Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RP4-758J18.4 Gene 0 22.79 7.95 23.62 16.38 20.61 31.76 11.34 26.49 25.61 45.77 36.52 14.50 14.55 60.27 70.96 51.79 41.69 21.61 17.40 15.70 26.17 12.38 16.64 2 448629 Transcript 0 6.59 0.00 16.68 0.00 0.00 0.00 0.00 1.97 6.08 9.78 8.32 0.00 6.82 4.59 9.64 8.29 8.60 1.70 0.00 0.00 5.31 0.00 0.00 3 447725 Transcript 0 0.47 1.21 1.50 0.61 0.79 1.70 0.44 2.69 2.10 4.76 3.36 0.96 0.69 3.25 4.41 2.42 2.08 1.98 2.01 0.63 1.06 1.31 0.44 4 444362 Transcript 0 7.20 0.88 3.00 1.34 2.04 4.48 1.17 0.42 2.01 6.62 6.08 3.64 0.47 1.92 3.58 1.62 2.52 1.03 0.60 0.17 0.18 0.06 0.61 5 418833 Transcript 0 9.40 3.57 17.29 14.35 8.45 22.89 5.68 18.50 21.73 31.26 13.84 5.07 2.02 33.35 41.19 38.41 14.74 21.50 9.67 16.78 19.36 10.56 11.49 6 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.97 0.00 0.00 1.35 0.00 0.00 1.10 0.00 0.00 0.00 0.00 0.00 0.00 7 ER1b ExonRegion 0 0.00 0.00 0.00 0.00 0.00 1.83 0.00 0.00 0.00 0.00 3.87 0.00 0.00 1.62 0.00 0.00 6.60 0.00 0.00 0.00 0.00 0.00 0.00 8 ER1c ExonRegion 0 26.04 8.17 15.78 5.23 41.25 49.32 19.97 7.50 17.18 27.00 33.93 2.52 3.07 37.21 43.83 60.74 29.42 17.40 11.56 9.64 25.38 7.74 22.42 9 E1_Da KnownBoundary 0 6.37 0.00 4.55 1.63 4.16 0.00 0.00 6.12 6.25 13.59 8.84 0.00 0.00 0.00 0.00 0.00 0.00 1.66 0.00 5.88 2.22 0.00 8.11 10 E1a_E1d KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 E1_Db KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 E1b_E1e KnownJunction 0 2.82 0.00 4.97 2.06 0.00 2.90 0.00 0.00 3.39 12.17 12.16 5.85 0.00 2.47 4.45 0.00 4.77 0.00 0.00 0.00 0.00 0.00 0.00 13 E1_Dc KnownBoundary 0 0.00 0.00 0.00 3.26 0.00 0.00 0.00 4.39 4.43 2.66 2.21 0.00 0.00 5.36 4.82 3.42 8.51 0.00 0.00 0.00 5.87 2.14 7.77 14 E1c_E1e KnownJunction 0 6.59 0.00 16.68 0.00 0.00 0.00 0.00 1.97 6.08 9.78 8.32 0.00 6.82 4.59 9.64 8.29 8.60 1.70 0.00 0.00 5.31 0.00 0.00 15 ER1d ExonRegion 0 4.23 2.03 20.83 7.84 4.01 3.67 2.65 14.69 20.07 27.24 30.93 4.33 9.38 14.21 13.78 11.89 23.93 3.70 9.56 4.26 13.22 1.56 11.75 16 ER1e ExonRegion 0 2.12 0.51 13.48 6.13 2.68 1.83 2.65 10.37 12.66 16.06 22.23 0.00 4.69 12.99 10.15 8.92 25.58 2.31 6.37 5.85 14.88 2.08 11.75 17 ER1f ExonRegion 0 9.40 3.57 17.29 14.35 8.45 22.89 5.68 18.50 21.73 31.26 13.84 5.07 2.02 33.35 41.19 38.41 14.74 21.50 9.67 16.78 19.36 10.56 11.49 18 E1_Ad KnownBoundary 0 13.48 3.29 12.95 12.99 7.72 12.72 3.53 18.28 18.63 19.90 9.21 0.00 0.00 27.14 14.46 10.60 8.42 38.59 18.35 17.45 16.99 5.39 12.80 19 E1_Ae KnownBoundary 0 6.30 3.29 13.36 11.32 0.00 5.11 1.81 13.10 21.76 33.68 8.90 12.60 15.10 17.01 13.72 7.35 8.88 17.00 0.00 2.94 5.68 8.70 0.00 20 ER1g ExonRegion 0 12.70 4.07 25.73 21.64 6.69 15.36 3.97 32.62 29.33 53.90 24.89 13.53 9.97 58.47 48.23 30.09 19.81 36.72 13.14 20.48 18.46 14.32 8.81 21 ER1h ExonRegion 0 14.78 10.72 39.88 22.85 17.27 19.58 7.33 42.00 37.79 86.31 64.00 23.39 22.18 88.57 131.78 88.32 62.81 31.94 29.67 26.04 40.29 17.79 38.61 22 E1_Dd NovelBoundary 0 14.22 2.43 28.24 15.18 7.81 22.60 11.26 27.23 25.87 54.15 26.22 11.85 13.47 37.91 44.38 55.46 31.23 22.22 20.42 15.72 8.09 16.47 27.40 23 E1d_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24 E1_De NovelBoundary 1 9.71 3.35 4.73 6.49 4.33 5.34 3.93 5.59 2.92 8.57 7.00 0.00 0.00 19.54 13.97 29.48 0.00 8.42 4.24 8.56 5.93 5.76 4.27 25 E1e_E2b KnownJunction 0 17.04 9.08 26.02 14.65 24.62 13.51 4.37 29.70 34.00 49.75 38.01 0.00 12.82 74.58 65.52 53.92 31.14 32.29 13.37 0.00 20.82 17.70 12.55 26 ER1i ExonRegion 1 12.17 8.90 28.49 14.65 15.72 12.38 7.12 33.27 34.12 63.65 47.84 3.79 9.38 69.03 86.67 68.36 35.07 39.73 19.91 7.45 22.59 14.32 23.86 27 I1 Intron 0 5.63 1.80 4.86 1.80 3.56 13.01 2.94 6.85 3.27 4.55 13.72 6.32 2.08 20.08 19.98 9.23 11.71 5.30 2.83 9.44 4.89 6.47 7.81 28 I1_AR1 ActiveIntronRegion 0 5.73 1.84 4.94 1.83 3.62 13.23 2.99 6.97 3.32 4.63 13.94 6.44 2.12 20.42 20.31 9.39 11.92 5.40 2.88 9.60 4.97 6.58 7.95 29 Ix Intron 0 13.06 0.84 3.76 1.67 3.30 13.58 3.81 11.65 6.06 7.03 18.28 3.25 3.18 12.89 23.79 23.23 16.29 2.65 6.55 13.13 4.53 9.43 4.83 30 Ix_AR1 ActiveIntronRegion 0 13.27 0.85 3.82 1.70 3.36 13.80 3.87 11.83 6.16 7.14 18.58 3.30 3.23 13.09 24.16 23.58 16.53 2.70 6.66 13.34 4.61 9.58 4.91 31 E2_Aa NovelBoundary 0 20.45 3.35 2.96 3.90 24.19 25.16 0.00 11.09 10.27 19.96 2.68 12.15 0.00 19.60 10.75 7.18 20.38 6.96 0.00 10.93 0.00 3.06 10.84 32 E2_Ab NovelBoundary 0 3.63 0.00 6.33 6.83 3.74 13.34 2.25 10.93 4.28 21.06 4.84 6.30 0.00 7.30 4.45 17.09 16.83 6.92 3.67 8.37 2.84 20.70 11.18 33 ER2a ExonRegion 0 1.41 3.62 4.49 1.82 2.38 5.09 1.32 8.07 6.31 14.27 10.09 2.89 2.08 9.74 13.22 7.27 6.24 5.95 6.02 1.89 3.18 3.94 1.31 34 ER2b ExonRegion 0 46.72 17.03 44.36 34.25 40.44 64.96 21.74 59.72 55.96 95.49 84.85 36.40 37.56 133.88 144.61 100.52 100.34 42.63 39.67 26.65 44.13 26.88 30.65 35 E2_Da KnownBoundary 0 78.09 17.76 48.08 41.39 52.89 71.72 36.17 52.00 35.91 124.69 130.88 32.11 56.00 172.64 158.97 98.01 115.19 32.96 35.67 37.58 70.80 18.13 22.79 36 ER2c ExonRegion 0 42.49 13.31 48.05 37.40 40.90 62.82 28.12 46.92 43.32 83.32 86.39 20.08 38.74 143.63 157.53 81.35 97.28 26.19 32.38 34.16 66.66 25.33 40.05 37 E2_Db KnownBoundary 0 53.86 7.83 46.18 29.57 56.54 57.75 40.54 56.02 61.63 87.81 57.17 20.11 45.45 136.68 147.48 98.44 72.46 26.16 33.51 38.35 71.85 23.94 26.46 38 ER2d ExonRegion 0 32.76 12.85 41.00 24.95 33.16 44.57 17.57 44.59 37.52 74.63 57.05 28.40 26.60 99.84 120.27 80.73 71.89 31.30 26.92 24.11 46.58 17.79 18.53 39 E2_Dc KnownBoundary 1 23.56 13.42 19.57 15.68 27.08 12.78 14.26 22.76 16.44 25.20 0.00 25.51 13.64 56.74 68.24 55.71 0.00 43.48 13.27 11.25 2.90 5.57 16.48 40 ER2e ExonRegion 0 11.59 1.75 1.04 0.61 4.08 6.07 2.34 0.85 0.63 1.07 0.00 1.42 0.94 1.36 2.71 3.24 0.27 2.06 1.20 0.33 0.37 0.11 1.22