Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 KLHL17 Gene 0 15.90 7.27 31.80 65.57 18.01 58.90 13.40 40.51 30.64 75.10 55.78 13.15 14.55 63.74 65.12 31.12 29.06 61.88 22.68 24.55 41.44 41.51 56.42 2 455747 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 338591 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 473277 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 463212 Transcript 0 4.32 3.30 18.87 26.68 5.66 26.10 7.53 21.65 19.70 48.37 25.56 10.67 11.63 38.46 28.18 18.71 15.50 27.43 7.06 8.98 26.82 19.98 28.00 6 466300 Transcript 0 16.42 1.17 7.81 21.34 5.30 22.21 4.83 18.07 14.85 30.32 25.09 0.80 0.00 32.62 32.06 16.59 17.45 27.80 9.20 9.31 13.79 27.73 24.61 7 481067 Transcript 0 12.70 3.72 25.05 49.64 13.73 34.03 10.56 22.74 13.35 50.14 34.43 6.18 7.89 49.01 40.97 21.87 22.19 38.95 14.18 16.13 22.66 27.40 29.53 8 ER1a ExonRegion 0 0.00 0.00 1.32 0.06 1.15 7.00 0.17 0.01 1.22 0.83 7.67 0.00 0.00 0.66 2.63 1.27 8.71 2.10 0.00 1.73 5.24 0.39 9.33 9 E1_Da KnownBoundary 0 0.00 0.00 4.44 0.00 0.00 11.36 2.03 2.51 5.84 2.79 2.11 0.00 0.00 0.00 0.00 0.00 3.55 10.45 0.00 6.52 3.15 3.06 11.69 10 E1a_E2c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 ER1b ExonRegion 0 0.02 0.66 0.31 0.00 0.00 5.06 0.50 1.73 1.43 1.32 12.05 0.00 0.00 2.79 2.96 2.88 5.14 2.96 0.00 2.40 2.90 1.75 4.61 12 E1b_E2a KnownJunction 0 0.00 3.29 0.00 0.00 0.00 0.00 0.00 1.77 0.00 3.14 10.53 5.25 0.00 2.30 9.02 19.31 0.00 0.00 0.00 0.00 0.00 0.00 7.43 13 I1_AR1 ActiveIntronRegion 0 0.00 0.32 1.94 3.56 0.00 6.37 0.63 8.62 2.35 12.21 12.27 1.54 0.62 14.71 7.97 4.98 8.14 13.00 3.55 1.70 9.48 3.76 11.71 14 E2_Aa NovelBoundary 0 14.45 3.09 8.25 19.11 0.00 23.34 2.25 23.54 12.33 40.59 18.53 0.00 39.12 26.19 18.54 11.28 4.02 46.10 8.47 5.94 28.73 9.37 50.96 15 ER2a ExonRegion 0 9.38 5.41 17.79 23.20 8.93 34.34 5.51 27.70 13.17 44.44 52.48 9.27 14.34 66.09 52.83 21.85 23.57 46.16 18.48 22.29 35.91 30.23 58.68 16 E2_Ab KnownBoundary 0 10.30 9.27 41.66 69.02 19.61 42.25 17.05 57.13 44.96 101.54 105.18 11.10 13.64 81.70 64.65 33.58 31.14 119.47 17.51 49.28 72.65 49.54 60.27 17 ER2b ExonRegion 0 5.51 4.46 61.10 101.04 12.31 67.17 8.46 80.75 55.78 128.56 103.66 34.09 40.98 108.99 107.71 38.29 35.00 122.79 38.13 41.21 67.29 52.61 100.16 18 E2_Da KnownBoundary 0 10.37 3.16 23.21 33.23 3.82 36.51 7.91 51.01 30.53 82.12 46.33 30.01 19.48 71.05 23.61 30.68 8.60 58.28 7.53 19.81 25.08 26.94 79.99 19 E2a_E2c KnownJunction 1 0.00 9.14 38.61 81.94 0.00 45.88 2.25 61.57 43.92 79.30 64.33 0.00 6.82 37.38 52.41 12.99 35.72 70.80 24.85 52.73 56.22 67.48 86.47 20 ER2c ExonRegion 0 6.16 5.65 28.14 28.48 4.48 28.41 8.75 38.47 27.08 81.74 32.83 19.12 13.70 62.03 39.19 23.43 16.16 47.32 10.42 10.06 21.38 29.85 36.12 21 E2_Ac KnownBoundary 0 7.26 8.62 31.25 43.55 4.33 39.18 12.41 39.18 33.19 89.21 40.59 6.00 20.94 55.27 59.46 35.46 9.44 69.77 20.71 15.08 32.56 16.66 36.96 22 ER2d ExonRegion 0 12.42 8.42 54.69 108.10 23.73 76.25 17.26 85.57 53.99 140.42 110.05 22.22 33.72 90.09 97.37 57.33 47.28 126.61 32.41 42.64 67.71 75.18 96.06 23 E2_Db NovelBoundary 0 3.70 0.00 23.24 19.21 0.00 56.56 10.42 33.15 16.09 31.11 15.27 11.55 5.84 29.78 14.09 11.45 3.74 34.86 0.00 5.69 16.31 23.45 23.73 24 E2b_E3a KnownJunction 0 9.78 11.18 34.33 87.20 14.60 58.94 16.08 52.16 34.78 95.49 62.12 35.86 61.85 63.87 105.20 40.93 41.98 109.27 41.41 14.25 46.58 48.86 110.80 25 I2 Intron 0 0.00 0.00 0.00 0.00 1.82 4.99 3.60 0.00 0.00 0.00 9.20 2.42 4.88 8.25 12.30 10.11 4.49 3.77 0.00 0.00 10.49 0.00 0.00 26 I2_AR1 ActiveIntronRegion 0 0.00 0.00 0.00 0.00 1.87 5.12 3.70 0.00 0.00 0.00 9.43 2.49 5.01 8.48 12.64 10.30 4.61 3.87 0.00 0.00 10.69 0.00 0.00 27 E3_Aa NovelBoundary 0 3.78 2.70 7.75 6.29 3.74 24.59 2.25 28.05 8.10 30.52 7.16 13.80 20.94 17.60 15.58 11.71 0.00 28.56 4.52 2.49 16.62 11.21 7.85 28 ER3a ExonRegion 0 9.91 7.28 45.22 100.96 15.93 73.87 14.59 82.27 57.74 146.19 95.10 36.82 29.62 92.30 86.04 50.08 45.31 119.16 34.55 39.54 71.84 74.47 95.56 29 E3_Da KnownBoundary 0 17.11 8.22 26.34 85.44 27.84 117.03 26.19 76.19 51.76 140.51 72.12 54.17 46.43 96.36 58.35 47.85 33.94 54.68 51.58 23.91 73.52 106.55 92.88 30 E3a_E3b KnownJunction 0 0.00 3.35 25.25 43.45 28.52 49.97 10.55 25.84 18.66 36.32 26.80 0.00 0.00 27.67 19.66 11.71 14.03 64.38 13.08 5.37 11.49 20.88 25.69 31 ER3b ExonRegion 0 10.17 2.42 10.24 23.36 10.50 37.61 6.92 20.06 15.19 44.61 28.98 20.65 37.94 47.16 36.04 17.95 24.49 15.23 10.92 12.16 40.71 28.18 35.74 32 E3_Db KnownBoundary 0 10.67 3.35 26.14 47.85 20.29 40.83 15.90 12.03 21.53 44.35 36.59 12.60 13.15 40.32 43.88 18.29 25.90 18.07 7.25 21.73 43.86 20.51 42.94 33 ER3c ExonRegion 0 6.81 4.24 27.43 49.03 12.51 49.36 13.10 26.49 29.90 61.41 42.17 12.88 21.19 51.50 41.63 32.69 30.34 33.13 10.75 16.89 59.08 28.92 47.87 34 E3_Ab KnownBoundary 0 18.08 2.57 27.41 62.73 29.12 50.26 9.94 40.58 36.92 73.23 41.12 19.81 20.94 63.98 46.48 46.40 21.22 33.08 17.79 15.72 80.68 25.78 43.71 35 ER3d ExonRegion 0 7.30 7.64 37.28 86.44 29.50 78.70 17.29 53.24 43.28 79.61 66.78 26.50 23.09 87.84 73.48 46.89 32.67 74.29 12.77 37.62 69.63 49.47 72.68 36 E3_Dc NovelBoundary 0 0.00 2.50 11.71 21.41 7.81 10.45 2.25 6.65 9.78 20.93 4.53 0.00 6.82 6.95 8.90 0.00 4.77 3.40 8.85 0.00 11.00 0.00 0.00 37 E3c_E4a KnownJunction 0 13.85 9.14 17.68 41.92 14.69 22.03 12.81 34.71 24.42 53.83 53.22 6.30 0.00 42.56 32.51 12.30 26.55 66.28 0.00 31.32 45.10 49.35 35.60 38 ER3e ExonRegion 0 0.00 0.00 1.05 2.53 0.00 0.52 0.76 0.00 2.12 1.97 1.66 0.00 0.00 1.86 3.73 0.00 0.00 1.85 0.00 0.00 0.00 1.19 0.00 39 I3 Intron 0 5.28 2.30 12.00 23.02 8.48 38.24 5.70 11.68 10.85 29.05 7.01 0.81 0.75 15.69 10.52 5.39 1.50 8.53 7.22 6.75 11.99 8.97 9.98 40 I3_SR1 SilentIntronRegion 0 4.14 2.02 13.26 25.27 10.05 43.36 4.81 13.38 11.70 31.97 8.90 1.38 0.68 19.94 10.51 8.04 2.55 8.01 4.68 6.82 12.52 8.73 5.83 41 I3_AR1 ActiveIntronRegion 0 7.05 2.77 10.45 20.25 6.38 31.64 7.11 9.46 9.85 25.47 4.42 0.00 0.88 9.83 10.78 1.67 0.00 9.48 11.06 6.80 11.48 9.52 16.23 42 E4_Aa NovelBoundary 0 10.74 0.00 11.89 15.38 3.40 29.70 4.06 21.77 14.38 39.92 2.68 0.00 6.82 31.14 13.85 0.00 12.72 13.85 0.00 12.53 8.59 2.69 32.52 43 E4_Ab NovelBoundary 0 10.30 2.70 28.98 67.29 11.88 65.64 12.90 42.88 15.89 66.11 57.75 12.60 6.82 31.73 38.07 20.17 39.74 79.26 8.75 17.19 30.95 43.48 51.05 44 ER4a ExonRegion 0 8.38 6.69 25.43 53.78 10.26 43.25 12.69 38.31 23.62 59.40 52.51 11.18 2.93 46.22 35.90 18.20 39.89 68.52 6.64 23.32 41.87 44.80 47.60 45 ER4b ExonRegion 0 9.68 10.60 35.16 69.07 16.58 70.20 18.10 50.09 34.32 75.00 57.62 7.68 6.59 74.47 64.64 41.63 31.74 83.66 27.28 26.81 50.02 41.94 62.63 46 E4_Da NovelBoundary 0 3.63 6.58 3.31 15.58 0.00 14.93 2.21 17.87 6.74 18.08 7.00 0.00 6.82 4.71 4.45 8.37 4.68 37.93 3.86 5.56 6.18 5.63 0.00 47 E4a_E5a KnownJunction 0 16.15 0.00 6.03 15.28 3.99 13.80 2.25 19.06 15.80 23.77 23.64 0.00 0.00 27.43 18.54 16.49 13.18 16.71 3.86 0.00 19.83 13.90 15.62 48 E4a_E5b KnownJunction 0 6.15 0.00 21.38 41.89 18.08 99.26 18.46 34.26 18.34 52.09 23.74 5.85 0.00 29.73 13.35 3.25 4.21 58.99 14.40 9.01 23.91 22.41 39.35 49 ER5a ExonRegion 0 8.22 0.16 2.89 10.66 3.67 19.96 6.06 14.38 9.45 20.82 16.21 2.39 0.00 27.21 27.19 17.99 14.47 24.42 19.52 0.14 15.62 24.17 22.36 50 E5_Ab KnownBoundary 0 6.82 0.00 5.71 18.38 7.39 37.99 8.66 21.36 11.17 30.25 26.64 0.00 0.00 19.37 19.66 23.41 13.93 26.41 13.27 0.00 19.34 14.39 11.69 51 ER5b ExonRegion 0 13.58 9.35 18.98 32.10 9.63 88.79 11.45 33.45 22.64 62.82 52.32 6.55 6.87 64.86 58.77 24.81 23.93 56.77 25.53 23.42 44.23 34.18 49.05 52 E5_Da NovelBoundary 0 14.60 0.00 1.60 6.63 8.06 16.58 2.21 7.39 13.11 25.12 13.58 5.85 0.00 19.01 24.60 22.73 13.74 29.76 3.76 8.88 16.49 3.12 7.68 53 E5a_E6a KnownJunction 0 13.26 15.19 15.49 35.03 19.19 68.94 10.16 37.58 21.76 66.05 67.17 12.60 0.00 40.44 46.73 19.74 21.41 59.40 34.35 24.86 34.60 30.49 65.56 54 E6_Aa NovelBoundary 0 20.60 0.00 4.88 9.02 3.74 48.32 12.37 9.86 9.92 21.14 26.22 0.00 13.47 28.90 39.06 32.21 4.77 41.66 0.00 11.89 18.84 14.02 15.96 55 ER6a ExonRegion 0 22.17 7.44 24.21 48.34 15.37 56.00 16.28 36.94 35.63 84.41 72.39 10.49 15.21 75.55 63.36 35.58 29.90 81.62 32.33 27.49 39.89 37.33 60.01 56 E6_Da NovelBoundary 0 6.52 6.25 21.11 43.78 3.82 29.24 11.84 14.91 8.16 61.27 38.11 0.00 0.00 49.39 28.18 7.86 22.07 35.53 12.52 10.35 23.04 11.88 22.11 57 E6a_E7b KnownJunction 0 18.23 2.30 11.00 41.62 12.56 86.43 16.65 25.42 41.32 71.24 65.38 6.00 0.00 51.03 67.00 16.32 30.01 65.83 16.28 26.53 33.67 51.50 78.96 58 E7_Aa NovelBoundary 0 30.30 9.74 32.52 32.33 18.76 37.59 16.16 20.29 13.25 50.50 40.54 0.00 15.10 57.45 35.85 16.75 21.60 59.40 0.00 26.33 16.80 15.98 30.82 59 ER7a ExonRegion 0 12.70 3.72 25.05 49.64 13.73 34.03 10.56 22.74 13.35 50.14 34.43 6.18 7.89 49.01 40.97 21.87 22.19 38.95 14.18 16.13 22.66 27.40 29.53 60 E7_Ab KnownBoundary 0 6.67 21.31 43.35 56.44 20.37 39.41 3.93 32.57 15.13 40.24 33.80 6.15 20.13 24.25 37.58 8.46 21.41 51.40 0.00 14.38 27.99 21.68 11.78 61 ER7b ExonRegion 0 21.65 10.47 36.00 81.48 25.66 78.23 20.02 52.99 36.04 99.59 73.96 9.45 10.61 87.50 86.81 36.58 25.09 77.67 29.25 21.25 41.37 41.32 85.46 62 E7_Da NovelBoundary 0 0.00 0.00 4.41 5.19 12.99 5.28 6.76 9.73 3.47 24.71 4.63 0.00 6.82 9.30 13.60 4.19 21.97 11.07 0.00 0.00 4.94 16.53 7.85 63 E7a_E8a KnownJunction 0 45.19 6.58 40.27 135.78 6.79 126.18 20.54 53.68 40.10 117.06 68.44 11.25 7.79 56.68 93.45 28.62 29.64 70.76 34.54 14.06 39.41 40.90 87.92 64 E8_Aa NovelBoundary 0 6.74 0.00 5.35 9.36 3.90 10.51 10.25 13.14 12.96 17.49 7.37 0.00 0.00 7.36 4.45 4.36 3.65 16.79 13.93 0.00 8.03 5.39 6.91 65 ER8a ExonRegion 0 40.14 6.07 39.61 87.32 16.10 133.27 19.20 52.30 32.13 88.96 83.35 12.47 9.14 66.25 95.19 27.98 41.26 78.34 42.07 29.49 49.09 48.32 63.04 66 E8_Da NovelBoundary 0 3.11 0.00 14.99 24.04 11.04 52.41 14.93 20.58 11.11 15.55 16.53 0.00 0.00 6.95 5.19 7.18 7.57 31.92 17.32 8.63 8.65 18.92 8.02 67 E8b_E9a KnownJunction 0 24.89 3.35 14.52 38.09 8.23 32.88 6.18 20.78 19.30 46.36 35.43 0.00 0.00 43.20 50.44 15.30 24.68 42.28 4.24 27.80 5.93 45.13 35.85 68 E8_Dc NovelBoundary 0 3.78 0.00 11.80 11.59 7.89 17.49 15.55 1.73 1.79 4.67 2.68 0.00 0.00 17.48 4.45 0.00 4.39 17.33 9.51 0.00 3.15 12.25 21.34 69 E8c_E9a KnownJunction 0 6.45 5.92 13.72 36.83 3.99 46.56 4.15 29.04 16.32 28.77 40.01 12.60 12.82 28.96 28.56 27.77 8.79 39.34 3.67 10.87 23.60 27.86 28.08 70 ER8b ExonRegion 1 33.86 4.07 37.99 61.33 16.05 94.75 15.00 46.09 32.94 74.17 70.23 4.33 9.38 77.42 66.73 29.72 29.71 76.37 24.42 36.88 37.46 60.42 55.80 71 ER8c ExonRegion 0 7.81 4.07 16.59 33.86 8.03 58.68 9.37 24.20 14.35 26.56 40.89 8.33 9.38 30.61 31.02 25.15 9.90 43.49 14.21 11.13 24.41 27.09 30.04 72 I8 Intron 0 9.64 1.85 5.55 3.08 4.06 6.12 3.62 1.56 1.12 6.74 4.69 3.48 3.52 10.67 16.27 2.71 8.02 5.30 2.90 1.94 6.02 1.90 6.24 73 I8_SR1 SilentIntronRegion 0 9.75 1.87 5.62 3.11 4.11 6.20 3.65 1.58 1.13 6.81 4.75 3.52 3.56 10.80 16.46 2.74 8.11 5.37 2.94 1.96 6.09 1.92 6.32 74 E9_Aa NovelBoundary 0 7.19 6.05 0.00 0.00 4.24 8.40 2.03 3.94 3.41 4.22 6.58 0.00 0.00 7.30 14.83 3.93 18.14 0.00 0.00 0.00 8.83 3.06 3.93 75 ER9a ExonRegion 0 31.64 13.14 43.23 90.89 15.36 84.25 19.07 51.59 36.29 87.29 70.84 10.63 10.26 71.12 89.46 36.32 37.29 77.55 20.56 39.09 46.17 59.74 68.33 76 E9a_E10a KnownJunction 1 38.60 18.29 63.27 148.37 47.71 99.03 56.00 65.80 68.17 134.07 79.44 0.00 0.00 80.46 68.85 40.25 30.95 128.22 33.98 70.82 56.59 93.50 102.27 77 ER10a ExonRegion 0 27.63 11.38 44.80 100.67 34.39 73.24 18.65 42.13 39.34 86.31 56.86 10.66 9.26 67.19 89.72 35.28 32.67 62.99 30.20 28.40 40.92 50.53 62.97