Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 VWA1 Gene 0 11.02 3.52 167.95 49.94 13.90 9.68 8.12 43.73 53.71 28.12 0.00 0.87 2.07 20.21 9.89 0.42 10.10 0.55 3.95 0.90 13.02 34.26 25.52 2 495558 Transcript 0 0.00 0.00 1.14 1.27 0.24 0.00 0.00 0.46 1.23 0.00 0.00 0.00 0.00 0.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.74 0.79 3 338660 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.41 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 404702 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 476993 Transcript 0 2.78 1.08 40.82 15.43 5.60 3.13 4.17 14.15 9.70 8.09 0.00 0.60 0.67 1.70 0.66 0.08 0.79 0.00 0.54 0.31 0.56 4.98 5.88 6 339380 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 471398 Transcript 0 0.45 0.09 3.67 2.38 0.56 0.11 0.00 3.05 3.30 1.28 0.00 0.00 0.02 1.52 0.11 0.00 0.71 0.00 0.01 0.00 0.06 0.04 0.62 8 ER1a ExonRegion 0 0.00 0.00 2.28 2.54 0.48 0.00 0.00 0.92 0.66 0.00 0.00 0.00 0.00 0.48 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.49 1.57 9 E1a_E3b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.41 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 ER2b ExonRegion 0 0.00 0.00 0.00 0.00 0.04 0.00 0.00 0.00 0.00 0.05 0.00 0.00 0.00 0.16 0.72 0.00 0.23 0.00 1.28 0.00 0.00 0.00 0.37 12 E2_Ac KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.56 0.00 0.00 0.00 0.00 2.47 0.00 0.00 3.74 0.00 0.00 0.00 0.00 0.00 3.84 13 ER2c ExonRegion 0 7.01 0.77 13.75 2.79 8.03 3.87 2.94 4.38 3.29 2.47 0.00 0.00 0.00 3.39 1.22 0.00 7.56 0.00 3.19 1.18 8.96 12.45 20.75 14 E2_Ad KnownBoundary 0 14.45 0.00 5.38 0.00 12.82 5.62 3.84 2.09 1.36 3.09 0.00 0.00 0.00 0.00 4.45 0.00 0.00 0.00 0.00 3.26 20.63 11.88 16.90 15 E2_Ae KnownBoundary 0 27.93 12.63 115.58 31.73 47.20 24.42 39.75 35.90 34.35 20.63 0.00 0.00 0.00 64.98 14.09 3.85 27.21 1.87 4.24 0.00 11.37 110.40 91.25 16 ER2d ExonRegion 0 24.17 7.39 66.62 13.84 30.84 19.59 23.20 13.65 15.99 12.19 0.00 0.00 0.00 42.23 11.30 2.35 25.19 1.46 2.51 2.13 21.46 79.28 70.02 17 ER2e ExonRegion 0 11.07 2.79 48.06 11.05 12.73 13.24 11.39 9.95 13.54 7.48 0.00 0.00 1.31 15.16 3.14 1.24 8.02 0.77 1.74 0.17 5.87 34.64 25.30 18 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19 E2a_E3b KnownJunction 0 0.00 0.00 37.23 4.46 0.00 0.00 0.00 11.75 10.07 2.28 0.00 0.00 5.68 2.47 0.00 0.00 3.65 0.00 3.95 0.00 5.31 9.00 0.00 20 E2a_E3c KnownJunction 0 0.00 0.00 1.63 0.00 0.00 0.00 0.00 0.00 1.79 0.00 0.00 0.00 0.00 2.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21 ER3a ExonRegion 0 0.89 0.18 7.33 4.75 1.13 0.23 0.00 6.10 6.59 2.56 0.00 0.00 0.04 3.05 0.22 0.00 1.42 0.00 0.03 0.00 0.13 0.09 1.24 22 E3_Ab KnownBoundary 0 0.00 2.70 12.21 6.06 0.00 2.56 0.00 8.91 4.54 1.67 0.00 0.00 0.00 0.00 4.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23 ER3b ExonRegion 0 5.11 6.08 249.08 76.41 13.91 10.69 8.05 46.16 91.61 38.21 0.00 2.08 1.67 30.99 12.06 1.64 22.12 0.59 6.66 2.17 27.84 58.18 39.52 24 E3_Da KnownBoundary 0 3.11 17.37 463.53 152.89 61.63 48.10 32.15 76.07 170.05 51.79 0.00 5.55 0.00 33.32 5.19 3.93 36.19 0.00 4.80 0.00 24.77 80.40 52.41 25 ER3c ExonRegion 0 10.26 8.92 480.02 152.86 24.45 29.28 18.78 122.55 172.46 74.02 0.00 3.94 2.72 58.21 22.73 1.58 30.80 0.92 12.13 2.33 35.40 108.03 63.63 26 E3_Ac KnownBoundary 0 23.12 8.35 576.59 197.28 29.54 12.66 13.29 129.88 227.34 82.47 0.00 0.00 0.00 49.50 26.70 3.50 17.48 0.00 14.21 0.00 32.12 106.85 65.81 27 ER3d ExonRegion 0 14.97 6.41 604.20 192.27 26.46 27.20 13.68 140.79 199.73 100.48 0.00 1.33 7.22 58.36 30.88 1.97 39.80 0.00 9.93 3.99 50.03 115.95 74.49 28 E3_Db NovelBoundary 0 23.12 15.52 551.87 184.09 30.31 51.96 23.10 136.04 183.27 71.67 0.00 0.00 13.31 49.50 37.83 0.00 37.31 0.00 4.33 0.00 54.43 91.12 73.50 29 E3c_E4a KnownJunction 0 5.63 8.29 676.17 197.14 34.38 50.65 32.24 177.07 191.43 92.00 0.00 0.00 0.00 50.74 22.25 3.50 32.07 0.00 13.84 3.13 45.84 107.71 65.56 30 ER3e ExonRegion 0 8.80 10.49 606.85 188.73 26.76 43.86 27.01 159.57 192.92 88.40 0.00 0.00 7.32 54.83 26.81 1.19 36.31 0.00 12.10 2.13 50.95 96.93 71.65 31 ER4a ExonRegion 0 25.55 6.62 312.67 86.24 26.67 17.16 13.92 81.08 100.18 52.06 0.00 1.09 4.14 41.78 21.84 0.51 18.66 1.42 7.85 1.38 25.66 64.67 47.84 32 E4_Da KnownBoundary 0 0.00 0.00 47.75 19.81 15.11 2.90 3.84 11.50 17.25 10.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.90 6.12 8.19 33 ER4b ExonRegion 0 2.78 1.08 40.82 15.43 5.60 3.13 4.17 14.15 9.70 8.09 0.00 0.60 0.67 1.70 0.66 0.08 0.79 0.00 0.54 0.31 0.56 4.98 5.88