Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 LRRC47 Gene 0 81.05 63.34 86.83 85.50 115.76 131.94 45.97 178.73 165.34 296.37 159.26 83.71 76.91 217.45 208.99 169.57 145.89 74.60 63.75 68.63 130.61 113.59 101.54 2 378251 Transcript 0 51.85 51.27 76.57 71.18 81.60 114.64 37.18 135.07 145.02 264.31 148.78 55.25 50.49 212.50 189.85 166.10 134.96 102.59 66.66 70.18 130.99 85.01 94.81 3 462356 Transcript 0 12.70 1.28 6.52 4.82 12.56 21.19 4.62 12.92 6.73 19.90 9.34 6.19 0.43 17.62 15.44 15.64 15.79 10.94 1.32 6.61 13.32 11.70 12.83 4 479239 Transcript 0 5.68 0.50 0.66 3.44 4.26 5.16 1.27 8.92 3.01 4.99 12.08 5.62 1.02 11.68 9.29 13.00 6.58 0.75 1.15 2.59 4.12 3.67 3.37 5 ER1a ExonRegion 1 2.37 7.20 27.14 15.20 10.22 29.09 6.05 46.67 54.90 132.90 77.39 12.07 20.92 104.42 76.57 61.95 79.07 37.13 18.93 23.63 73.70 23.24 35.75 6 E1a_E2a KnownJunction 0 8.74 31.90 76.25 52.77 49.75 86.09 23.58 104.37 120.89 319.85 186.84 93.78 61.36 175.35 141.54 162.52 142.40 104.26 62.50 49.28 129.55 60.38 102.18 7 ER2a ExonRegion 0 15.90 29.19 66.74 50.66 41.09 85.55 22.44 110.33 139.67 269.45 152.75 45.67 47.15 218.93 165.72 164.85 147.74 101.38 59.21 59.33 151.66 74.88 90.09 8 E2a_E3a KnownJunction 0 48.53 88.14 79.86 74.55 76.99 128.62 30.47 142.20 147.80 239.61 122.24 31.96 20.62 244.75 196.68 242.59 142.03 175.06 101.18 79.45 119.72 93.81 98.51 9 I2 Intron 0 15.69 6.53 7.48 16.11 30.79 25.57 8.17 23.76 20.70 37.74 21.74 14.76 9.22 32.07 22.74 29.42 22.76 7.62 6.93 8.16 14.72 18.14 18.26 10 I2_SR1 SilentIntronRegion 0 15.72 6.55 7.49 16.14 30.85 25.62 8.18 23.81 20.74 37.82 21.79 14.79 9.24 32.14 22.79 29.48 22.80 7.63 6.95 8.18 14.75 18.18 18.30 11 E3_Aa NovelBoundary 0 38.97 12.50 6.53 22.94 83.53 49.23 16.56 41.65 23.26 63.64 30.96 18.61 6.82 55.09 27.57 48.71 29.73 17.16 8.75 2.56 24.96 27.92 28.85 12 ER3a ExonRegion 1 56.11 43.23 71.91 78.17 82.33 141.66 44.11 134.01 159.06 233.72 150.35 31.34 41.37 233.98 198.72 183.36 149.27 112.13 77.05 79.65 142.26 93.78 111.64 13 E3a_E4b KnownJunction 0 59.57 44.86 89.26 91.30 96.43 138.33 54.32 137.84 160.44 263.25 162.15 42.76 41.56 248.57 230.42 126.98 124.36 108.40 60.90 104.06 152.59 72.62 82.29 14 I3 Intron 0 9.78 8.06 6.18 10.92 17.67 24.08 7.55 22.57 16.13 24.70 13.41 5.07 6.81 20.69 20.53 38.80 25.90 9.20 5.26 6.85 18.18 14.80 16.98 15 I3_SR1 SilentIntronRegion 0 9.81 8.08 6.20 10.95 17.72 24.16 7.57 22.64 16.18 24.78 13.46 5.08 6.83 20.75 20.59 38.93 25.98 9.23 5.27 6.87 18.24 14.85 17.03 16 E4_Aa NovelBoundary 0 45.71 5.79 4.11 6.16 39.47 22.03 2.25 32.41 23.00 21.27 7.53 0.00 0.00 35.49 28.06 85.53 51.61 9.45 4.80 12.27 28.60 16.23 32.86 17 ER4a ExonRegion 0 12.70 1.28 6.52 4.82 12.56 21.19 4.62 12.92 6.73 19.90 9.34 6.19 0.43 17.62 15.44 15.64 15.79 10.94 1.32 6.61 13.32 11.70 12.83 18 E4_Ab KnownBoundary 0 47.71 2.96 16.32 10.95 24.96 49.97 5.65 31.96 18.49 36.32 5.05 26.56 0.00 30.90 14.96 37.26 8.23 25.29 8.28 15.28 25.27 21.25 14.68 19 ER4b ExonRegion 0 71.50 71.91 83.08 68.63 79.52 146.22 46.63 103.46 127.33 236.87 141.68 49.45 56.65 252.78 216.60 146.24 166.59 78.33 39.87 70.98 159.63 91.61 87.46 20 E4_Ac KnownBoundary 0 65.20 87.75 109.99 86.07 124.28 150.99 61.17 136.78 185.50 332.93 132.14 51.47 80.51 252.87 188.39 134.58 134.17 74.45 59.11 70.95 156.11 112.12 120.28 21 ER4c ExonRegion 1 58.68 60.33 101.97 103.93 110.18 215.56 64.90 174.54 182.89 330.40 224.60 50.51 53.61 291.48 246.89 211.31 220.38 78.44 94.44 98.12 187.62 174.65 115.74 22 E4a_E5a KnownJunction 0 0.00 0.00 0.00 3.46 0.00 6.64 0.00 2.42 1.53 1.37 0.00 0.00 0.00 4.71 4.45 6.66 0.00 0.00 0.00 0.00 0.00 0.00 4.35 23 E4a_E6a KnownJunction 0 74.09 93.80 139.35 178.83 122.24 286.31 83.73 285.42 248.41 461.11 270.02 83.73 77.92 322.45 302.12 249.42 267.13 91.53 143.44 133.01 216.71 194.17 111.74 24 ER5a ExonRegion 0 10.97 1.49 1.97 5.00 9.55 8.83 3.80 10.83 4.84 6.38 10.88 9.51 3.07 13.20 9.32 11.91 14.97 2.25 3.45 5.20 6.94 7.89 5.75 25 E5a_E6a KnownJunction 0 6.08 0.00 0.00 1.86 3.23 0.00 0.00 13.51 2.66 7.23 25.37 7.35 0.00 17.13 14.09 20.42 4.77 0.00 0.00 2.56 5.44 3.12 0.00 26 ER6a ExonRegion 0 103.61 111.33 151.48 163.52 130.31 198.90 65.86 330.02 315.23 543.80 303.18 126.48 131.37 366.51 294.24 291.21 236.96 92.41 91.94 117.33 174.46 189.82 150.22 27 E6a_E7a KnownJunction 0 163.58 118.99 206.14 229.41 195.50 348.44 84.44 399.98 381.07 671.28 298.65 139.85 151.94 448.23 337.60 293.60 246.56 109.69 88.10 118.69 148.64 257.43 195.40 28 ER7a ExonRegion 0 146.37 138.13 191.74 201.12 256.31 357.06 104.87 467.22 373.55 657.90 394.55 239.28 168.37 398.88 320.75 374.32 331.56 141.72 146.17 141.09 221.06 251.48 208.04 29 E7a_E8a KnownJunction 0 162.03 106.30 150.23 153.83 377.08 385.46 160.35 404.91 300.69 485.99 246.22 228.07 157.94 384.96 314.11 379.81 173.73 132.28 174.88 154.42 143.32 239.48 200.18 30 ER8a ExonRegion 0 148.34 98.43 152.00 172.74 429.03 388.49 134.88 423.77 315.09 547.22 307.21 251.94 172.23 425.38 377.59 363.48 250.80 132.06 161.17 133.18 171.94 267.58 197.63 31 E8_Da KnownBoundary 0 187.00 121.29 207.09 234.04 520.88 375.47 103.69 520.08 375.14 676.12 364.30 212.02 158.92 382.01 367.89 390.75 355.12 133.98 117.93 138.44 213.75 236.06 213.41 32 ER8b ExonRegion 0 115.94 106.27 165.55 153.88 190.27 201.11 61.46 338.48 266.47 485.71 252.51 221.33 165.30 373.84 319.64 265.55 274.04 113.30 101.73 93.44 233.22 199.16 157.78 33 E8_Db KnownBoundary 0 258.71 185.30 152.45 151.76 187.44 332.02 91.90 367.28 235.79 569.93 308.87 182.91 112.82 328.21 304.72 351.45 413.46 140.57 150.97 108.40 352.38 295.57 215.88 34 ER8c ExonRegion 0 171.74 114.35 124.85 135.60 214.39 193.12 79.30 270.06 232.38 391.38 189.76 129.16 120.43 261.51 319.31 220.48 159.84 79.77 86.89 95.85 147.48 176.39 143.22 35 IG11 Intergenic 0 3.01 2.89 3.84 7.40 4.00 13.19 2.50 9.17 6.30 10.16 0.33 0.74 0.75 1.49 2.29 0.66 1.88 3.76 3.39 2.55 6.81 5.18 10.38 36 IG11_AR3 ActiveIntergenicRegion 0 13.16 7.99 12.45 27.56 18.63 52.45 7.67 22.90 15.74 26.97 1.20 0.99 4.69 5.35 6.97 1.23 4.87 14.21 11.89 8.07 19.58 12.09 25.57 37 IG11_SR3 SilentIntergenicRegion 0 6.98 11.58 12.15 21.55 8.76 30.08 7.66 26.54 19.63 23.27 0.55 1.68 1.05 2.64 3.82 1.97 5.13 7.80 8.31 5.96 8.93 10.51 17.61 38 IG11_AR2 ActiveIntergenicRegion 0 5.78 5.91 7.82 16.94 9.32 25.87 5.22 20.63 13.91 24.28 0.97 2.20 0.00 2.56 2.72 0.66 2.02 9.49 3.92 5.24 8.45 6.09 11.75