Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 HES4 Gene 0 3.67 1.11 76.72 19.55 5.37 4.27 10.45 29.96 43.07 32.28 4.50 0.65 0.35 6.52 19.68 1.08 0.60 12.86 0.00 31.74 0.10 8.46 5.89 2 428771 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 484667 Transcript 0 0.00 2.03 1.84 1.36 0.00 0.00 1.32 1.73 1.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.92 0.00 1.06 0.00 0.00 0.00 4 304952 Transcript 0 0.00 0.00 22.89 15.12 0.00 0.00 2.25 15.53 14.99 30.89 7.84 0.00 0.00 9.89 28.31 4.36 0.00 10.20 0.00 21.22 0.00 9.37 0.00 5 481869 Transcript 0 4.29 2.55 140.44 35.06 6.74 4.78 11.36 30.85 48.61 48.71 1.49 0.00 0.06 7.40 19.54 2.60 4.26 15.34 0.00 38.49 0.00 8.94 4.57 6 IG32 Intergenic 0 1.43 0.17 1.77 8.71 4.01 0.36 2.58 4.21 14.02 5.12 0.18 0.04 0.30 0.90 2.86 0.13 0.08 4.37 0.30 8.07 0.13 1.00 2.14 7 IG32_SR3 SilentIntergenicRegion 0 1.52 0.21 1.60 9.11 4.41 0.28 2.75 4.73 15.00 5.17 0.20 0.05 0.24 0.85 2.55 0.09 0.07 4.66 0.13 8.28 0.16 0.93 2.08 8 ER1a ExonRegion 0 0.00 0.00 0.65 1.38 0.00 0.09 3.42 0.03 3.71 1.17 0.34 0.00 0.00 0.05 0.00 0.00 0.00 5.57 0.00 3.77 0.00 0.00 4.83 9 E1_Ab KnownBoundary 0 0.00 0.00 3.49 3.66 0.00 0.00 6.54 0.00 8.22 3.04 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.71 0.00 2.68 0.00 0.00 0.00 10 E1_Ac KnownBoundary 0 3.41 0.00 0.00 3.90 3.90 7.84 16.30 3.57 2.89 2.66 7.69 0.00 0.00 2.71 0.00 0.00 0.00 11.90 0.00 8.88 0.00 0.00 3.93 11 ER1b ExonRegion 0 0.00 0.00 1.23 2.73 0.00 5.50 7.41 4.49 4.86 3.52 3.74 0.00 0.00 1.73 0.00 0.00 0.00 8.75 0.00 7.80 0.00 0.00 0.00 12 ER1c ExonRegion 0 4.69 0.45 17.71 4.81 2.37 4.09 4.96 12.11 11.77 12.94 3.92 0.00 0.00 4.22 9.45 1.65 0.04 3.02 0.00 12.66 0.00 2.49 3.95 13 E1_Da KnownBoundary 0 0.00 0.00 56.89 5.56 0.00 0.00 0.00 11.42 23.55 13.14 2.42 0.00 0.00 4.77 0.00 0.00 0.00 4.15 0.00 27.23 0.00 6.25 0.00 14 E1a_E1d KnownJunction 0 0.00 0.00 22.89 15.12 0.00 0.00 2.25 15.53 14.99 30.89 7.84 0.00 0.00 9.89 28.31 4.36 0.00 10.20 0.00 21.22 0.00 9.37 0.00 15 E1a_E1e NovelJunction 0 0.00 0.00 14.16 3.83 0.00 0.00 0.00 0.00 6.34 0.00 0.00 0.00 0.00 2.47 4.45 0.00 0.00 4.60 0.00 11.57 0.00 0.00 3.33 16 ER1d ExonRegion 0 4.42 1.39 79.31 12.58 2.03 1.88 9.20 17.02 34.29 20.28 3.25 2.41 0.00 3.82 14.25 0.04 1.25 7.60 0.00 23.89 0.00 5.01 9.74 17 E1_Ad KnownBoundary 0 7.19 0.00 153.66 34.69 3.74 2.84 18.11 42.14 69.53 51.90 2.37 12.60 0.00 4.89 26.82 0.00 4.77 16.66 0.00 44.36 0.00 5.08 11.78 18 ER1e ExonRegion 0 3.92 2.18 197.41 62.25 15.46 11.16 32.39 73.10 111.88 72.38 5.45 1.82 0.49 14.62 46.91 3.38 2.40 24.37 0.00 69.16 0.00 14.85 11.56 19 E1_Db KnownBoundary 0 5.78 5.99 156.91 59.20 27.59 2.90 30.83 39.92 58.19 39.16 2.63 0.00 0.00 9.89 14.09 4.19 0.00 8.29 0.00 41.93 0.00 11.21 3.93 20 E1b_E1e KnownJunction 0 0.00 0.00 55.17 21.14 6.96 4.49 5.52 25.63 44.15 23.75 4.69 0.00 6.66 16.78 28.56 0.00 0.00 10.57 0.00 29.40 0.00 7.78 8.11 21 ER1f ExonRegion 0 4.29 2.55 140.44 35.06 6.74 4.78 11.36 30.85 48.61 48.71 1.49 0.00 0.06 7.40 19.54 2.60 4.26 15.34 0.00 38.49 0.00 8.94 4.57 22 E1_Ae KnownBoundary 0 2.74 0.00 129.89 24.67 0.00 10.11 11.92 26.21 41.46 38.71 2.58 0.00 0.00 0.00 30.53 0.00 0.00 16.08 0.00 35.47 0.00 11.08 3.93 23 ER1g ExonRegion 0 4.43 0.00 176.59 49.53 5.20 3.31 7.81 65.14 97.56 73.55 8.91 2.09 1.67 15.25 55.22 1.74 0.00 33.00 0.00 66.37 0.00 24.48 10.19 24 E1_Dc NovelBoundary 0 0.00 0.00 44.08 0.00 0.00 0.00 0.00 0.00 1.62 0.00 0.00 0.00 0.00 0.00 4.45 0.00 0.00 6.05 0.00 2.49 0.00 6.06 0.00 25 E1c_E2a KnownJunction 0 10.22 0.00 183.46 77.98 11.46 0.00 6.18 54.63 136.08 76.83 5.32 0.00 0.00 17.19 78.13 0.00 0.00 42.32 0.00 81.49 0.00 36.99 11.01 26 E2_Aa NovelBoundary 0 0.00 0.00 51.89 0.00 0.00 0.00 2.03 6.86 14.99 5.32 0.00 0.00 0.00 0.00 11.25 0.00 0.00 1.58 0.00 2.43 2.29 0.00 0.00 27 ER2a ExonRegion 0 3.38 1.32 64.56 14.19 6.09 3.98 10.35 30.48 41.69 30.54 5.10 0.39 0.42 5.75 16.89 0.32 0.00 13.28 0.00 31.99 0.24 9.08 4.85 28 ER2b ExonRegion 0 0.00 2.03 4.90 2.73 0.00 3.67 2.65 5.19 6.18 1.15 0.00 0.00 0.00 1.62 2.90 0.00 0.00 1.85 0.00 2.13 0.00 2.08 0.00 29 ER2c ExonRegion 0 0.00 2.03 4.90 2.73 0.00 3.67 2.65 3.46 3.71 0.00 0.00 0.00 0.00 1.62 2.90 0.00 0.00 1.85 0.00 2.13 0.00 0.00 0.00 30 ER2d ExonRegion 0 0.00 2.03 1.84 1.36 0.00 0.00 1.32 1.73 1.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.92 0.00 1.06 0.00 0.00 0.00 31 IG31 Intergenic 0 1.31 0.20 24.10 0.63 2.62 0.18 2.13 6.90 7.15 4.08 0.06 0.11 0.04 0.19 0.51 0.03 0.00 1.37 0.03 3.00 0.04 0.56 0.65 32 IG31_SR1 SilentIntergenicRegion 0 1.31 0.20 24.11 0.63 2.62 0.18 2.13 6.90 7.16 4.08 0.06 0.11 0.04 0.19 0.51 0.03 0.00 1.37 0.03 3.00 0.04 0.56 0.65