Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	APITD1	Gene	0	14.91	15.62	19.94	16.28	35.73	31.34	52.90	28.04	18.45	28.99	37.32	28.40	18.57	44.06	38.96	31.52	26.11	13.86	14.14	11.62	16.10	16.33	12.31
2	340156	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
3	320498	Transcript	1	3.25	8.12	20.41	34.49	37.20	17.61	34.92	47.41	21.60	43.45	2.29	16.83	13.69	5.21	13.93	7.01	5.10	4.31	12.16	7.98	3.38	6.55	8.60
4	336114	Transcript	0	0.00	0.00	1.51	0.00	0.00	0.00	1.68	0.00	1.79	0.00	2.53	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.80	0.00	0.00	0.00	0.00
5	309048	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
6	400900	Transcript	0	3.61	4.81	2.21	1.66	7.57	20.22	11.82	1.77	1.14	2.43	2.50	0.63	1.83	5.94	7.50	9.86	9.34	2.57	2.64	1.66	5.43	2.85	9.02
7	477755	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
8	462462	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
9	465026	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
10	470413	Transcript	0	0.00	0.00	1.83	2.06	15.20	10.51	16.03	8.71	5.70	7.74	4.95	12.00	0.00	2.30	9.39	0.00	4.30	4.85	0.00	2.62	5.87	5.76	0.00
11	464507	Transcript	0	5.15	3.94	5.87	7.34	7.48	3.63	14.79	7.62	7.83	10.57	1.97	2.04	1.19	3.20	4.20	7.24	4.12	4.52	2.52	2.52	3.78	1.81	2.31
12	IG33_AR1	ActiveIntergenicRegion	0	95.95	46.08	16.94	24.39	207.44	54.00	132.92	21.33	12.04	13.75	74.89	55.80	50.13	76.08	152.84	49.27	58.04	5.63	47.62	26.86	26.46	59.98	44.60
13	ER1a	ExonRegion	0	0.00	0.00	0.33	0.00	0.00	0.00	2.15	0.93	0.00	1.23	0.70	0.64	0.70	3.89	2.21	2.92	0.59	0.86	0.00	0.77	0.00	0.38	0.53
14	E1_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	6.66	0.00	0.00	4.36	0.00	0.00	0.00	0.00	0.00	0.00	0.00
15	ER1b	ExonRegion	0	1.08	2.00	0.02	0.05	1.45	1.43	6.49	0.00	0.00	1.22	0.07	1.54	0.72	5.53	4.97	2.77	2.63	3.70	0.16	0.50	0.00	0.00	0.00
16	E1_Ac	KnownBoundary	0	3.70	6.38	0.00	0.00	4.16	7.50	9.45	0.00	0.00	1.32	0.00	6.30	0.00	2.47	9.64	4.36	3.74	3.69	0.00	2.68	0.00	0.00	0.00
17	ER1c	ExonRegion	0	18.32	7.99	12.48	4.16	22.45	68.04	118.28	6.49	4.67	12.51	34.76	2.18	3.08	39.73	31.17	27.30	23.21	15.42	16.82	15.93	2.70	5.12	1.20
18	E1a_E3a	KnownJunction	0	0.00	2.83	12.92	0.00	3.57	17.49	6.45	9.98	3.47	9.51	25.69	0.00	6.33	14.13	4.45	7.26	12.72	2.11	0.00	12.46	0.00	0.00	0.00
19	ER2a	ExonRegion	0	3.61	4.81	2.21	1.66	7.57	20.22	11.82	1.77	1.14	2.43	2.50	0.63	1.83	5.94	7.50	9.86	9.34	2.57	2.64	1.66	5.43	2.85	9.02
20	E2_Ab	KnownBoundary	0	17.34	13.42	4.23	3.66	31.58	81.09	31.36	5.34	1.48	5.94	5.37	0.00	6.33	14.89	30.29	32.21	17.95	4.85	4.80	2.88	12.17	6.18	23.65
21	ER2b	ExonRegion	0	6.06	5.39	9.76	3.15	23.92	48.19	28.39	12.15	13.87	14.03	24.04	4.75	7.31	32.60	34.48	37.54	37.64	15.93	13.58	11.48	22.46	12.25	19.52
22	E2_Ac	KnownBoundary	0	18.67	19.47	12.77	0.00	32.43	84.50	130.50	16.92	28.99	19.56	53.01	31.06	36.36	51.27	27.81	26.49	45.91	25.12	4.80	15.34	20.20	8.14	14.85
23	ER2c	ExonRegion	0	24.82	19.79	10.11	4.22	18.06	25.61	49.24	26.81	23.28	23.82	49.75	20.85	20.78	55.56	41.78	50.00	50.25	19.89	13.76	8.59	40.96	24.23	16.82
24	E2_Ad	KnownBoundary	0	45.93	15.26	16.50	10.12	24.53	21.46	57.41	38.08	31.08	26.75	57.75	23.26	13.64	76.17	88.88	48.02	75.74	33.04	41.04	11.12	53.56	17.15	32.86
25	ER2d	ExonRegion	0	15.19	13.55	18.04	10.66	39.31	36.87	64.10	32.85	29.31	30.06	47.69	44.20	36.34	59.94	56.48	57.84	44.99	25.86	25.91	12.45	59.04	32.17	27.83
26	E2_Da	NovelBoundary	0	3.33	3.35	2.60	9.49	8.66	5.28	10.02	7.76	4.31	3.76	11.74	6.30	0.00	4.65	4.45	14.95	0.00	7.42	3.67	2.68	3.15	3.06	3.41
27	E2a_E3a	KnownJunction	0	11.78	9.34	19.66	9.02	84.04	54.06	48.58	32.74	29.77	18.78	54.28	18.91	40.74	95.00	77.51	52.81	43.95	27.32	22.02	5.69	94.33	33.07	19.04
28	E2a_E4a	NovelJunction	0	0.00	0.00	5.32	0.00	0.00	2.90	4.46	0.00	3.44	0.00	0.00	0.00	0.00	10.01	0.00	0.00	8.60	0.00	4.80	3.26	0.00	3.12	0.00
29	E2a_E5b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	7.82	0.00	1.27	0.00	0.00	0.00	0.00	5.36	0.00	8.12	4.11	0.00	0.00	0.00	2.78	2.63	3.93
30	E3_Aa	NovelBoundary	0	0.00	0.00	4.94	5.03	8.32	2.67	36.70	13.88	4.98	8.97	7.42	0.00	0.00	4.83	0.00	8.72	0.00	7.05	0.00	5.37	0.00	3.06	0.00
31	ER3a	ExonRegion	0	31.82	24.19	49.42	25.44	60.85	55.50	84.29	49.09	43.05	47.21	133.39	73.88	65.74	139.98	121.95	69.03	77.07	51.71	32.06	45.06	52.87	32.65	30.08
32	E3a_E4a	KnownJunction	0	42.38	17.63	66.23	40.12	76.74	45.14	104.53	50.73	44.13	51.25	144.83	134.89	68.99	140.21	148.46	119.97	84.43	59.44	63.81	43.27	58.87	35.21	31.50
33	E4_Aa	NovelBoundary	0	6.89	0.00	1.30	9.22	18.51	0.00	10.91	11.58	3.30	3.33	2.42	17.26	6.66	0.00	0.00	3.67	0.00	6.09	4.61	0.00	5.99	3.00	3.50
34	ER4a	ExonRegion	0	35.60	23.66	61.60	32.34	112.87	62.02	136.13	66.47	53.45	53.38	158.15	121.23	66.94	149.71	127.92	162.66	90.32	58.12	83.40	36.17	63.51	37.88	41.11
35	E4a_E5b	KnownJunction	0	36.15	38.02	31.02	16.75	178.95	98.24	231.68	69.05	47.74	51.68	149.09	95.58	43.18	136.80	124.98	155.86	90.51	24.83	74.26	24.61	54.86	42.80	52.50
36	E4a_E7a	KnownJunction	0	0.00	0.00	1.51	0.00	0.00	0.00	1.68	0.00	1.79	0.00	2.53	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.80	0.00	0.00	0.00	0.00
37	ER4b	ExonRegion	0	36.90	26.79	53.28	33.42	136.23	73.83	170.27	72.75	62.19	60.74	167.66	100.90	67.70	139.04	116.05	154.81	96.16	50.69	83.23	28.68	65.73	41.40	52.99
38	ER5a	ExonRegion	0	5.15	3.94	5.87	7.34	7.48	3.63	14.79	7.62	7.83	10.57	1.97	2.04	1.19	3.20	4.20	7.24	4.12	4.52	2.52	2.52	3.78	1.81	2.31
39	E5_Ab	KnownBoundary	0	10.45	2.89	7.75	7.52	34.89	5.68	11.57	11.05	7.47	12.14	0.00	0.00	0.00	2.65	0.00	3.85	0.00	4.06	0.00	0.00	0.00	3.12	0.00
40	ER5b	ExonRegion	0	25.56	32.32	54.71	23.77	141.86	92.77	214.82	74.53	66.40	73.98	153.90	100.04	66.30	155.00	130.86	100.92	78.22	43.65	40.83	37.33	50.02	39.97	39.11
41	E5_Da	NovelBoundary	0	0.00	9.27	8.81	7.13	20.46	0.00	18.68	4.44	4.66	9.21	0.00	12.30	0.00	2.12	0.00	0.00	0.00	2.11	0.00	8.37	6.30	0.00	0.00
42	E5a_E6a	KnownJunction	1	37.04	61.24	53.13	34.73	129.88	68.60	243.73	65.51	58.51	78.44	147.93	132.94	34.58	178.88	152.17	99.63	64.98	46.80	43.67	49.15	47.26	43.23	35.60
43	E5a_E7a	KnownJunction	0	0.00	0.00	10.14	1.70	0.00	10.22	4.50	9.94	1.79	3.06	4.58	0.00	0.00	0.00	5.56	0.00	0.00	4.15	3.76	0.00	0.00	0.00	0.00
44	E6_Aa	NovelBoundary	0	17.04	16.25	12.36	5.59	8.23	0.00	12.01	11.58	8.94	18.96	2.68	5.85	6.49	2.24	0.00	0.00	0.00	2.57	0.00	3.26	0.00	2.69	0.00
45	ER6a	ExonRegion	0	46.78	51.16	48.61	40.13	93.42	87.94	152.52	66.40	45.29	77.37	156.48	150.79	75.71	233.39	164.87	95.45	89.69	47.12	53.51	37.48	36.96	54.29	27.98
46	E6_Da	KnownBoundary	0	54.31	54.53	55.73	37.89	113.58	87.45	142.60	78.74	45.25	82.63	124.35	176.01	107.14	248.81	230.05	111.42	87.52	45.27	58.07	40.84	35.15	71.83	30.13
47	ER6b	ExonRegion	0	41.28	42.19	60.87	35.87	86.32	57.22	112.82	76.99	40.40	91.23	137.58	111.39	52.16	140.13	127.55	87.89	75.24	26.02	35.40	26.98	31.94	45.56	39.14
48	E6_Db	KnownBoundary	0	45.56	55.65	74.95	31.63	80.81	21.92	100.38	80.46	36.37	75.54	124.35	69.32	55.19	105.36	130.66	77.67	50.58	19.03	23.06	14.89	28.97	36.92	22.28
49	E6b_E7a	KnownJunction	0	0.00	0.00	1.83	2.06	15.20	10.51	16.03	8.71	5.70	7.74	4.95	12.00	0.00	2.30	9.39	0.00	4.30	4.85	0.00	2.62	5.87	5.76	0.00
50	ER6c	ExonRegion	0	47.05	53.71	50.50	40.60	106.11	64.42	133.85	74.64	33.37	64.26	139.17	94.04	46.67	173.25	103.21	89.70	53.79	27.66	20.73	26.37	28.72	63.39	17.48
51	E6_Dc	KnownBoundary	0	101.50	68.08	43.29	56.84	95.59	72.46	176.65	78.29	35.73	59.53	120.40	107.44	72.40	210.73	137.34	114.24	63.49	27.19	39.34	29.02	27.43	69.50	24.24
52	ER6d	ExonRegion	0	35.58	66.08	53.13	47.50	82.72	32.64	100.85	68.22	33.71	70.70	71.32	69.30	29.47	75.83	72.34	63.93	38.21	13.76	21.13	20.69	12.04	47.96	18.40
53	E6_Dd	KnownBoundary	1	43.79	44.07	47.43	39.46	58.49	15.50	56.79	54.83	46.50	49.75	38.33	31.36	66.07	35.67	10.51	32.47	47.78	0.00	14.02	21.60	2.84	54.13	12.46
54	ER6e	ExonRegion	1	38.22	42.16	56.48	60.91	79.55	16.65	40.48	69.60	33.82	64.78	28.58	47.62	34.99	47.79	49.82	27.55	22.41	2.24	6.31	17.80	1.65	34.82	9.37
55	E6_De	KnownBoundary	1	27.93	22.50	55.47	54.67	54.50	21.18	35.33	64.86	11.78	58.02	22.90	67.37	20.45	40.08	62.43	28.80	4.68	3.98	0.00	17.58	3.03	11.63	3.93
56	ER6f	ExonRegion	1	19.63	23.45	19.01	24.14	39.04	11.90	37.37	19.84	9.25	22.00	11.87	28.45	30.92	13.32	24.19	9.74	8.02	2.62	1.66	3.99	0.61	11.44	3.48
57	E6_Df	NovelBoundary	0	0.00	42.03	20.16	21.01	28.10	18.00	53.61	50.52	19.01	33.07	0.00	0.00	0.00	12.18	4.70	4.19	0.00	2.57	3.86	5.75	0.00	8.70	7.09
58	I6	Intron	0	4.52	6.12	11.90	17.74	14.12	11.56	19.60	18.96	11.75	19.53	1.89	2.60	2.27	2.32	7.53	4.71	2.35	11.90	7.40	4.15	2.38	1.98	2.79
59	I6_SR1	SilentIntronRegion	0	12.76	20.12	5.94	11.85	3.16	2.58	5.62	10.27	0.00	6.81	1.29	2.16	2.98	6.50	8.84	4.32	2.55	0.00	0.00	2.93	0.00	0.00	0.00
60	I6_SR2	SilentIntronRegion	0	4.22	5.60	12.18	18.04	14.60	11.97	20.22	19.37	12.26	20.10	1.92	2.62	2.26	2.17	7.49	4.75	2.36	12.41	7.72	4.22	2.49	2.06	2.91
61	Ix	Intron	0	10.89	16.86	22.44	22.62	28.47	26.02	35.51	43.62	19.03	45.25	3.09	5.84	6.52	5.53	9.74	5.34	5.77	10.14	8.75	7.33	4.29	6.25	7.33
62	Ix_AR1	ActiveIntronRegion	0	4.81	11.01	17.43	9.19	6.51	17.84	16.51	21.98	10.65	19.34	3.11	2.28	3.42	4.08	9.58	6.15	2.91	9.16	5.51	4.40	6.01	1.53	3.17
63	Ix_AR2	ActiveIntronRegion	0	7.76	19.08	22.48	20.39	15.47	20.08	28.80	45.49	18.75	46.98	0.02	7.38	3.19	3.19	6.96	2.10	4.74	11.47	6.62	2.67	10.79	5.53	12.91
64	Ix_SR1	SilentIntronRegion	0	15.87	22.42	31.63	30.24	40.41	33.56	45.58	59.29	25.11	61.92	3.59	8.13	5.38	7.76	11.47	6.55	6.73	12.85	9.32	10.38	4.79	7.89	9.19
65	Ix_AR3	ActiveIntronRegion	0	9.80	13.62	14.74	23.21	32.33	24.02	38.15	39.13	17.50	42.50	3.23	5.12	10.91	4.38	8.46	4.14	6.84	7.25	10.87	6.81	0.93	7.69	6.63
66	ER7a	ExonRegion	0	9.51	3.30	2.26	4.77	7.15	25.30	25.20	10.18	5.15	6.70	1.72	1.13	0.00	3.25	4.58	0.64	1.01	4.36	4.23	1.23	0.69	1.64	0.01
67	E7_Da	KnownBoundary	0	0.00	0.00	1.71	5.46	20.29	28.73	20.45	4.35	0.00	3.71	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.84
68	ER7b	ExonRegion	0	5.85	6.49	17.10	19.28	29.30	20.39	39.46	22.52	13.83	28.46	0.48	10.63	5.54	4.09	5.91	3.53	1.16	4.56	7.81	4.22	3.05	4.25	3.39
69	E7_Db	KnownBoundary	1	0.00	13.02	30.31	33.56	76.32	19.59	30.25	38.65	31.42	58.42	5.11	45.16	12.66	0.00	15.08	0.00	0.00	0.00	27.29	2.88	0.00	7.78	4.18
70	ER7c	ExonRegion	1	3.25	8.12	20.41	34.49	37.20	17.61	34.92	47.41	21.60	43.45	2.29	16.83	13.69	5.21	13.93	7.01	5.10	4.31	12.16	7.98	3.38	6.55	8.60
71	IG34	Intergenic	0	9.92	12.94	13.34	17.88	36.83	24.16	30.21	23.34	11.44	22.74	2.61	7.27	4.68	4.23	11.24	6.58	6.44	11.46	20.90	4.23	4.13	3.36	6.50
72	IG34_SR1	SilentIntergenicRegion	0	9.93	12.96	13.36	17.91	36.89	24.20	30.25	23.38	11.46	22.77	2.62	7.28	4.69	4.24	11.25	6.59	6.45	11.48	20.93	4.23	4.13	3.36	6.51