Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 C1orf26 Gene 0 38.93 45.64 16.13 38.55 37.23 44.99 25.98 29.58 34.32 29.24 7.08 29.89 26.47 9.12 12.58 9.91 10.51 10.56 16.79 34.37 7.68 20.87 14.67 2 367501 Transcript 0 6.59 4.79 0.00 1.32 0.00 0.00 0.00 0.01 1.87 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.59 2.73 1.87 0.00 0.00 0.94 3 367500 Transcript 0 26.46 51.02 7.45 27.38 23.55 39.93 21.13 16.61 20.42 14.97 2.95 5.96 4.59 4.63 8.17 7.20 3.90 8.74 11.67 21.62 4.44 8.09 12.14 4 450350 Transcript 0 0.00 2.92 1.20 0.00 0.03 0.65 0.70 0.00 0.66 0.31 0.00 4.03 3.68 0.00 0.52 0.53 0.00 0.00 0.00 0.01 1.96 0.75 4.14 5 ER1a ExonRegion 0 0.66 0.84 0.00 0.78 0.00 0.00 0.00 0.02 0.66 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.18 1.31 0.48 0.00 0.00 1.87 6 E1a_E3a KnownJunction 0 12.52 8.75 0.00 1.86 0.00 0.00 0.00 0.00 3.07 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.14 3.26 0.00 0.00 0.00 7 ER1b ExonRegion 0 12.28 10.17 0.00 1.91 1.07 5.87 0.53 3.11 2.47 0.92 0.00 0.00 0.00 0.00 0.00 0.00 2.64 0.00 3.19 2.55 0.00 0.00 0.59 8 ER1c ExonRegion 0 3.29 14.79 0.84 3.79 1.53 10.75 4.56 2.87 2.19 2.14 0.48 0.00 0.00 3.41 1.39 12.13 2.24 2.17 8.66 4.40 1.13 3.58 11.28 9 E1b_E3a KnownJunction 0 6.96 68.61 1.57 12.82 11.12 60.65 23.01 6.04 13.19 1.67 2.37 0.00 0.00 0.00 0.00 0.00 0.00 4.19 0.00 15.53 5.37 0.00 8.45 10 ER2a ExonRegion 0 0.00 2.61 0.84 0.00 0.06 1.30 1.40 0.00 1.31 0.62 0.00 1.76 0.55 0.00 1.04 1.07 0.00 0.00 0.00 0.01 1.02 1.49 8.28 11 E2a_E3a KnownJunction 0 0.00 3.22 1.57 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.30 6.82 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.90 0.00 0.00 12 E3_Aa NovelBoundary 0 0.00 0.00 3.99 1.30 0.00 0.00 3.71 1.60 6.42 0.00 0.00 0.00 15.10 5.47 0.00 3.59 0.00 1.74 0.00 0.00 0.00 0.00 0.00 13 ER3a ExonRegion 0 13.11 28.27 3.41 17.38 30.04 55.41 15.92 15.33 25.37 15.90 2.81 11.36 19.11 7.75 1.40 27.00 11.89 6.14 20.00 26.49 5.81 12.03 28.61 14 E3a_E4a KnownJunction 0 2.89 3.35 3.16 18.65 23.94 20.10 6.27 15.28 36.11 18.10 4.90 6.30 18.51 20.43 15.08 123.90 17.67 6.72 78.12 28.25 5.56 23.33 111.83 15 ER4a ExonRegion 0 11.71 9.67 6.69 22.75 15.63 28.80 6.13 12.97 26.97 21.14 7.80 16.57 13.03 9.89 7.16 24.84 8.88 2.74 20.49 39.35 1.93 19.68 41.37 16 E4a_E5a KnownJunction 0 20.45 14.67 8.81 20.38 31.66 18.51 20.36 14.17 26.50 24.79 5.05 41.71 14.77 7.48 4.45 8.12 0.00 0.00 23.81 52.99 0.00 27.62 34.74 17 ER5a ExonRegion 0 10.44 10.55 5.03 14.09 28.30 30.30 19.39 12.98 20.03 14.64 2.10 17.46 30.76 5.67 5.11 8.16 1.57 6.48 11.28 18.93 1.34 25.74 14.73 18 E5a_E6a KnownJunction 0 13.71 15.92 1.33 14.92 30.14 13.51 9.80 8.63 9.72 10.45 0.00 24.91 26.62 3.00 4.45 0.00 4.77 10.49 8.19 14.83 5.93 19.41 7.51 19 I5 Intron 0 6.91 12.93 4.86 9.68 11.09 15.44 12.62 15.76 12.92 8.04 2.32 11.03 8.30 3.40 3.78 2.94 3.12 6.35 10.26 10.10 5.20 8.55 6.56 20 I5_AR1 ActiveIntronRegion 0 9.94 17.58 6.55 13.07 15.70 23.24 17.45 22.62 18.02 11.00 3.43 14.79 12.18 5.19 5.62 4.38 4.65 8.93 15.38 13.41 7.90 12.71 9.64 21 I5 Intron 0 10.52 13.23 4.59 10.84 6.90 6.64 5.44 6.80 6.33 3.99 0.24 2.02 2.18 1.43 2.96 0.91 1.01 1.19 4.89 6.14 0.41 5.24 2.16 22 I5_AR1 ActiveIntronRegion 0 12.30 18.91 5.84 15.64 9.33 12.52 6.73 11.98 11.50 8.19 0.56 4.26 3.37 3.19 4.46 0.86 2.40 1.20 8.33 7.42 0.64 10.29 3.41 23 E6_Aa NovelBoundary 0 7.56 8.16 7.07 24.11 11.97 12.78 4.50 6.41 9.03 1.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17.58 0.00 5.63 3.93 24 ER6a ExonRegion 0 28.41 37.96 10.71 27.85 25.83 30.23 23.17 23.45 27.27 24.44 9.23 39.44 37.21 10.72 8.31 7.35 9.40 8.81 10.74 31.47 6.18 22.78 13.78 25 E6_Da KnownBoundary 0 70.23 41.57 16.44 28.33 39.22 15.79 31.93 21.73 29.17 34.06 13.00 61.22 60.39 14.66 13.85 7.86 29.83 8.46 13.65 33.94 17.67 25.47 6.74 26 ER6b ExonRegion 0 24.42 39.50 13.98 32.26 35.59 34.53 27.43 31.31 30.23 29.14 7.95 57.21 48.91 8.35 6.53 11.31 13.68 8.75 18.22 38.07 7.73 21.44 15.91 27 E6b_E7a KnownJunction 0 9.78 26.44 15.17 12.65 28.78 22.83 7.86 19.80 19.39 23.85 12.42 12.60 26.62 7.53 19.66 3.85 19.17 10.94 8.56 72.42 22.80 13.90 11.18 28 ER7a ExonRegion 0 8.01 27.86 9.23 12.77 22.92 33.74 9.62 17.72 19.84 13.67 5.77 25.54 27.51 7.82 7.54 1.44 14.96 11.83 9.82 41.99 16.23 15.77 6.95 29 E7a_E8a KnownJunction 0 14.30 22.50 7.54 13.85 27.93 36.29 16.16 15.69 20.54 14.18 2.42 28.81 39.61 4.89 4.45 3.59 12.34 6.76 15.91 29.21 14.58 8.08 12.89 30 ER8a ExonRegion 0 7.92 24.00 8.53 17.45 16.01 28.08 12.05 22.53 21.31 23.46 9.09 22.85 25.88 7.73 4.84 13.27 11.11 19.09 17.83 31.29 14.93 17.67 14.79 31 E8a_E9a KnownJunction 0 17.41 18.02 7.95 14.35 19.86 31.57 4.24 20.82 26.97 16.44 11.37 44.86 18.83 7.48 10.51 15.81 0.00 14.67 8.94 37.58 8.65 8.08 15.96 32 E9_Aa NovelBoundary 0 0.00 6.51 0.00 3.40 21.14 2.44 4.50 0.00 10.45 6.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.80 9.14 0.00 0.00 0.00 33 ER9a ExonRegion 0 20.98 34.45 8.88 20.68 35.41 46.60 22.74 25.77 30.94 21.34 8.91 29.63 29.98 7.87 9.16 9.12 7.77 9.78 12.02 27.74 10.07 23.92 11.23 34 E9a_E10a KnownJunction 0 22.89 31.31 10.56 14.85 40.58 64.17 16.03 21.97 29.08 21.46 2.58 36.16 26.95 14.42 8.90 16.41 4.30 12.85 14.02 11.19 7.60 34.72 20.49 35 ER10a ExonRegion 0 22.24 32.95 13.42 24.42 25.50 44.15 25.25 23.37 38.84 23.48 9.70 46.46 32.61 12.06 5.96 12.50 13.22 8.81 15.03 32.67 13.50 21.03 18.24 36 E10a_E11a KnownJunction 0 27.04 29.86 12.89 35.06 35.74 45.03 35.77 17.91 41.09 32.02 7.58 56.57 32.47 7.42 10.75 10.25 4.58 0.00 9.32 36.43 17.05 16.10 35.60 37 ER11a ExonRegion 0 18.60 45.04 21.33 34.25 33.53 48.42 30.51 27.67 29.63 25.22 7.94 42.33 24.50 13.13 9.91 6.70 13.62 10.06 17.82 33.25 13.06 28.86 20.96 38 E11_Da NovelBoundary 0 3.63 11.91 1.83 4.93 7.39 10.45 18.55 2.34 4.43 3.71 0.00 7.65 6.82 0.00 0.00 4.36 0.00 0.00 0.00 8.69 3.15 0.00 0.00 39 E11a_E12a KnownJunction 0 3.78 40.65 20.84 25.34 30.90 36.17 32.02 28.51 12.24 34.01 2.37 34.51 21.59 9.77 4.94 0.00 18.23 6.88 17.32 18.92 16.87 30.98 0.00 40 ER12a ExonRegion 0 19.50 27.63 22.20 36.64 25.64 64.91 20.80 23.62 27.38 26.12 6.33 31.34 29.26 8.00 5.76 4.44 13.00 7.78 17.69 28.04 10.32 25.20 8.81 41 E12a_E13a KnownJunction 0 13.11 15.13 22.41 23.37 23.68 81.83 21.68 34.13 37.18 30.65 9.16 38.86 28.41 0.00 10.01 3.76 13.65 13.35 17.79 19.43 11.37 26.33 12.80 42 ER13a ExonRegion 0 26.84 27.65 21.50 27.10 24.31 54.28 27.88 31.34 36.70 26.01 8.70 30.07 32.17 8.40 11.83 7.52 11.92 10.40 14.61 28.50 7.48 31.23 9.28 43 E13a_E14a KnownJunction 0 62.31 60.52 16.71 26.94 48.05 84.04 20.76 31.18 50.61 40.59 5.11 24.31 25.00 4.24 6.30 7.95 21.32 10.57 3.95 31.70 11.55 40.41 27.57 44 ER14a ExonRegion 0 23.95 39.06 12.20 22.50 43.74 74.67 31.60 31.44 41.59 28.19 6.42 37.59 39.14 12.08 15.38 10.16 10.71 7.05 8.36 30.31 5.06 24.39 8.05 45 E14a_E15a KnownJunction 0 27.34 28.48 20.25 21.98 36.59 67.35 28.13 22.51 52.23 32.85 14.37 53.57 31.49 7.36 10.75 7.52 8.60 2.03 8.85 41.42 8.34 24.80 8.19 46 ER15a ExonRegion 0 33.44 27.51 18.67 41.70 37.96 50.88 23.72 38.88 48.74 39.42 7.33 35.59 49.42 14.08 9.11 9.69 13.96 7.79 15.48 46.29 12.28 26.97 13.91 47 E15a_E16a KnownJunction 0 47.71 42.95 25.58 37.22 65.11 63.15 39.26 30.23 52.23 45.99 4.58 44.56 61.36 7.71 23.49 13.93 9.35 1.78 12.14 26.97 17.67 14.02 11.95 48 ER16a ExonRegion 0 53.12 91.49 22.90 45.92 60.03 56.06 36.08 36.52 44.26 45.90 7.72 40.02 47.87 10.41 10.86 6.77 12.94 6.76 14.86 42.55 9.46 25.10 15.60 49 E16_Da NovelBoundary 0 0.00 18.62 0.00 1.60 0.00 0.00 1.99 6.61 1.79 1.67 0.00 6.30 13.31 0.00 0.00 0.00 0.00 0.00 0.00 9.27 0.00 0.00 0.00 50 E16a_E17a KnownJunction 0 56.45 85.64 20.67 29.23 61.29 47.87 28.71 28.75 28.10 33.90 5.05 61.82 20.13 0.00 24.23 7.78 13.74 3.81 20.80 20.39 3.15 14.45 11.10 51 ER17a ExonRegion 0 40.86 64.21 19.79 45.32 40.58 58.90 34.02 32.42 34.65 33.47 4.39 39.46 28.00 4.49 15.25 8.49 9.83 8.01 10.93 33.43 5.16 17.52 9.17 52 E17a_E18a KnownJunction 0 52.90 62.69 18.63 39.82 61.97 42.13 26.85 29.08 36.78 34.20 0.00 18.01 26.13 2.83 8.90 7.95 8.42 2.36 13.08 31.32 3.15 19.84 7.77 53 ER18a ExonRegion 0 55.31 64.41 15.02 41.48 45.09 40.84 26.28 37.59 31.84 37.76 5.83 19.90 13.23 6.81 24.77 7.67 4.34 4.08 15.45 13.69 4.21 14.24 12.32 54 E18a_E19a KnownJunction 0 106.91 133.79 15.70 51.51 43.12 38.78 36.43 50.19 28.59 32.61 7.69 25.36 15.10 6.71 15.82 4.10 0.00 5.06 9.13 6.52 8.83 17.51 16.05 55 E19_Aa NovelBoundary 0 0.00 0.00 2.48 21.58 0.00 0.00 1.99 9.00 6.31 8.17 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.80 3.26 0.00 0.00 0.00 56 ER19a ExonRegion 0 69.52 106.18 20.62 39.73 37.58 46.35 20.67 31.17 29.19 21.93 9.22 30.37 13.42 4.90 14.37 10.56 4.98 5.06 13.92 20.33 8.20 20.96 12.83 57 E19a_E20a KnownJunction 0 60.01 113.99 27.59 45.82 32.09 54.12 12.67 21.03 28.50 14.61 0.00 18.76 6.33 6.83 4.45 3.67 0.00 7.25 25.04 29.34 9.33 16.90 8.71 58 I19_AR3 ActiveIntronRegion 0 8.08 19.78 0.00 11.15 7.78 9.17 6.62 9.74 9.43 4.59 0.00 0.00 2.56 0.00 0.00 0.00 3.30 0.00 3.19 6.58 1.00 3.79 0.00 59 I19_AR4 ActiveIntronRegion 0 11.64 5.66 6.45 13.84 13.80 11.47 10.06 13.20 11.86 10.88 2.11 4.08 2.50 1.52 3.08 3.69 4.06 10.95 5.62 19.27 3.29 2.26 5.26 60 I19_SR3 SilentIntronRegion 0 12.98 11.36 5.77 16.80 23.15 13.45 15.80 11.58 11.32 7.98 2.47 4.63 5.19 2.55 5.77 3.76 3.99 8.68 9.76 20.25 3.05 5.82 3.81 61 E20_Aa NovelBoundary 0 35.49 15.72 11.44 6.73 46.01 43.27 29.15 19.14 27.60 15.55 0.00 0.00 13.47 7.12 4.45 0.00 0.00 0.00 7.72 17.96 0.00 2.33 0.00 62 ER20a ExonRegion 0 102.55 69.54 35.50 81.13 62.18 80.39 39.26 48.88 58.40 45.45 13.84 30.18 17.76 13.72 29.65 14.38 16.84 15.87 23.72 55.52 10.55 30.13 15.52 63 E20_Da KnownBoundary 0 112.69 66.44 24.93 65.13 71.82 59.97 29.50 40.54 63.54 66.05 9.69 29.11 6.82 7.30 42.28 12.48 21.32 28.23 25.98 48.90 13.22 25.84 4.35 64 ER20b ExonRegion 0 69.14 69.66 19.94 65.55 57.98 48.39 35.81 40.92 45.89 41.11 5.99 17.88 13.78 10.47 23.13 9.47 9.45 19.87 26.35 44.93 6.82 20.68 16.70 65 IG15 Intergenic 0 18.25 36.75 8.16 17.51 25.57 10.10 15.13 15.25 14.53 14.03 1.61 6.45 6.19 4.88 4.70 4.01 5.83 14.13 9.60 21.66 0.00 1.51 3.97 66 IG15_AR1 ActiveIntergenicRegion 0 19.35 40.22 8.79 19.21 26.19 12.35 16.99 18.18 18.60 13.48 2.48 6.98 5.71 5.85 4.35 5.72 8.47 19.91 11.24 26.28 0.00 1.34 4.70 67 IG15_AR2 ActiveIntergenicRegion 0 22.07 40.13 9.23 18.46 32.88 8.27 16.31 13.24 9.69 19.74 0.00 7.84 10.12 4.20 6.88 1.25 1.39 4.86 9.24 18.01 0.00 2.27 3.71