Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RP5-1115A15.1 Gene 0 9.07 1.18 1.46 3.69 7.39 1.87 5.67 6.92 6.42 3.85 1.82 6.07 7.80 2.39 6.29 6.91 3.84 1.93 1.39 4.02 1.92 1.06 3.63 2 449895 Transcript 0 4.87 0.25 0.56 2.69 2.80 0.68 1.88 1.77 2.28 1.38 0.24 2.11 2.73 0.78 2.54 3.31 1.43 0.65 0.58 2.63 0.68 0.13 0.91 3 444276 Transcript 0 3.39 0.72 0.86 0.00 2.65 1.07 3.60 3.08 3.39 3.53 1.75 4.57 6.84 1.67 3.43 3.32 2.35 1.74 0.38 1.96 1.89 0.61 2.42 4 ER1a ExonRegion 0 1.71 0.00 0.00 0.50 0.00 0.00 0.00 0.03 0.00 0.00 0.00 0.30 0.00 0.00 1.63 0.00 0.00 0.10 0.00 1.38 0.00 0.00 0.00 5 E1a_E3a KnownJunction 0 0.00 0.00 0.00 1.73 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.88 0.00 0.00 0.00 6 E2_Aa NovelBoundary 0 52.45 3.35 0.00 3.50 8.06 8.35 13.29 19.18 4.28 11.23 0.00 20.26 26.95 0.00 10.75 8.63 12.72 0.00 9.22 6.14 3.15 3.06 3.93 7 ER2a ExonRegion 0 2.75 0.00 0.80 0.00 3.50 3.20 4.05 5.61 4.81 5.96 0.00 4.66 1.68 1.17 8.03 3.89 4.18 2.40 0.00 2.78 2.88 0.91 6.33 8 E2_Da NovelBoundary 0 3.78 9.34 1.24 5.83 0.00 2.33 0.00 14.42 16.15 10.21 0.00 5.55 0.00 2.47 15.20 12.30 8.70 3.77 4.14 5.62 2.84 0.00 7.51 9 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 Ix Intron 0 13.20 3.23 3.01 3.05 6.18 2.12 6.27 11.08 8.66 7.11 0.56 6.86 5.36 0.97 6.51 4.29 3.05 2.68 2.30 3.13 1.91 1.20 4.33 11 Ix_SR1 SilentIntronRegion 0 13.22 3.23 3.01 3.05 6.19 2.12 6.28 11.09 8.67 7.12 0.56 6.87 5.37 0.97 6.51 4.30 3.05 2.68 2.30 3.14 1.91 1.20 4.33 12 E3_Aa NovelBoundary 0 2.74 6.05 0.00 0.00 7.72 0.00 11.66 19.18 13.22 9.21 0.00 5.85 6.66 4.77 8.90 7.52 4.77 2.11 0.00 14.25 0.00 0.00 4.01 13 ER3a ExonRegion 0 5.30 2.45 0.00 2.66 7.65 0.00 6.68 7.33 7.92 0.00 0.90 8.70 5.65 0.64 4.99 2.08 3.30 1.26 1.52 4.33 1.05 0.99 4.25 14 E3_Da NovelBoundary 0 7.48 0.00 1.83 1.43 33.53 2.33 5.96 10.10 13.31 7.66 0.00 12.60 12.01 0.00 9.89 7.52 3.83 0.00 0.00 3.26 0.00 0.00 8.37 15 E3a_E4a KnownJunction 0 3.04 3.16 0.00 0.00 0.00 0.00 6.54 0.00 0.00 0.00 4.37 0.00 0.00 0.00 0.00 4.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 E4_Aa NovelBoundary 0 3.78 5.66 0.00 1.96 0.00 0.00 4.11 9.45 7.81 2.79 0.00 0.00 25.65 7.59 4.45 12.22 4.77 7.92 4.80 7.86 3.15 0.00 4.01 17 ER4a ExonRegion 0 8.26 1.45 2.39 3.55 9.18 2.56 5.32 11.72 5.81 3.79 4.28 3.20 7.68 3.89 6.38 7.02 3.26 1.56 1.72 3.06 1.00 2.47 3.68 18 E4_Da KnownBoundary 0 3.04 3.35 5.50 0.00 8.49 0.00 11.31 9.61 9.23 9.48 9.11 25.06 11.69 2.35 4.45 7.86 9.44 4.44 4.80 5.75 2.84 3.12 4.35 19 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20 ER4b ExonRegion 0 7.42 2.15 1.79 0.00 4.46 0.00 6.73 3.63 5.35 4.62 5.24 9.04 18.83 3.84 2.27 6.07 2.87 2.81 1.15 3.08 2.78 0.94 0.94 21 E4_Db NovelBoundary 0 3.78 3.35 5.59 12.05 8.66 2.38 19.61 16.80 5.56 10.64 2.68 43.51 6.98 2.24 8.90 11.88 4.58 5.97 0.00 2.75 2.59 2.82 4.27 22 Ix Intron 0 17.01 2.88 4.03 6.12 15.73 4.14 7.09 12.30 9.46 6.95 1.81 10.82 11.16 2.11 5.01 7.78 4.19 2.47 2.83 4.20 2.54 1.44 5.27 23 Ix_AR1 ActiveIntronRegion 0 18.93 3.31 6.46 6.78 19.78 4.85 9.35 14.26 14.55 9.33 0.37 15.95 15.35 1.34 4.98 5.25 1.19 2.07 3.24 4.67 1.22 1.87 3.45 24 Ix_SR2 SilentIntronRegion 0 31.38 4.41 5.57 9.54 20.53 4.50 10.17 13.27 10.22 6.12 1.53 7.33 9.67 1.47 6.33 6.77 4.57 2.12 2.03 4.75 2.05 1.44 4.95 25 E5_Aa NovelBoundary 0 32.01 0.00 1.24 13.02 15.45 0.00 4.02 18.98 6.77 3.79 0.00 32.11 0.00 4.94 0.00 4.36 12.62 0.00 0.00 9.46 0.00 0.00 3.93 26 ER5a ExonRegion 0 17.78 1.01 2.22 8.53 11.21 2.72 7.54 7.06 9.11 5.50 0.96 8.13 10.93 3.12 8.53 13.24 5.72 2.50 2.33 6.28 2.73 0.52 3.64