Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PTCHD2 Gene 0 1.11 5.52 12.61 8.04 0.93 9.47 8.93 6.95 6.05 7.55 1.46 0.28 0.13 0.42 0.30 0.64 0.30 57.25 29.58 8.14 1.59 2.35 0.37 2 423056 Transcript 0 1.14 1.46 1.67 0.29 0.62 2.08 4.29 0.12 0.31 0.77 1.01 0.17 0.19 0.29 0.00 0.00 0.16 7.46 10.28 1.59 0.00 0.10 0.07 3 389575 Transcript 0 0.00 0.00 0.20 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 294484 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 304391 Transcript 0 0.00 1.02 0.31 0.34 0.00 0.61 1.33 0.00 0.31 0.29 0.00 0.00 0.00 0.00 0.49 0.00 0.00 1.23 0.53 0.36 0.00 0.00 0.00 6 IG47_AR1 ActiveIntergenicRegion 0 0.34 1.50 4.08 4.47 0.22 0.30 0.11 0.00 0.45 0.28 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.15 21.05 4.32 0.00 0.00 0.00 7 ER1a ExonRegion 0 2.96 1.42 2.37 0.00 1.87 1.28 7.40 0.00 0.00 0.83 1.35 0.00 0.00 0.00 0.00 0.00 0.00 8.53 22.25 3.38 0.00 0.00 0.00 8 E1_Ab KnownBoundary 0 0.00 0.00 2.66 0.00 0.00 0.00 0.00 0.00 0.00 1.48 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13.39 0.00 2.81 0.00 0.00 0.00 9 ER1b ExonRegion 0 0.00 1.52 2.20 1.70 0.00 0.60 1.89 0.00 1.23 1.69 1.47 0.00 1.47 0.44 0.00 0.60 0.00 17.59 16.95 5.56 0.00 0.08 0.00 10 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 2.90 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.53 3.67 0.00 0.00 0.00 0.00 11 E1a_E3a KnownJunction 0 0.00 0.00 0.00 5.59 0.00 2.73 3.71 0.00 2.55 6.04 0.00 0.00 0.00 0.00 0.00 4.36 0.00 81.12 108.33 6.52 0.00 0.00 0.00 12 ER2a ExonRegion 0 0.46 2.96 2.65 0.88 0.00 2.06 5.48 0.37 0.93 1.49 1.68 0.52 0.56 0.86 0.00 0.00 0.48 4.31 4.91 1.38 0.00 0.30 0.21 13 ER3a ExonRegion 0 0.49 3.30 7.16 3.70 0.87 6.36 6.61 1.94 4.80 7.29 1.52 0.73 0.18 0.19 0.19 0.34 0.15 68.68 32.03 10.80 1.33 2.50 0.41 14 E3a_E4a KnownJunction 0 0.00 6.38 10.70 4.00 0.00 10.90 18.02 6.04 12.85 16.57 0.00 0.00 0.00 0.00 0.00 0.00 0.00 96.21 27.20 14.13 0.00 0.00 0.00 15 ER4a ExonRegion 0 0.98 8.70 11.21 7.63 1.24 12.92 14.32 6.40 12.11 13.84 3.22 0.00 0.00 0.31 0.67 2.63 0.00 112.30 44.09 10.54 0.65 2.22 0.00 16 E4a_E5a KnownJunction 0 0.00 8.29 12.51 6.76 0.00 42.02 13.82 1.64 20.08 16.52 2.11 0.00 0.00 0.00 0.00 3.42 0.00 86.51 48.94 11.95 2.78 5.63 0.00 17 ER5a ExonRegion 0 0.00 9.28 14.05 10.26 0.00 23.72 22.67 15.35 14.41 12.88 3.22 0.00 0.00 0.50 0.00 2.99 0.96 166.49 54.78 12.75 1.42 5.09 1.11 18 E5_Da NovelBoundary 0 3.63 3.35 0.00 0.00 0.00 0.00 2.25 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16.83 0.00 0.00 0.00 0.00 0.00 19 E5a_E6a KnownJunction 0 0.00 13.62 21.88 13.75 4.33 28.22 17.89 16.84 7.49 7.63 4.95 0.00 0.00 0.00 0.00 12.73 3.93 135.55 125.84 8.44 0.00 2.82 8.71 20 ER6a ExonRegion 0 1.14 9.79 15.28 15.54 0.00 15.97 11.86 23.57 11.45 12.01 2.89 0.00 0.00 1.25 0.00 4.25 3.57 117.09 55.02 15.81 1.34 5.48 1.09 21 E6a_E7a KnownJunction 0 11.34 23.42 21.76 18.15 0.00 22.71 21.11 17.25 12.90 12.30 4.37 0.00 0.00 2.30 0.00 4.02 4.58 140.03 42.26 26.46 3.15 12.00 0.00 22 ER7a ExonRegion 0 3.12 10.62 25.05 14.97 2.19 15.97 12.30 21.93 7.83 13.08 1.48 0.00 0.00 1.47 0.00 2.53 2.46 98.72 47.56 15.36 1.49 3.22 1.86 23 E7a_E8a KnownJunction 0 0.00 18.55 27.02 13.38 4.33 26.18 9.27 8.13 5.79 16.12 0.00 0.00 0.00 0.00 0.00 0.00 0.00 90.20 41.41 14.76 2.72 0.00 0.00 24 ER8a ExonRegion 0 3.14 11.46 19.29 9.28 0.40 14.75 8.97 10.11 4.45 11.80 0.70 0.00 0.00 0.02 0.00 2.17 0.00 81.72 39.18 9.59 2.58 0.91 0.00 25 E8a_E9a KnownJunction 0 2.89 15.85 12.63 7.33 0.00 8.35 16.83 13.47 12.27 11.31 0.00 0.00 0.00 0.00 0.00 0.00 0.00 103.55 34.35 5.94 0.00 3.00 0.00 26 ER9a ExonRegion 0 3.95 8.90 18.98 10.48 0.00 6.17 12.03 5.72 5.46 12.32 2.79 0.00 0.00 0.00 2.78 0.82 0.00 87.23 28.58 9.48 2.34 0.80 0.00 27 E9a_E10a KnownJunction 0 3.78 7.63 23.09 16.78 0.00 13.12 3.93 6.24 13.31 5.69 2.42 0.00 0.00 0.00 0.00 3.42 0.00 109.19 33.51 8.50 0.00 2.57 0.00 28 ER10a ExonRegion 0 0.26 8.54 10.95 6.11 0.84 10.30 5.65 5.41 8.40 8.39 2.91 1.12 0.00 0.84 1.65 0.18 0.00 50.48 24.52 10.13 2.11 3.07 0.00 29 E10_Da NovelBoundary 0 3.04 3.03 2.66 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24.75 8.00 0.00 0.00 0.00 0.00 30 E10a_E11a KnownJunction 0 0.00 16.44 11.86 8.66 0.00 15.16 10.60 5.75 8.54 5.51 0.00 0.00 0.00 0.00 4.45 0.00 0.00 45.64 16.85 9.01 0.00 0.00 0.00 31 ER11a ExonRegion 0 0.81 4.69 9.21 6.27 0.00 7.69 12.66 5.30 7.37 6.25 0.61 0.00 0.00 1.26 0.30 0.64 0.00 44.32 30.44 7.88 3.39 1.83 0.92 32 E11a_E12a KnownJunction 0 3.11 2.50 19.37 9.72 0.00 5.74 7.91 7.80 13.08 8.95 0.00 0.00 0.00 0.00 0.00 4.02 0.00 46.05 64.66 11.63 0.00 2.57 0.00 33 ER12a ExonRegion 0 0.74 4.91 13.12 6.35 0.00 13.14 8.93 12.77 7.69 9.81 0.00 0.00 0.00 0.60 0.00 0.42 0.00 52.90 32.89 8.16 5.63 1.39 1.31 34 E12a_E13a KnownJunction 0 0.00 12.23 7.69 7.62 0.00 37.02 11.39 17.05 7.15 12.87 0.00 0.00 0.00 0.00 0.00 0.00 0.00 84.98 33.13 5.69 8.22 2.76 0.00 35 ER13a ExonRegion 0 0.15 5.39 15.38 8.61 1.00 17.55 8.24 13.31 7.78 6.57 0.72 0.00 0.00 0.00 0.00 1.11 0.00 47.29 45.73 6.27 5.05 2.11 1.09 36 E13a_E14a KnownJunction 0 3.04 3.09 7.21 6.76 0.00 7.04 4.42 14.46 10.53 8.76 0.00 0.00 0.00 0.00 0.00 0.00 0.00 45.06 99.01 2.68 8.90 0.00 0.00 37 ER14a ExonRegion 0 2.22 3.99 17.26 8.38 0.74 10.89 8.26 7.07 8.02 6.92 1.07 0.00 0.00 0.00 0.56 0.00 0.00 53.98 44.22 3.84 3.13 3.45 0.00 38 E14a_E15a KnownJunction 0 0.00 21.84 30.99 14.12 0.00 18.46 14.49 13.76 7.84 10.91 0.00 0.00 0.00 0.00 0.00 0.00 0.00 90.12 85.93 12.53 0.00 0.00 0.00 39 ER15a ExonRegion 0 0.00 8.94 21.70 10.83 1.04 12.82 7.01 12.06 5.77 7.12 0.00 0.76 0.00 0.00 0.38 0.00 0.00 86.44 33.97 5.99 2.57 1.61 0.00 40 E15a_E16a KnownJunction 0 0.00 10.92 26.94 18.71 0.00 9.82 13.47 9.69 2.63 8.33 0.00 6.30 0.00 0.00 4.45 0.00 0.00 105.04 46.59 0.00 0.00 5.82 0.00 41 ER16a ExonRegion 0 2.50 6.34 19.47 6.61 3.16 13.72 9.16 6.54 5.62 5.89 0.57 0.48 0.00 0.00 0.32 0.00 0.97 54.49 32.26 8.15 1.83 2.14 0.87 42 E16_Da NovelBoundary 0 0.00 0.00 4.52 7.49 3.99 0.00 0.00 6.90 0.00 1.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23.21 8.75 6.20 0.00 0.00 0.00 43 E16a_E17a KnownJunction 0 0.00 8.81 9.82 5.53 0.00 15.28 9.01 11.42 4.20 4.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 47.17 8.94 0.00 2.47 3.12 0.00 44 I16 Intron 0 0.57 2.19 2.46 3.39 0.43 3.06 3.07 1.94 1.29 1.47 0.21 0.00 0.00 0.06 0.00 0.32 0.00 14.25 6.18 2.98 0.47 0.34 0.16 45 I16_SR1 SilentIntronRegion 0 0.54 2.34 2.61 3.56 0.46 3.17 3.24 1.90 1.33 1.55 0.22 0.00 0.00 0.07 0.00 0.34 0.00 14.54 6.00 3.06 0.51 0.36 0.17 46 E17_Aa NovelBoundary 0 0.00 3.35 7.21 7.49 0.00 0.00 10.69 2.30 1.56 0.00 2.68 0.00 0.00 0.00 0.00 0.00 0.00 24.33 12.71 5.94 0.00 0.00 0.00 47 ER17a ExonRegion 0 1.70 11.93 22.14 12.24 0.00 12.27 13.63 8.19 9.17 1.30 2.09 1.43 0.00 0.46 0.00 1.19 0.96 65.22 38.20 7.27 1.25 3.79 1.27 48 E17_Da NovelBoundary 0 0.00 0.00 1.33 5.69 0.00 0.00 1.94 1.73 1.65 1.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24.87 0.00 0.00 0.00 2.94 0.00 49 E17a_E18a KnownJunction 0 0.00 17.89 20.90 9.92 0.00 4.32 14.93 10.72 6.68 4.94 2.47 0.00 0.00 0.00 0.00 0.00 4.21 59.36 31.62 16.81 2.66 0.00 0.00 50 I17 Intron 0 0.41 2.54 2.98 4.29 1.03 2.82 4.83 2.72 0.88 3.28 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.56 6.74 1.84 0.63 0.60 0.28 51 I17_SR1 SilentIntronRegion 0 0.41 2.55 2.99 4.31 1.03 2.83 4.85 2.73 0.89 3.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.61 6.76 1.85 0.64 0.60 0.28 52 E18_Aa NovelBoundary 0 0.00 2.83 0.00 5.46 0.00 4.66 3.67 1.97 1.79 6.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 33.20 4.61 2.43 0.00 0.00 0.00 53 ER18a ExonRegion 0 0.00 8.51 13.84 9.95 0.00 18.33 11.45 8.76 8.68 6.36 2.24 0.00 0.00 0.93 0.00 0.00 0.32 65.25 29.61 8.36 1.36 2.13 0.95 54 E18a_E20a KnownJunction 0 0.00 7.83 35.66 17.51 0.00 9.99 16.61 8.71 10.33 5.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 89.00 71.15 16.55 0.00 5.88 0.00 55 E19_Aa NovelBoundary 0 0.00 0.00 4.97 3.46 0.00 0.00 5.96 2.30 1.79 2.93 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24.25 0.00 0.00 0.00 0.00 0.00 56 ER19a ExonRegion 0 0.00 2.05 0.61 0.68 0.00 1.22 2.66 0.00 0.62 0.57 0.00 0.00 0.00 0.00 0.97 0.00 0.00 2.47 1.07 0.71 0.00 0.00 0.00 57 E19a_E20a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 58 E20_Aa NovelBoundary 0 0.00 3.29 1.15 10.65 3.14 0.00 21.07 2.30 0.00 1.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20.10 3.95 8.56 0.00 0.00 0.00 59 ER20a ExonRegion 0 0.69 8.81 28.51 14.26 3.48 19.74 16.35 6.91 6.29 9.82 0.00 0.00 0.00 1.31 0.00 0.97 0.00 80.46 38.63 11.22 2.54 5.45 0.00 60 E20a_E21a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 61 E20b_E22a KnownJunction 0 0.00 15.66 16.20 21.64 0.00 10.73 21.77 8.71 5.90 12.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 115.78 59.67 9.33 3.15 5.63 0.00 62 E20b_E23a NovelJunction 0 0.00 0.00 19.60 7.06 0.00 2.27 2.16 1.81 3.10 2.90 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.27 8.75 2.94 0.00 0.00 0.00 63 ER20b ExonRegion 0 0.00 12.20 20.52 17.72 4.01 7.34 20.52 6.91 8.65 10.32 1.93 0.00 0.00 0.00 0.00 0.00 0.00 111.79 54.95 9.04 4.41 4.17 0.00 64 E21a_E22a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 65 ER21a ExonRegion 0 0.00 0.00 0.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 66 ER22a ExonRegion 0 0.95 11.29 16.40 14.85 4.01 17.34 17.55 10.40 7.43 7.90 0.80 0.00 0.00 0.00 0.00 1.33 0.00 96.05 39.29 7.47 3.27 5.68 0.00 67 E22a_E23a KnownJunction 0 0.00 9.67 11.62 11.89 4.33 9.09 11.39 7.23 3.73 5.83 0.00 0.00 0.00 0.00 0.00 4.36 0.00 106.16 4.05 0.00 0.00 2.45 0.00 68 E23_Aa NovelBoundary 0 0.00 3.03 0.00 5.39 0.00 0.00 2.25 2.30 0.00 1.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.45 13.08 0.00 0.00 0.00 0.00 69 ER23a ExonRegion 0 0.00 5.03 18.23 19.81 1.27 12.13 9.22 10.92 4.49 9.20 1.77 0.00 0.00 0.00 0.63 0.00 0.00 76.95 43.41 9.94 0.67 2.43 0.00 70 E23_Da NovelBoundary 0 0.00 3.03 8.49 7.09 4.33 5.79 17.53 2.55 2.66 2.90 2.53 0.00 0.00 0.00 0.00 0.00 0.00 30.51 8.85 15.08 0.00 0.00 0.00 71 E23a_E24a KnownJunction 0 0.00 0.00 18.36 15.48 0.00 10.68 10.64 7.97 2.46 7.23 0.00 0.00 0.00 0.00 0.00 0.00 0.00 78.51 21.27 4.99 0.00 0.00 0.00 72 I23 Intron 0 0.38 3.08 9.12 3.62 0.00 3.76 6.14 3.22 2.63 3.20 0.00 0.00 0.00 0.00 0.00 0.27 0.00 18.84 12.50 4.36 0.00 0.00 0.52 73 I23_SR1 SilentIntronRegion 0 0.38 3.09 9.15 3.63 0.00 3.77 6.16 3.23 2.63 3.21 0.00 0.00 0.00 0.00 0.00 0.27 0.00 18.91 12.54 4.37 0.00 0.00 0.53 74 E24_Aa NovelBoundary 0 0.00 0.00 14.90 6.19 0.00 5.79 3.93 0.00 1.56 2.90 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16.71 0.00 3.26 0.00 0.00 0.00 75 ER24a ExonRegion 0 2.36 5.57 21.20 15.34 1.82 10.95 10.95 13.05 8.85 11.69 1.53 0.00 0.00 0.41 0.35 0.34 0.00 54.48 30.28 10.78 1.63 3.64 0.14 76 E24_Da KnownBoundary 0 3.26 6.25 1.69 8.89 0.00 5.45 1.77 2.05 2.84 9.80 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26.07 26.17 0.00 0.00 2.27 3.33 77 ER24b ExonRegion 0 0.38 1.85 4.18 4.96 0.00 4.09 3.06 1.56 3.82 4.61 0.55 0.00 0.00 0.00 0.00 0.00 0.00 11.17 15.29 2.45 1.86 0.93 0.07 78 ER24c ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00