.62 8.10 7.40 7 495918 Transcript 0 32.97 3.65 5.62 4.93 8.88 10.63 24.09 11.61 2.41 6.29 18.02 47.46 64.34 23.65 18.00 11.66 2.16 3.46 7.39 6.82 41.47 93.12 52.60 8 ER1a ExonRegion 0 2.61 1.89 10.58 2.00 2.12 9.04 3.86 13.02 16.58 31.98 68.73 18.26 52.36 136.95 71.80 27.34 8.17 23.32 14.99 14.77 656.95 191.62 326.58 9 E1a_E3b KnownJunction 0 26.38 0.00 29.45 9.92 4.33 29.87 14.84 25.30 32.26 82.17 174.20 53.27 98.21 354.64 133.01 88.87 12.06 32.13 44.33 42.19 1483.46 648.46 603.52 10 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.02 0.00 0.00 0.00 0.00 0.00 2.87 8.10 0.02 0.00 0.08 0.00 0.00 0.00 1.41 0.00 1.43 0.08 11 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 ER3a ExonRegion 0 11.64 4.07 15.32 6.13 5.35 13.75 9.27 12.96 14.82 40.14 78.28 30.31 53.94 177.84 66.73 43.10 6.60 16.63 20.70 15.96 777.91 311.49 298.07 13 ER3b ExonRegion 0 22.15 10.63 50.13 19.85 26.62 34.34 25.56 47.27 42.14 93.80 165.98 103.12 304.44 361.38 151.12 64.80 23.38 45.76 45.21 47.48 1553.53 814.33 751.15 14 E3a_E4a KnownJunction 0 23.63 11.18 62.51 34.83 35.99 23.11 42.71 68.18 52.81 116.93 92.23 90.33 349.33 265.94 135.36 61.35 29.92 26.86 52.61 48.26 855.68 673.51 509.53 15 ER4a ExonRegion 0 31.42 13.16 43.51 19.70 36.58 31.97 36.73 58.19 58.15 115.64 204.56 178.66 534.74 394.83 153.72 65.09 21.54 36.36 42.65 56.62 1087.07 1108.51 865.82 16 E4a_E5a KnownJunction 0 44.90 12.70 49.50 13.45 40.41 29.19 55.16 55.37 72.37 131.41 169.67 184.86 361.18 545.06 220.29 48.36 12.34 52.31 64.57 51.71 1260.94 960.08 964.86 17 ER5a ExonRegion 0 37.02 11.44 57.42 17.12 32.05 57.04 35.45 55.03 75.99 126.38 268.12 272.43 517.05 476.49 168.06 83.41 17.73 62.63 63.74 66.05 1326.02 1265.56 1029.67 18 E5_Ab KnownBoundary 0 107.20 24.01 70.61 24.14 67.57 101.31 67.17 57.46 81.42 140.73 318.71 295.60 929.32 531.76 219.30 78.95 32.26 58.24 94.87 88.27 1573.10 2022.73 1383.05 19 ER5b ExonRegion 0 55.33 11.59 56.64 18.21 30.82 47.61 36.75 52.61 67.49 121.27 233.22 295.79 684.18 480.19 175.47 62.24 28.26 58.91 48.10 60.89 1576.00 1218.53 1029.18 20 E5_Da NovelBoundary 1 31.34 8.81 30.31 14.15 35.91 12.72 35.60 49.82 46.90 88.21 178.52 196.41 439.74 318.33 85.42 64.34 21.60 55.71 32.00 54.78 1319.69 771.54 744.96 21 E5b_E6a KnownJunction 1 37.04 9.87 47.57 13.65 74.53 48.89 57.01 64.40 66.32 142.50 282.23 280.44 469.29 393.26 109.15 106.55 17.95 73.70 78.50 63.21 1887.30 954.14 1046.98 22 ER5c ExonRegion 1 30.37 5.48 47.42 12.98 51.30 28.54 40.18 54.48 67.02 129.50 245.48 256.57 465.33 382.44 105.33 91.23 16.36 72.46 50.69 59.39 1776.67 883.14 907.55 23 ER6a ExonRegion 1 28.37 8.88 39.66 24.54 37.98 50.95 46.50 42.82 64.62 108.96 204.74 235.35 337.14 436.41 128.85 80.03 19.95 59.11 59.29 63.14 1765.92 942.11 929.36 24 E6a_E7a KnownJunction 1 33.49 16.12 51.30 9.82 19.86 70.75 36.66 56.44 73.76 111.07 134.93 169.26 219.47 445.47 142.90 96.13 34.50 71.71 51.30 58.16 1849.24 844.90 1007.80 25 ER7a ExonRegion 0 33.31 15.63 44.57 23.57 35.51 54.63 39.00 47.50 63.49 107.49 198.34 128.09 273.89 400.51 135.10 71.73 23.27 63.48 55.74 49.77 1820.06 958.95 898.71 26 E7a_E8a KnownJunction 1 44.30 15.00 41.19 32.53 56.11 79.95 47.52 40.79 91.90 113.01 218.79 118.99 345.76 458.53 131.90 97.75 38.99 40.96 30.02 56.31 1885.57 945.20 1005.24 27 ER8a ExonRegion 0 40.21 14.17 49.75 20.17 54.87 63.31 61.99 73.42 76.94 102.71 226.72 243.98 482.69 438.28 152.39 94.21 34.74 58.27 52.25 57.06 1741.38 1080.48 1036.01 28 E8a_E9a KnownJunction 0 48.45 27.36 55.20 25.54 112.99 58.77 66.73 85.23 63.45 132.67 230.80 282.99 446.24 443.35 159.96 127.06 49.09 66.62 116.05 52.60 1768.50 1383.82 1171.01 29 ER9a ExonRegion 0 33.57 9.13 49.01 21.67 48.05 59.86 48.02 73.16 70.10 109.96 229.07 243.52 360.45 418.56 146.44 94.46 35.01 51.06 63.94 43.80 1576.89 1115.03 981.59 30 E9_Da KnownBoundary 0 38.45 3.16 11.03 4.56 16.47 5.68 12.67 0.00 3.50 2.79 15.11 0.00 14.28 12.18 27.07 4.27 0.00 0.00 0.00 0.00 34.41 68.77 36.88 31 E9a_E10a KnownJunction 0 24.82 0.00 56.53 31.53 21.05 99.77 36.61 67.90 57.67 96.11 138.61 232.73 459.06 453.59 175.29 80.49 29.45 38.80 82.45 30.49 1364.17 985.98 949.58 32 ER9b ExonRegion 0 5.53 0.42 1.98 0.82 4.77 0.84 5.01 1.58 0.95 1.59 3.24 8.76 4.97 2.21 6.61 2.65 0.00 0.00 1.96 1.31 10.09 21.44 12.31 33 ER10a ExonRegion 1 26.29 14.40 44.54 23.65 43.70 60.38 46.49 63.85 56.25 104.85 190.40 255.26 392.32 450.09 135.79 89.07 38.51 59.16 62.62 57.10 1660.31 1020.98 960.40 34 E10a_E11a KnownJunction 0 55.94 12.50 53.10 33.60 86.42 66.84 64.65 64.81 80.58 131.06 187.15 249.38 328.55 460.48 167.75 71.09 33.01 65.99 61.74 42.12 1757.26 1023.33 905.70 35 ER11a ExonRegion 0 46.86 11.28 44.78 20.24 43.15 57.55 40.42 63.07 63.13 117.65 214.52 186.14 309.22 453.48 173.45 91.48 33.37 72.37 57.66 45.88 1830.82 1026.24 952.37 36 E11a_E12a KnownJunction 0 49.42 11.58 75.07 30.83 92.61 104.66 41.78 82.76 77.05 156.07 306.29 241.43 488.93 479.55 174.92 104.08 15.61 73.99 66.92 48.83 2114.64 1200.97 1119.96 37 ER12a ExonRegion 0 39.46 9.75 46.47 19.57 68.15 82.37 52.57 52.88 65.60 129.63 236.57 189.27 320.33 483.14 180.85 93.48 31.40 79.63 48.60 44.89 1801.31 1052.71 1015.30 38 E12a_E13a KnownJunction 0 55.05 13.16 56.89 31.53 74.19 73.25 51.32 66.09 60.99 134.12 244.33 187.11 314.27 422.75 147.10 136.80 24.96 74.24 52.90 60.66 1713.64 1260.31 1119.54 39 ER13a ExonRegion 0 47.30 12.02 62.74 32.11 49.50 55.51 42.62 64.25 62.81 124.52 230.44 171.99 262.47 426.36 174.11 106.50 19.33 73.24 57.94 57.00 1774.30 1052.08 1051.89 40 E13a_E14a KnownJunction 0 86.02 8.75 65.99 35.16 81.83 82.91 43.72 84.78 70.60 131.11 220.69 281.94 365.72 516.81 218.80 102.20 14.03 72.50 96.76 60.53 1736.01 967.12 1375.63 41 ER14a ExonRegion 0 48.05 13.47 65.57 27.01 41.71 45.36 41.97 78.91 56.00 110.20 211.10 136.09 218.10 397.43 198.61 94.62 25.66 58.36 63.18 53.96 1844.70 1018.42 978.41 42 E14a_E15a KnownJunction 0 58.83 8.95 99.73 47.15 44.06 54.34 57.81 124.62 58.45 136.83 291.81 170.01 234.56 403.97 208.91 78.10 38.52 83.94 121.79 56.63 2234.55 1352.28 1186.72 43 ER15a ExonRegion 0 48.13 13.38 73.65 33.21 49.50 56.71 40.05 67.31 59.59 137.65 215.50 130.18 240.07 412.55 195.29 101.38 26.27 67.63 75.34 50.42 1755.03 1027.33 1038.58 44 E15a_E16b KnownJunction 0 55.34 15.66 88.20 25.24 53.82 80.58 61.25 63.54 71.87 133.53 179.94 70.67 273.20 371.01 171.58 90.23 8.70 50.99 40.85 42.19 1712.16 915.87 904.25 45 ER16a ExonRegion 0 2.80 1.05 1.30 0.78 0.83 1.02 0.86 1.53 1.79 1.41 1.23 3.09 10.12 9.23 6.13 4.23 0.09 0.25 2.56 1.72 20.04 15.60 12.18 46 E16_Ab KnownBoundary 0 0.00 0.00 0.00 1.50 0.00 5.56 0.00 0.00 1.30 0.00 2.63 0.00 27.27 7.12 0.00 11.45 0.00 0.00 0.00 0.00 16.49 4.96 3.33 47 ER16b ExonRegion 0 54.05 7.95 85.04 36.90 37.22 57.51 37.06 70.40 61.91 120.22 190.22 93.61 178.16 373.12 212.47 79.51 20.19 57.75 57.94 47.42 1676.69 889.61 831.91 48 E16a_E17a KnownJunction 0 42.01 17.17 91.87 36.93 27.59 79.90 31.97 72.62 58.59 92.16 125.51 54.92 161.03 295.60 210.52 52.89 12.06 37.39 28.71 34.13 1626.35 736.70 569.37 49 ER17a ExonRegion 0 44.64 10.58 79.05 33.49 44.42 44.99 34.06 71.65 66.43 109.39 198.07 65.03 144.67 376.30 228.00 72.77 18.03 43.44 40.05 53.21 1677.62 866.28 787.33 50 E17a_E18a KnownJunction 1 53.49 14.93 75.28 38.29 59.85 55.08 43.37 56.89 70.77 106.10 255.49 74.12 264.92 450.76 224.37 64.85 13.09 57.74 71.15 51.20 1686.34 893.58 828.02 51 ER18a ExonRegion 0 62.21 12.81 84.52 35.94 70.74 75.85 50.85 83.55 79.63 114.68 235.95 140.19 430.15 470.10 311.71 96.29 21.04 54.43 63.39 49.29 1870.27 1103.43 1046.54 52 E18a_E19a KnownJunction 1 68.38 18.09 92.58 41.92 64.52 66.44 45.05 80.42 75.17 114.65 195.00 108.64 494.61 386.37 207.80 99.03 26.18 54.18 106.07 41.10 1591.57 1261.96 859.86 53 ER19a ExonRegion 1 57.85 16.27 80.06 32.25 53.51 54.40 43.69 76.63 66.70 100.55 218.42 129.88 581.56 416.32 241.77 97.09 23.11 51.12 83.88 31.91 1632.95 1273.72 916.23 54 ER19b ExonRegion 0 76.02 18.58 104.00 46.25 89.41 79.85 60.10 122.14 89.27 171.76 315.28 277.48 901.20 581.75 366.11 117.47 31.23 65.09 80.65 65.49 2223.69 1521.46 1251.14 55 E19_Da KnownBoundary 1 65.34 19.86 88.91 67.06 73.51 64.17 67.83 112.09 76.47 163.32 212.47 188.46 1001.56 492.56 312.38 119.28 37.59 71.05 67.11 62.96 1547.96 1515.28 1198.07 56 E19_Db KnownBoundary 0 0.00 0.00 5.44 0.00 3.74 0.00 2.25 0.00 1.33 4.06 4.79 0.00 19.15 0.00 0.00 0.00 0.00 6.01 0.00 2.88 0.00 13.96 20.74 57 E19b_E20a KnownJunction 1 132.84 30.98 106.86 90.17 120.63 106.36 52.60 136.20 83.97 178.58 271.12 517.22 1701.02 535.64 385.32 187.90 40.49 91.32 107.77 91.79 1750.96 1704.13 2035.40 58 ER19c ExonRegion 1 92.26 21.91 102.43 78.68 100.58 83.52 62.47 126.65 85.34 179.54 272.28 365.45 1464.57 557.00 341.29 171.03 42.31 91.88 95.27 80.17 1862.94 1711.80 1798.03 59 ER19d ExonRegion 0 1.45 0.00 1.91 0.68 1.45 1.41 2.50 0.57 2.35 3.34 9.66 13.30 27.87 0.65 5.26 0.17 0.00 5.81 0.23 1.28 3.24 16.19 14.81 60 E19c_E20a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.68 11.70 14.93 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 61 ER20a ExonRegion 1 121.47 45.44 132.17 72.73 121.27 109.27 91.63 137.88 86.59 218.44 297.51 451.90 1368.49 572.51 411.27 128.77 31.70 86.80 97.71 76.82 2306.40 1998.69 1550.29 62 E20a_E21a KnownJunction 1 226.78 47.62 182.73 106.01 223.94 175.81 139.47 146.43 74.80 215.24 355.56 669.52 2395.46 648.95 638.24 139.62 33.19 98.20 190.78 87.50 2812.85 2923.72 2212.01 63 ER21a ExonRegion 1 156.81 29.56 159.74 82.45 120.54 97.83 103.43 112.46 69.35 198.30 268.43 488.90 1750.85 582.92 415.46 113.09 23.19 56.40 109.34 61.99 2404.99 1916.68 1301.67 64 E21a_E22a KnownJunction 1 189.00 28.55 182.02 74.42 145.67 97.33 127.37 181.38 85.30 220.05 223.79 471.60 1322.48 653.37 501.27 117.49 20.76 52.44 127.53 50.88 2315.35 2000.93 1297.69 65 ER22a ExonRegion 0 177.66 42.54 206.69 99.50 166.09 124.49 128.01 187.60 85.03 189.25 309.15 482.05 1292.61 558.29 424.36 114.97 28.58 58.03 81.34 74.27 2209.01 1632.71 1197.72 66 E22a_E23a KnownJunction 0 236.86 97.88 227.34 105.11 215.62 162.18 149.18 212.39 96.44 236.14 360.04 608.75 1631.71 781.45 569.01 145.77 16.83 75.24 60.80 83.16 2417.22 2091.98 1404.65 67 ER23a ExonRegion 1 163.45 50.92 180.59 80.02 144.59 129.91 130.08 197.82 96.15 213.92 287.14 528.62 1585.20 633.16 454.17 129.95 22.66 71.03 100.83 71.88 2162.44 1780.06 1419.15 68 E23_Da NovelBoundary 0 110.02 21.77 111.59 46.51 79.63 44.12 84.84 104.20 52.20 125.71 109.40 234.23 701.09 201.43 190.62 58.53 11.13 44.15 23.06 33.75 1075.11 682.75 632.54 69 E23b_E24a KnownJunction 1 191.74 77.22 198.78 71.72 143.55 111.87 132.66 197.65 117.71 236.68 261.01 604.40 1122.82 664.14 473.21 99.03 8.60 78.35 69.27 64.62 1775.11 1298.09 1283.69 70 ER23b ExonRegion 1 158.39 55.75 181.56 70.64 133.56 100.40 126.44 180.62 106.84 227.28 265.29 570.05 1186.58 606.34 392.88 102.29 12.38 76.84 67.42 68.26 1880.13 1337.97 1251.99 71 E24_Ab NovelBoundary 0 253.82 47.62 197.33 77.05 161.80 190.74 125.42 213.01 115.16 225.64 356.25 619.10 1340.82 859.50 497.19 126.21 20.94 63.84 86.97 99.01 2228.80 2271.03 1451.26 72 ER24a ExonRegion 0 177.24 57.79 188.19 67.62 137.76 139.66 115.14 190.02 114.55 220.17 334.14 565.90 1125.15 742.27 462.80 104.31 14.48 72.60 77.99 75.63 1982.34 1753.32 1356.26 73 ER24b ExonRegion 0 190.82 30.55 177.72 63.22 131.72 137.63 114.77 165.35 101.10 204.59 318.96 494.61 1378.51 709.75 511.94 143.64 25.13 97.36 102.39 79.83 2014.06 1771.18 1492.70 74 E24a_E25a KnownJunction 0 170.33 20.39 222.97 67.09 133.79 93.87 89.78 134.02 117.53 202.62 282.18 626.45 1186.12 537.88 531.31 136.97 25.25 77.77 136.57 72.67 2032.17 1526.80 1516.56 75 ER25a ExonRegion 0 135.48 24.46 165.63 60.78 116.34 106.89 95.49 147.29 96.22 182.28 290.47 539.64 889.27 590.49 466.42 115.47 35.13 69.20 69.41 75.98 2188.67 1308.16 1284.26 76 E25a_E26a KnownJunction 0 277.46 46.11 168.00 57.57 207.81 148.49 162.65 140.68 98.99 210.79 270.44 463.80 1136.45 663.96 436.12 122.45 24.22 75.65 84.61 94.53 2177.59 1584.11 1777.86 77 ER26a ExonRegion 0 184.84 35.30 158.75 55.64 122.04 104.61 103.75 124.04 89.99 166.54 213.00 344.26 753.05 494.32 489.48 107.98 32.10 68.01 81.70 51.26 1994.31 1291.49 1228.82 78 E26a_E27a KnownJunction 0 333.32 30.65 188.17 83.64 118.42 113.63 181.02 133.94 104.08 206.06 310.29 191.91 646.22 485.85 421.91 117.41 41.33 92.15 102.69 70.50 2133.60 1371.26 1500.00 79 ER27a ExonRegion 0 326.57 51.21 208.84 90.30 147.08 138.63 122.10 158.42 99.37 204.32 288.28 271.04 663.01 516.59 558.28 115.54 35.85 89.19 104.48 63.68 2047.48 1664.16 1384.75 80 E27_Da KnownBoundary 0 18.23 2.96 11.44 5.63 12.14 18.40 14.88 17.13 8.07 11.85 14.90 18.46 68.99 22.07 10.38 0.00 0.00 1.95 8.28 0.00 50.16 67.97 26.80 81 E27a_E28a KnownJunction 0 250.19 71.43 269.80 123.93 117.06 136.80 131.60 142.40 127.81 243.26 223.64 225.97 461.50 388.67 477.53 66.31 36.37 87.76 107.58 63.21 1977.74 1625.38 1091.96 82 ER27b ExonRegion 0 32.97 3.65 5.62 4.93 8.88 10.63 24.09 11.61 2.41 6.29 18.02 47.46 64.34 23.65 18.00 11.66 2.16 3.46 7.39 6.82 41.47 93.12 52.60 83 I27 Intron 0 14.83 3.07 7.28 5.91 11.83 6.52 18.13 9.44 10.12 6.45 15.42 51.53 136.80 18.84 12.60 4.81 0.00 1.79 2.75 7.57 10.45 99.53 17.73 84 I27_SR1 SilentIntronRegion 0 14.90 3.08 7.32 5.94 11.88 6.55 18.21 9.48 10.16 6.48 15.49 51.75 137.38 18.91 12.66 4.83 0.00 1.80 2.76 7.60 10.49 99.95 17.80 85 Ix Intron 0 43.99 9.60 10.17 6.97 12.83 8.51 13.33 13.70 8.28 9.52 15.11 38.83 63.83 21.33 19.26 6.58 1.65 2.07 1.25 4.03 19.27 80.59 24.33 86 Ix_AR1 ActiveIntronRegion 0 67.19 11.23 14.46 10.44 19.06 10.22 16.08 19.01 11.92 14.56 19.49 45.98 80.68 24.55 24.64 7.08 0.76 2.00 1.47 4.63 16.03 102.57 22.33 87 Ix_SR2 SilentIntronRegion 0 43.81 3.03 6.12 2.20 11.80 6.83 5.82 5.75 7.54 3.18 18.58 47.78 86.85 19.61 22.53 5.53 0.00 0.00 0.00 2.38 12.22 74.29 25.02 88 E28_Aa NovelBoundary 0 50.90 18.35 22.41 11.62 12.31 21.41 40.32 38.45 15.10 8.38 28.43 31.51 93.34 27.25 15.45 3.76 0.00 6.14 0.00 5.43 79.26 56.52 22.62 89 ER28a ExonRegion 0 241.16 50.31 262.39 114.56 174.22 151.03 129.58 163.70 112.51 227.74 296.78 381.64 676.77 470.52 497.01 94.84 27.27 93.74 103.37 59.96 2082.20 1845.41 1356.70 90 E28a_E29a KnownJunction 0 251.53 84.26 327.58 157.62 248.47 127.37 204.21 185.98 131.94 250.57 240.59 422.84 833.71 558.78 548.98 134.84 42.08 112.92 135.72 68.39 1915.90 1832.84 1786.31 91 ER29a ExonRegion 0 307.48 55.04 269.44 119.61 239.42 155.25 157.17 175.27 89.43 226.94 138.40 247.72 354.61 277.30 253.88 69.80 13.23 46.17 88.57 46.23 949.51 1496.07 971.98