Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RP11-206L10.7 Gene 0 5.01 3.96 4.51 11.43 8.72 14.37 7.66 9.62 13.36 10.96 10.87 13.20 17.12 15.48 10.53 17.03 16.31 10.15 6.20 10.74 7.64 5.92 7.10 2 457084 Transcript 0 2.15 3.39 5.31 8.96 5.03 4.07 5.04 7.06 8.51 9.81 8.75 13.04 13.09 12.32 6.43 10.83 11.45 6.33 5.59 7.54 3.72 6.08 4.45 3 429505 Transcript 0 6.22 2.20 1.15 5.76 4.41 12.14 4.95 4.74 11.43 6.88 5.34 2.63 7.00 5.83 4.76 9.39 9.91 4.31 2.14 4.83 4.55 0.79 3.10 4 ER1a ExonRegion 0 2.23 2.96 3.08 7.50 4.93 7.48 2.68 7.29 3.12 9.10 8.47 0.46 0.00 12.46 7.31 10.43 15.21 7.77 7.89 5.84 9.39 4.09 8.05 5 E1_Ab KnownBoundary 1 58.23 61.77 105.56 108.41 105.26 159.74 45.53 124.91 73.44 137.86 116.19 32.56 13.15 81.41 44.75 157.39 189.90 272.27 87.44 90.00 37.99 51.74 117.80 6 ER1b ExonRegion 0 3.94 5.37 6.37 13.97 7.88 8.91 0.18 6.39 7.17 15.55 6.66 1.80 0.52 21.25 11.93 20.97 10.09 16.73 11.86 12.23 12.37 1.27 13.38 7 E1_Da NovelBoundary 0 6.89 0.00 3.37 3.90 0.00 4.83 0.00 2.55 1.65 0.00 7.74 0.00 0.00 24.13 5.07 19.48 13.28 25.04 8.00 15.28 17.30 18.61 55.57 8 E1a_E2a KnownJunction 0 0.00 5.06 5.38 3.43 0.00 0.00 0.00 0.00 6.54 7.39 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.74 4.42 2.68 0.00 0.00 0.00 9 E1a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 2.61 0.00 0.00 0.00 0.99 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 I1 Intron 0 2.85 2.87 3.32 9.09 5.49 5.24 6.99 5.81 6.62 4.42 7.08 17.37 20.24 10.53 3.04 6.20 7.99 0.86 1.61 6.44 3.04 7.63 5.63 11 I1_SR1 SilentIntronRegion 0 2.46 1.42 1.27 1.65 1.24 2.34 3.23 1.80 2.35 1.19 4.04 1.66 5.03 11.63 1.67 6.56 8.05 1.27 2.22 2.47 4.86 2.42 6.82 12 I1_AR3 ActiveIntronRegion 0 3.53 4.17 4.35 10.40 7.72 6.59 10.58 7.20 8.59 6.39 11.09 27.34 27.97 9.42 4.40 5.61 10.32 1.11 1.58 8.57 2.68 9.81 6.31 13 I1_SR2 SilentIntronRegion 0 2.40 2.66 3.93 14.13 6.67 6.25 6.18 7.74 8.12 5.01 5.16 19.74 24.77 10.89 2.70 6.57 5.28 0.23 1.10 7.49 1.86 9.74 3.81 14 E2_Aa NovelBoundary 0 3.78 0.00 1.57 21.48 15.28 5.11 31.71 18.24 13.51 11.77 15.16 102.93 40.09 2.88 0.00 12.56 3.83 3.73 9.41 0.00 3.15 11.51 7.34 15 ER2a ExonRegion 0 4.23 2.15 7.46 15.96 10.16 4.72 12.44 13.90 15.88 12.94 17.78 38.68 39.27 24.51 11.97 22.06 19.15 9.49 4.47 14.10 1.77 14.16 5.29 16 E2_Da NovelBoundary 1 7.11 12.37 13.63 66.29 22.41 26.46 44.12 32.98 31.34 22.59 18.06 89.58 79.22 57.33 10.75 36.91 29.64 2.36 9.60 45.51 0.00 35.52 8.71 17 Ix_AR1 ActiveIntronRegion 0 0.00 2.03 0.00 1.25 0.00 7.34 0.55 0.00 1.44 0.00 4.99 0.00 0.00 2.30 0.00 1.98 0.00 0.00 0.00 1.77 0.00 9.38 0.00 18 Ix_SR1 SilentIntronRegion 0 3.50 3.02 2.42 10.92 5.56 6.74 8.26 8.71 5.43 6.24 8.93 20.34 25.45 11.63 3.31 7.99 8.24 2.67 0.63 7.23 3.25 9.57 3.07 19 I2 Intron 0 11.06 5.37 3.17 8.55 7.30 5.80 6.86 5.19 8.42 4.64 3.08 6.74 10.24 6.21 3.51 8.32 11.08 2.98 3.38 7.93 3.56 2.99 4.32 20 I2_SR1 SilentIntronRegion 0 12.01 5.90 3.44 9.35 7.92 6.33 7.48 5.71 9.11 5.08 3.31 7.22 10.37 6.69 3.67 8.95 12.09 3.23 3.72 8.52 3.92 3.18 4.67 21 Ix_AR1 ActiveIntronRegion 0 11.11 2.20 3.60 11.58 11.06 9.68 7.41 7.68 12.29 2.91 4.42 8.02 8.55 10.75 7.48 16.42 11.32 11.53 3.50 11.49 8.76 5.46 8.97 22 Ix_SR2 SilentIntronRegion 0 19.22 0.00 0.76 3.97 8.32 11.08 8.53 1.92 4.11 2.47 2.40 5.37 9.29 3.85 4.35 5.91 5.41 1.20 1.56 2.91 0.00 1.75 3.64 23 Ix_AR3 ActiveIntronRegion 0 1.41 2.03 1.23 4.09 8.03 0.00 0.00 5.19 6.18 3.82 5.80 10.82 4.69 8.93 0.00 16.84 0.00 1.85 4.78 2.13 2.20 0.00 2.94 24 Ix_SR4 SilentIntronRegion 0 10.64 3.57 0.36 8.69 20.39 10.18 9.74 3.50 8.42 3.92 2.98 9.11 13.10 6.76 1.48 10.16 5.11 2.43 4.11 8.27 1.63 4.58 4.01 25 E3_Aa NovelBoundary 0 10.22 18.68 3.28 15.32 7.22 29.24 2.12 6.82 15.31 12.97 7.74 0.00 13.15 4.71 5.81 25.63 29.73 13.60 4.42 31.26 37.00 2.82 11.10 26 ER3a ExonRegion 0 8.11 6.86 4.60 12.39 12.09 28.23 9.46 9.15 19.13 12.64 9.05 8.33 18.48 12.21 13.80 19.29 18.35 14.50 6.95 13.93 11.91 3.15 7.86 27 E3_Da NovelBoundary 0 9.71 6.71 8.63 8.79 4.33 13.06 14.84 9.28 21.56 11.60 5.32 0.00 14.93 3.00 4.45 16.75 12.72 16.25 13.08 6.52 15.20 0.00 13.06 28 E3a_E4a KnownJunction 0 11.19 0.00 0.00 3.83 0.00 0.00 3.97 2.18 6.86 9.59 5.37 0.00 0.00 2.47 0.00 4.19 13.09 0.00 0.00 0.00 3.15 0.00 0.00 29 E4_Aa NovelBoundary 0 20.89 0.00 1.24 16.51 21.39 9.99 15.90 6.98 13.17 9.43 6.74 18.91 14.12 7.24 0.00 11.62 13.46 10.11 7.72 18.54 8.77 5.76 7.60 30 ER4a ExonRegion 0 5.57 1.95 0.00 6.83 5.54 17.71 6.34 7.64 19.74 4.28 6.96 2.21 9.52 8.64 5.22 14.09 8.19 2.75 1.62 5.38 3.13 0.00 4.55