Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 METTL13 Gene 0 56.57 74.27 86.61 72.48 52.87 66.88 43.80 44.20 34.61 94.15 157.65 52.70 36.32 172.49 140.63 133.16 100.53 98.75 73.43 105.27 83.03 58.92 52.18 2 367738 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 458517 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 485629 Transcript 0 0.00 2.03 1.23 1.36 0.00 0.00 0.00 0.00 0.00 0.00 2.90 0.00 2.35 0.00 0.00 1.49 1.65 0.00 0.00 0.00 1.10 0.00 0.00 5 362019 Transcript 0 0.00 0.00 6.00 8.62 0.00 2.21 0.00 1.60 2.92 4.75 2.53 6.30 0.00 0.00 4.45 0.00 0.00 9.53 0.00 2.43 5.87 0.00 7.85 6 367737 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 361735 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 367736 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 341850 Transcript 0 2.74 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 478330 Transcript 0 4.69 6.11 6.36 2.37 9.14 6.08 7.57 4.45 4.20 6.88 13.00 9.71 5.19 9.38 9.72 8.29 12.00 6.53 7.63 16.82 0.73 10.02 3.31 11 466643 Transcript 0 6.96 0.00 28.62 20.44 35.14 36.17 12.41 13.35 8.28 29.20 40.69 6.30 0.00 14.60 20.40 16.75 8.88 13.47 9.04 6.33 13.34 0.00 7.34 12 476386 Transcript 0 14.51 10.69 17.54 12.33 10.12 12.84 6.77 7.02 6.31 16.95 24.21 5.62 3.65 29.51 31.88 23.20 18.57 16.43 10.98 22.82 16.62 10.20 6.86 13 ER1a ExonRegion 0 0.25 0.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.74 1.82 0.00 0.00 6.50 0.51 3.32 0.19 0.00 0.00 0.00 3.37 0.00 0.00 14 E1_Ac KnownBoundary 0 6.82 3.35 0.00 0.00 0.00 0.00 1.99 0.00 0.00 0.00 10.74 0.00 0.00 14.36 0.00 16.58 3.65 0.00 0.00 0.00 6.18 0.00 0.00 15 E1_Ad KnownBoundary 0 3.78 6.71 0.00 0.00 0.00 11.58 2.25 0.00 0.00 1.67 13.42 0.00 0.00 0.00 6.30 13.07 18.79 3.98 0.00 3.26 15.75 12.49 8.71 16 ER1b ExonRegion 1 14.70 12.31 1.23 2.27 3.42 13.04 3.16 0.19 1.10 5.73 43.06 0.00 5.21 24.45 32.40 25.59 28.06 7.80 5.31 7.45 26.08 12.85 21.70 17 E1_Ae KnownBoundary 1 60.75 51.64 7.57 10.55 50.93 74.56 40.67 8.54 9.46 17.73 97.02 0.00 27.43 150.45 45.00 121.34 115.94 57.08 34.64 27.04 41.39 47.27 72.56 18 ER1c ExonRegion 1 43.54 41.98 5.95 7.50 25.99 60.91 26.10 4.94 4.23 13.19 115.15 0.00 33.50 133.53 78.75 92.35 101.86 39.20 25.94 25.99 58.40 43.01 67.75 19 ER1d ExonRegion 1 82.90 59.65 10.42 16.35 49.06 97.80 61.78 11.52 7.82 20.26 180.40 0.00 52.37 224.94 112.18 155.05 146.89 56.97 41.41 39.72 74.93 69.10 96.42 20 ER1e ExonRegion 1 105.78 158.01 52.84 71.62 98.71 188.27 118.87 33.83 35.13 93.06 259.90 27.98 45.08 210.70 104.13 312.78 162.70 190.89 145.81 158.43 121.04 73.71 146.71 21 E1_Da KnownBoundary 0 16.60 34.73 50.71 28.04 33.02 70.36 28.71 18.24 28.50 91.41 33.90 29.56 20.13 23.49 8.90 64.26 29.45 122.62 21.27 26.27 49.36 23.51 13.91 22 E1a_E1f KnownJunction 0 7.04 0.00 1.15 1.30 0.00 0.00 0.00 0.00 0.00 2.69 8.74 0.00 0.00 9.01 0.00 8.12 0.00 3.52 0.00 0.00 0.00 0.00 0.00 23 E1a_E2a KnownJunction 0 0.00 0.00 6.00 8.62 0.00 2.21 0.00 1.60 2.92 4.75 2.53 6.30 0.00 0.00 4.45 0.00 0.00 9.53 0.00 2.43 5.87 0.00 7.85 24 ER1f ExonRegion 0 13.69 27.23 64.44 63.13 27.05 36.68 23.25 33.21 37.70 108.42 192.12 54.04 70.40 189.23 97.62 213.79 117.09 140.24 110.28 119.80 99.24 68.51 96.15 25 E1_Af KnownBoundary 0 10.22 64.79 92.10 70.49 91.94 193.81 90.40 26.53 42.94 96.86 178.26 91.68 135.87 198.72 106.81 108.52 105.47 143.01 95.34 132.82 68.51 100.48 40.12 26 ER1g ExonRegion 0 41.40 135.43 79.18 77.12 63.77 169.93 110.79 38.80 46.37 114.42 237.28 101.87 82.72 242.81 138.73 186.21 149.24 141.32 82.92 110.33 119.72 72.56 69.63 27 E1b_E2a KnownJunction 0 75.79 108.34 66.85 81.21 74.96 64.57 21.60 43.78 33.68 118.14 240.53 91.68 102.75 175.06 76.02 186.36 151.19 142.81 99.86 174.62 121.15 90.81 41.83 28 ER2a ExonRegion 0 64.08 86.77 94.51 94.71 47.67 48.72 39.47 40.86 55.45 119.08 281.76 107.57 59.23 272.20 158.70 201.74 201.66 141.34 131.59 163.83 127.11 102.82 71.15 29 E2_Ab KnownBoundary 0 25.78 59.27 73.95 67.86 29.03 26.18 34.89 25.42 35.01 84.96 170.73 44.26 39.28 158.04 81.22 128.94 96.03 84.81 82.36 110.19 39.78 62.89 72.39 30 E2_Ac KnownBoundary 0 48.23 38.09 34.24 59.27 19.78 47.59 21.29 35.08 32.70 54.23 144.62 18.91 19.64 127.08 112.12 173.54 148.39 75.20 99.49 115.88 64.25 56.21 51.90 31 ER2b ExonRegion 0 52.44 62.36 87.14 110.39 58.27 50.53 43.10 47.05 59.15 117.24 272.75 116.90 59.93 321.21 199.22 267.82 231.80 141.04 135.20 181.09 98.92 99.55 94.95 32 ER2c ExonRegion 0 45.13 65.43 73.25 75.40 44.25 64.92 43.46 47.62 46.64 111.00 231.32 111.76 39.36 252.84 159.15 194.11 155.02 136.84 112.95 155.51 130.45 75.35 70.93 33 E2_Da KnownBoundary 1 51.12 59.07 77.61 48.51 38.96 31.35 37.41 51.14 42.39 110.67 227.48 61.22 0.00 228.15 174.18 130.48 158.86 132.86 167.53 145.41 125.22 67.79 41.66 34 E2a_E3b KnownJunction 0 0.00 0.00 3.19 1.70 0.00 2.84 0.00 0.00 1.74 2.44 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 35 ER2d ExonRegion 1 24.95 39.85 68.22 39.98 25.29 40.44 27.33 38.54 29.34 94.21 165.75 26.70 8.79 208.30 125.54 144.31 124.43 102.15 60.44 119.44 95.32 47.92 44.81 36 E2_Db KnownBoundary 1 16.60 21.58 33.91 28.20 4.07 8.12 22.66 19.72 12.50 44.00 68.28 0.00 12.01 60.98 16.69 55.71 43.20 53.93 24.19 53.56 44.29 19.35 19.80 37 E2b_E6b KnownJunction 0 2.74 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 38 E2_Dc KnownBoundary 1 5.93 27.36 33.06 26.10 3.82 2.73 9.85 17.13 20.78 35.32 68.02 0.00 0.00 33.85 10.51 62.21 17.20 44.56 13.84 50.94 50.04 37.90 7.34 39 E2c_E6c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 40 ER2e ExonRegion 1 29.63 49.82 69.23 47.02 18.73 33.01 34.42 27.66 33.97 88.31 161.40 4.33 9.38 244.43 121.85 159.01 135.34 134.89 47.78 114.89 101.37 61.46 45.52 41 ER2f ExonRegion 1 28.33 56.59 72.90 43.90 21.12 51.31 31.32 31.26 40.21 93.12 187.16 10.13 10.88 265.84 154.20 164.48 145.38 128.71 51.10 138.80 109.62 70.40 59.11 42 E2d_E3a KnownJunction 1 44.16 58.87 95.71 60.07 37.01 88.87 43.46 44.52 48.12 123.86 223.32 20.11 25.97 308.55 158.48 158.16 127.72 193.71 85.84 145.48 107.68 64.05 72.90 43 ER3a ExonRegion 0 32.92 47.00 95.58 38.92 26.46 70.30 34.57 36.11 42.13 108.83 204.67 30.79 23.45 267.62 176.01 147.29 131.30 137.55 65.12 126.24 105.29 59.26 57.10 44 ER3b ExonRegion 1 40.41 50.42 83.84 62.27 24.46 68.80 34.15 49.19 39.12 118.65 188.17 23.42 26.00 226.65 175.61 148.23 126.21 142.53 78.80 116.80 126.47 57.76 57.10 45 E3a_E4a KnownJunction 0 38.82 65.45 114.19 72.85 11.38 78.19 22.57 51.84 40.22 128.40 160.09 31.21 40.74 311.32 197.91 137.31 114.26 196.74 90.26 140.75 82.10 61.66 55.49 46 ER3c ExonRegion 0 0.00 2.03 1.23 1.36 0.00 0.00 0.00 0.00 0.00 0.00 2.90 0.00 2.35 0.00 0.00 1.49 1.65 0.00 0.00 0.00 1.10 0.00 0.00 47 ER4a ExonRegion 1 37.33 74.93 89.86 88.09 42.22 55.90 44.94 54.44 40.23 124.52 209.09 26.83 41.90 269.73 202.71 163.27 136.39 131.82 95.32 149.43 108.88 59.62 64.51 48 E4_Ab KnownBoundary 0 94.39 76.10 79.54 96.32 80.05 78.36 66.24 51.96 43.00 114.43 230.74 40.96 47.56 215.96 173.56 163.97 146.98 114.41 86.50 174.30 134.55 84.56 74.61 49 ER4b ExonRegion 0 90.01 87.07 112.83 93.82 41.40 76.63 69.23 57.27 40.63 145.81 229.71 72.46 45.54 258.32 238.44 160.89 140.55 142.13 101.09 154.14 108.33 90.08 72.57 50 E4_Ac KnownBoundary 0 162.33 127.48 131.31 78.38 54.75 85.97 85.15 52.74 25.20 130.04 255.70 103.53 71.42 287.36 253.29 191.06 154.56 147.95 128.00 180.76 97.61 102.75 79.05 51 ER4c ExonRegion 0 80.90 90.72 140.35 100.51 64.34 99.63 60.72 67.85 46.07 132.32 290.34 63.78 61.95 303.54 267.52 218.38 150.17 216.43 132.12 161.16 120.91 87.07 81.96 52 E4a_E5a KnownJunction 0 70.68 108.40 106.92 102.28 48.30 83.82 63.37 62.19 30.76 106.99 208.47 76.98 53.41 257.93 268.99 186.96 124.82 164.32 89.60 134.61 128.13 81.62 67.86 53 E4a_E6a KnownJunction 0 6.96 0.00 28.62 20.44 35.14 36.17 12.41 13.35 8.28 29.20 40.69 6.30 0.00 14.60 20.40 16.75 8.88 13.47 9.04 6.33 13.34 0.00 7.34 54 E5_Aa NovelBoundary 0 23.49 3.35 14.78 2.83 17.32 11.02 6.27 1.64 1.79 3.92 16.85 0.00 20.45 12.18 12.36 19.05 13.00 15.55 13.55 5.43 5.81 11.08 11.44 55 ER5a ExonRegion 0 60.07 71.85 106.37 96.11 55.20 65.83 47.31 62.08 42.47 97.10 217.66 74.13 37.46 272.04 228.72 189.98 110.07 148.58 105.45 160.35 136.42 79.15 74.06 56 E5_Da KnownBoundary 0 6.67 2.89 14.96 3.53 12.05 8.35 10.20 2.42 8.30 7.63 22.01 6.30 5.84 4.47 32.51 10.94 30.20 12.06 4.71 18.09 0.00 14.39 3.76 57 E5a_E6a KnownJunction 0 73.57 74.39 85.09 107.78 73.09 43.16 50.92 62.15 38.31 90.20 171.78 76.98 22.08 228.97 256.01 136.80 85.83 142.48 32.94 110.38 136.78 55.91 50.79 58 E5a_E7b NovelJunction 0 2.82 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.79 0.00 0.00 0.00 4.45 8.72 0.00 3.81 0.00 0.00 2.53 0.00 0.00 59 ER5b ExonRegion 0 4.69 6.11 6.36 2.37 9.14 6.08 7.57 4.45 4.20 6.88 13.00 9.71 5.19 9.38 9.72 8.29 12.00 6.53 7.63 16.82 0.73 10.02 3.31 60 ER6a ExonRegion 0 65.91 89.04 107.57 99.85 69.25 85.36 66.95 58.23 40.05 114.72 190.34 58.34 22.22 246.29 222.98 140.75 88.81 141.44 93.13 120.41 137.26 93.21 54.82 61 E6_Ab KnownBoundary 1 35.41 61.11 32.11 51.04 21.48 27.37 28.84 24.56 20.92 41.42 75.91 11.70 0.00 62.10 70.46 55.20 43.85 65.16 78.97 54.39 45.16 66.32 32.44 62 E6_Ac KnownBoundary 0 33.93 48.28 64.60 29.17 20.03 38.50 23.45 16.84 15.57 38.73 89.65 35.41 6.66 41.20 44.01 73.31 26.55 40.62 29.93 61.87 49.30 32.03 26.80 63 ER6b ExonRegion 0 65.61 97.61 109.06 93.36 52.18 96.27 71.49 44.94 43.23 113.54 179.76 51.95 39.87 259.05 210.34 170.90 69.32 129.34 130.60 126.60 121.20 111.47 61.67 64 ER6c ExonRegion 0 67.75 103.92 102.36 94.34 57.35 109.20 60.77 50.80 47.84 128.18 208.32 43.79 39.91 264.85 223.84 183.97 120.28 128.83 100.46 153.25 138.68 77.85 61.60 65 E6a_E7b KnownJunction 0 90.76 67.16 104.76 91.90 101.19 104.54 55.34 60.26 54.74 142.61 182.10 51.17 32.14 269.71 273.69 159.10 157.36 136.46 80.28 215.53 110.77 95.83 68.38 66 ER7a ExonRegion 0 38.10 19.66 42.07 36.34 29.43 37.90 19.42 20.17 18.94 50.85 67.01 14.43 10.94 84.45 89.94 64.40 49.51 48.66 31.85 65.25 46.28 29.17 19.58 67 ER7b ExonRegion 0 118.72 129.89 133.05 109.63 114.12 102.64 77.64 64.81 58.60 158.06 282.72 81.27 70.06 306.75 291.61 234.48 180.42 128.89 105.29 177.75 136.29 94.06 106.15 68 E7_Da NovelBoundary 0 12.45 6.71 7.21 29.90 20.29 12.44 14.93 16.35 8.13 11.93 14.79 24.76 33.11 12.24 13.35 3.16 0.00 6.30 11.29 36.82 13.10 17.08 12.29 69 E7a_E8a KnownJunction 0 147.58 151.68 146.27 113.87 127.08 133.73 98.97 72.78 52.69 137.24 273.49 110.29 52.59 351.88 296.93 210.97 182.98 104.59 145.79 173.02 146.04 88.97 85.96 70 E7a_E9a KnownJunction 0 3.48 7.89 2.72 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.53 0.00 0.00 2.41 4.45 3.33 3.74 0.00 0.00 2.62 2.66 0.00 0.00 71 I7 Intron 0 24.56 30.04 20.73 38.14 25.46 24.34 17.02 12.47 6.45 21.68 17.91 10.22 8.82 17.11 16.70 17.61 7.16 9.75 14.62 20.07 9.20 16.52 10.79 72 I7_SR1 SilentIntronRegion 0 3.43 3.29 0.00 0.00 0.00 4.45 5.36 0.00 0.00 0.00 1.56 14.02 2.68 25.96 18.51 9.25 10.48 1.50 10.06 8.54 0.00 10.12 16.27 73 I7_AR2 ActiveIntronRegion 0 27.13 33.30 23.24 42.76 28.54 26.76 18.46 13.98 7.23 24.30 19.90 9.84 9.58 16.15 16.58 18.63 6.80 10.76 15.20 21.50 10.31 17.35 10.17 74 E8_Aa NovelBoundary 0 63.20 51.50 25.37 31.96 20.12 18.91 22.66 13.55 7.03 27.02 27.85 18.46 0.00 15.13 28.06 16.49 9.54 12.77 12.24 23.46 6.05 15.12 13.06 75 ER8a ExonRegion 0 119.39 145.36 177.46 132.15 104.60 120.94 77.35 91.44 59.72 156.43 225.11 83.44 60.11 235.25 270.59 176.16 141.51 140.57 113.45 156.03 116.36 95.50 71.58 76 E8_Da KnownBoundary 0 171.36 137.74 117.50 104.88 101.19 54.40 51.67 78.41 43.66 116.90 120.35 82.83 26.62 113.78 118.30 72.20 59.75 103.14 72.76 113.96 53.19 84.07 41.23 77 ER8b ExonRegion 0 106.52 108.66 97.48 99.44 50.33 60.52 36.11 62.58 29.49 89.30 104.11 47.77 53.45 127.80 121.50 74.05 55.26 84.84 47.84 96.07 55.51 64.23 46.02 78 E8_Db KnownBoundary 0 101.80 105.64 111.53 110.91 61.97 93.36 39.88 53.11 28.04 91.04 90.71 43.36 58.60 85.94 101.12 56.14 58.44 90.45 58.83 89.93 50.47 28.66 48.74 79 ER8c ExonRegion 0 68.92 76.85 91.19 81.63 69.64 51.81 33.73 37.98 23.85 69.12 65.37 56.49 31.22 54.54 71.35 52.45 38.60 37.24 38.68 46.80 22.93 39.83 20.45 80 ER9a ExonRegion 0 1.95 4.50 7.82 0.65 0.92 0.63 0.91 0.88 0.00 0.02 3.09 2.44 0.00 1.67 1.27 1.88 2.46 0.63 1.09 0.59 0.93 1.43 1.01