Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PRRX1 Gene 0 113.66 5.19 24.96 14.96 69.90 26.48 34.51 49.33 13.18 21.72 6.63 3.55 434.12 5.84 6.03 0.08 602.57 0.03 0.00 0.24 587.50 1873.82 1052.76 2 239461 Transcript 0 111.63 4.51 22.85 12.69 65.36 24.65 32.42 43.80 10.87 18.37 5.79 3.79 352.74 5.34 4.57 0.00 562.86 0.00 0.00 0.15 463.89 1696.52 1052.25 3 367760 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 497230 Transcript 0 3.05 0.00 2.92 2.01 4.91 0.00 1.94 0.35 2.03 3.56 2.25 0.00 74.94 4.86 1.50 0.00 207.15 0.00 0.00 0.78 194.75 164.12 175.29 5 476867 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 1.23 0.00 0.00 0.00 0.00 0.00 13.75 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.52 0.00 6 495280 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 485529 Transcript 0 0.73 0.03 0.03 0.06 3.49 0.51 0.81 0.34 0.14 0.29 0.05 0.00 24.36 0.18 0.16 1.57 60.79 0.00 0.00 0.00 63.72 54.00 94.09 8 496573 Transcript 0 0.92 0.00 0.00 0.00 1.55 1.86 0.00 0.75 0.27 0.00 0.28 0.00 11.39 0.17 0.00 0.00 28.75 0.00 0.00 0.00 32.69 40.18 53.23 9 IG10_AR2 ActiveIntergenicRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16.30 0.23 0.00 0.00 5.66 0.00 0.00 0.00 0.00 0.00 1.82 10 IG10_AR6 ActiveIntergenicRegion 0 0.00 0.00 2.56 0.00 0.75 0.51 1.11 0.73 0.61 0.00 0.00 1.00 12.55 1.07 0.00 0.00 30.72 0.00 0.00 0.00 17.91 21.64 26.54 11 IG10_SR4 SilentIntergenicRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.05 1.68 0.99 0.00 0.00 0.00 3.05 0.00 0.00 0.00 65.63 0.00 0.00 0.00 4.75 16.48 11.52 12 IG10_AR7 ActiveIntergenicRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 1.32 0.00 0.00 0.00 0.00 0.00 12.37 0.00 0.00 0.00 13.20 0.00 0.00 0.00 11.02 0.00 11.75 13 ER1a ExonRegion 0 31.96 0.72 4.38 0.74 15.83 11.44 10.46 17.33 4.64 6.83 5.00 3.12 179.11 5.69 0.49 0.00 597.04 0.00 0.00 0.00 510.50 1133.42 1153.61 14 E1_Ab KnownBoundary 0 6.15 0.00 8.54 1.40 4.07 10.39 12.19 36.02 1.45 15.31 6.90 0.00 146.74 12.18 0.00 0.00 524.08 0.00 0.00 0.00 444.30 1557.29 1774.36 15 ER1b ExonRegion 0 7.86 0.49 1.28 1.23 5.46 7.07 4.07 8.67 1.66 5.77 4.90 1.81 78.34 2.51 1.65 0.00 322.42 0.00 0.00 0.00 441.80 510.07 789.85 16 E1_Ac KnownBoundary 0 20.74 5.00 2.42 1.56 11.12 14.82 4.99 12.57 5.27 4.14 7.37 0.00 73.05 4.94 4.45 0.00 559.70 0.00 0.00 0.00 815.46 582.76 826.91 17 ER1c ExonRegion 0 14.27 1.87 2.13 4.37 10.72 7.97 5.45 19.36 6.67 10.09 4.78 0.00 127.64 5.26 3.11 0.00 581.96 0.00 0.00 0.00 984.55 886.41 1164.60 18 E1a_E2a KnownJunction 0 9.93 6.31 5.47 2.06 12.56 18.85 16.61 20.41 8.97 17.30 2.37 0.00 149.18 2.30 0.00 0.00 787.66 0.00 0.00 0.00 1185.01 793.77 1012.83 19 I1_AR1 ActiveIntronRegion 0 37.26 0.91 5.27 2.52 5.88 0.87 4.34 6.75 1.64 3.94 0.14 0.33 37.94 0.19 1.97 0.00 55.28 0.00 0.15 0.00 49.70 36.53 113.86 20 I1_SR2 SilentIntronRegion 0 64.25 3.14 3.24 2.67 6.91 1.34 8.72 2.59 0.28 2.44 0.00 0.00 127.02 0.30 6.29 0.00 65.33 0.00 0.00 0.00 35.72 57.86 287.61 21 I1_AR2 ActiveIntronRegion 0 63.43 1.78 6.43 3.92 10.62 4.58 3.93 4.97 1.24 4.12 0.00 0.00 76.36 1.62 2.54 0.00 63.65 0.00 0.00 0.00 42.49 40.76 145.46 22 I1_AR3 ActiveIntronRegion 0 73.70 2.70 9.04 2.44 17.07 1.02 7.14 7.35 1.66 6.63 0.00 1.02 102.39 0.22 3.83 0.00 62.00 0.00 0.00 0.00 51.45 47.33 182.69 23 I1_AR8 ActiveIntronRegion 0 27.81 0.76 4.41 1.79 6.37 0.50 3.49 5.32 0.66 1.16 0.24 0.00 19.91 0.00 0.01 0.00 25.89 0.00 0.00 0.00 18.24 18.23 39.80 24 ER2a ExonRegion 0 22.37 2.87 15.45 9.01 10.34 9.71 12.07 27.93 16.79 15.73 8.32 1.03 279.06 8.38 5.21 0.35 1020.50 0.00 0.00 0.00 1629.49 1678.37 1468.52 25 E2a_E4a KnownJunction 0 27.86 9.14 24.42 13.32 35.48 23.68 15.19 42.31 19.13 23.85 9.37 0.00 344.46 11.42 8.90 4.36 1386.25 0.00 0.00 0.00 2241.72 1674.37 1605.59 26 ER3a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 1.23 0.00 0.00 0.00 0.00 0.00 13.75 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.52 0.00 27 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28 ER3b ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 1.32 0.00 0.00 0.00 0.00 0.00 8.36 0.00 0.00 0.00 0.29 0.00 0.00 0.00 0.10 4.17 0.13 29 ER4a ExonRegion 0 28.04 3.71 16.83 12.12 29.48 21.82 17.92 40.42 18.83 22.00 10.50 1.00 508.25 15.65 9.34 0.56 1327.11 0.00 0.00 0.60 1991.81 2315.59 1954.90 30 E4_Da KnownBoundary 0 7.56 0.00 1.83 3.66 7.47 0.00 0.00 3.70 0.00 3.89 7.74 0.00 121.26 7.30 0.00 0.00 459.56 0.00 0.00 0.00 412.18 217.44 251.91 31 E4a_E5b KnownJunction 0 37.34 3.16 0.00 1.86 18.93 13.51 14.66 32.04 11.57 3.65 4.21 0.00 350.63 2.47 4.45 0.00 661.24 0.00 0.00 0.00 1122.68 1075.69 1186.46 32 E4a_E7a KnownJunction 0 13.71 0.00 6.56 9.62 3.57 8.01 5.39 21.52 13.05 17.46 2.26 0.00 136.84 4.94 0.00 0.00 366.06 0.00 0.00 0.00 704.69 1017.82 719.44 33 ER4b ExonRegion 0 3.05 0.00 2.92 2.01 4.91 0.00 1.94 0.35 2.03 3.56 2.25 0.00 74.94 4.86 1.50 0.00 207.15 0.00 0.00 0.78 194.75 164.12 175.29 34 E4_Db NovelBoundary 0 6.67 0.00 2.99 1.27 4.07 2.67 4.28 4.11 0.00 5.29 5.00 6.00 87.33 7.24 6.18 0.00 199.25 0.00 0.00 0.00 211.71 124.86 173.46 35 I4 Intron 0 9.60 0.88 3.13 2.19 8.34 2.83 4.47 4.81 2.39 3.01 1.82 2.15 111.25 1.45 1.18 0.18 92.02 0.00 0.00 0.07 61.41 165.84 103.52 36 I4_AR1 ActiveIntronRegion 0 13.70 1.16 4.62 3.05 11.83 3.80 6.03 6.57 3.04 4.04 2.25 2.93 145.75 1.72 1.75 0.07 109.17 0.00 0.00 0.10 62.64 210.29 111.57 37 ER5a ExonRegion 0 0.73 0.03 0.03 0.06 3.49 0.51 0.81 0.34 0.14 0.29 0.05 0.00 24.36 0.18 0.16 1.57 60.79 0.00 0.00 0.00 63.72 54.00 94.09 38 E5_Ab KnownBoundary 0 3.19 0.00 0.00 0.00 3.74 2.61 3.97 0.00 0.00 1.16 0.00 0.00 18.18 0.00 0.00 3.85 74.52 0.00 0.00 0.00 71.04 51.19 126.51 39 ER5b ExonRegion 0 36.88 1.23 5.64 3.72 10.18 10.43 16.75 31.84 8.77 12.28 9.80 5.24 390.92 11.23 4.66 0.54 844.80 0.00 0.00 0.00 1286.31 1674.62 1458.06 40 E5a_E7a KnownJunction 0 92.76 5.79 8.72 4.00 18.93 12.72 20.93 38.49 9.92 11.55 15.06 12.45 466.37 5.24 8.90 0.00 937.82 0.00 0.00 0.00 1296.03 2322.40 1419.84 41 ER6a ExonRegion 0 1.84 0.00 0.00 0.00 3.10 3.72 0.00 1.49 0.53 0.00 0.56 0.00 22.78 0.33 0.00 0.00 57.50 0.00 0.00 0.00 65.37 80.37 106.47 42 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 43 ER7a ExonRegion 0 62.84 5.72 18.59 13.42 54.59 42.94 30.67 65.90 21.21 31.72 15.08 3.12 753.41 12.55 9.66 0.75 1192.56 0.75 0.00 0.00 1551.41 2879.04 1912.81 44 E7_Da KnownBoundary 0 48.38 9.54 24.95 11.65 104.84 62.29 48.80 84.53 32.06 32.45 21.64 0.00 1156.26 11.65 6.30 0.00 1314.63 0.00 0.00 0.00 1103.28 4821.04 1867.57 45 ER7b ExonRegion 0 63.89 4.26 12.15 8.57 59.83 30.72 34.04 79.37 24.61 36.55 13.82 8.23 1306.01 13.36 6.08 0.00 1447.39 0.00 0.00 0.79 995.04 4374.87 2182.23 46 E7_Db KnownBoundary 0 111.28 0.00 6.83 3.60 72.07 52.64 52.73 48.26 15.91 15.28 11.58 6.30 1920.17 12.54 0.00 0.00 995.79 0.00 0.00 0.00 873.10 2879.57 1364.53 47 ER7c ExonRegion 0 191.30 8.30 41.32 24.64 114.89 37.87 54.39 70.27 17.09 29.90 6.59 4.46 526.38 4.99 8.65 0.00 528.68 0.00 0.00 0.30 417.28 2259.62 950.88