Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 MAD2L2 Gene 0 28.80 21.12 61.08 19.85 22.94 67.39 85.50 30.73 51.06 68.52 99.36 17.33 14.62 60.15 69.18 57.33 56.59 24.85 25.92 19.39 58.84 59.14 48.94 2 235310 Transcript 0 0.08 0.52 2.28 0.24 0.51 8.24 4.54 0.21 0.90 1.03 0.00 0.00 0.00 0.00 0.09 0.00 0.00 0.40 0.00 0.31 0.96 0.42 0.84 3 376667 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 376655 Transcript 0 4.49 1.18 5.12 2.82 1.42 4.45 7.18 3.06 7.11 3.86 5.65 0.08 1.25 3.79 5.80 5.56 3.11 2.74 3.45 2.27 3.72 2.95 5.85 5 376672 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 376692 Transcript 0 4.23 9.59 5.78 0.97 0.38 23.58 24.97 3.70 3.71 2.62 4.69 0.00 0.00 8.82 14.92 2.12 12.26 3.70 0.00 0.61 19.52 1.19 2.10 7 432625 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 456915 Transcript 0 2.71 1.16 5.93 1.50 0.24 6.46 13.97 4.33 7.18 6.63 9.25 0.00 0.01 4.70 5.93 2.15 3.94 4.20 5.01 4.09 6.15 11.93 6.15 9 376669 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 445656 Transcript 0 1.77 0.27 4.24 0.33 0.82 2.92 2.23 1.20 5.18 4.68 4.08 0.24 0.10 1.46 4.34 2.02 1.85 0.83 1.47 0.37 4.02 3.00 3.42 11 376664 Transcript 0 3.61 2.10 6.83 2.68 3.77 9.57 10.41 4.40 8.27 4.92 6.03 0.53 0.73 4.64 5.18 4.61 3.57 1.95 4.00 2.76 3.12 3.55 2.10 12 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 25.85 0.09 0.00 0.59 0.08 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.01 0.00 0.00 0.00 1.34 1.33 13 E1_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 65.87 4.37 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.99 0.00 0.00 0.00 3.06 0.00 14 E1_Ac KnownBoundary 0 6.30 10.46 0.00 0.00 3.23 65.70 10.25 0.00 4.11 6.80 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.57 4.14 0.00 5.56 8.63 20.06 15 ER1b ExonRegion 0 1.85 3.30 0.00 0.00 1.34 59.94 3.64 0.00 1.24 1.72 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.85 2.79 0.93 4.13 5.99 8.44 16 ER1c ExonRegion 0 5.04 13.90 5.57 0.59 3.92 39.33 38.46 0.00 5.33 8.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.88 2.55 2.92 13.64 7.22 3.77 17 E1_Ad KnownBoundary 0 3.78 24.27 33.38 1.93 26.32 141.11 155.76 0.00 20.57 27.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13.97 8.00 0.00 12.85 7.65 3.41 18 ER1d ExonRegion 0 5.59 16.49 43.69 5.56 29.43 180.83 192.76 0.03 37.15 40.32 0.00 0.00 0.00 0.00 0.14 0.00 0.00 13.54 7.02 12.30 27.03 12.86 7.43 19 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20 E1a_E3g KnownJunction 0 0.00 15.52 65.17 6.89 4.33 41.23 30.30 0.00 37.79 40.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16.33 12.24 14.96 40.46 14.21 20.66 21 ER2a ExonRegion 0 0.39 2.60 9.35 0.74 1.96 8.04 14.81 0.47 2.36 3.75 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.01 0.00 1.56 0.79 0.76 0.54 22 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 4.88 4.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23 ER3a ExonRegion 0 0.00 0.00 2.07 0.46 0.61 2.41 3.74 0.58 1.54 1.34 0.00 0.00 0.00 0.00 0.46 0.00 0.00 0.00 0.00 0.00 4.02 0.00 2.34 24 E3_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 5.68 2.08 0.00 2.95 1.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.01 25 ER3b ExonRegion 0 17.12 3.81 0.74 0.10 4.05 9.26 13.41 0.71 1.49 3.96 5.97 0.00 0.00 3.54 5.39 3.85 4.99 1.45 1.35 0.19 6.02 9.51 10.92 26 E3_Ac KnownBoundary 0 10.30 5.20 1.77 0.00 12.05 5.11 14.18 0.00 1.22 3.84 0.00 0.00 0.00 2.47 0.00 3.33 3.83 0.00 0.00 0.00 0.00 11.02 7.60 27 E3_Ad KnownBoundary 0 22.37 0.00 0.00 0.00 0.00 11.36 17.97 0.00 0.00 0.00 10.74 0.00 0.00 2.94 0.00 8.72 9.35 0.00 9.60 0.00 9.45 6.25 17.07 28 E3_Ae KnownBoundary 0 7.41 0.00 1.71 0.00 0.00 2.67 11.04 2.55 0.00 1.67 2.68 0.00 0.00 3.00 6.18 0.00 0.00 0.00 4.80 0.00 6.18 3.06 0.00 29 E3_Af KnownBoundary 0 245.15 17.63 21.52 15.42 24.62 159.17 156.03 10.02 14.67 29.58 92.34 0.00 6.98 44.74 73.18 95.53 121.08 8.75 45.65 8.50 28.66 30.19 107.47 30 ER3c ExonRegion 0 107.52 15.46 2.94 2.73 21.41 57.21 80.50 3.46 3.71 10.78 47.55 0.00 0.00 42.23 74.27 31.50 56.78 3.70 9.56 5.53 33.94 28.75 41.11 31 ER3d ExonRegion 0 153.37 13.61 4.71 2.94 21.20 94.37 103.47 4.92 4.66 11.82 72.41 0.00 3.25 64.71 120.96 52.81 78.46 2.13 22.79 8.51 41.70 32.86 67.54 32 ER3e ExonRegion 0 187.77 17.43 6.13 4.09 17.58 117.89 130.13 6.91 8.29 13.27 93.33 0.00 4.69 95.36 159.15 78.55 114.59 1.85 31.85 11.25 49.43 46.43 88.10 33 ER3f ExonRegion 0 135.28 20.39 12.65 4.85 16.65 94.90 115.42 10.44 10.02 20.45 89.37 6.13 2.80 64.65 103.84 78.64 102.24 3.16 23.89 15.28 45.60 36.29 67.38 34 E3_Da KnownBoundary 0 0.00 3.03 1.42 0.00 3.48 2.90 1.90 0.00 0.00 1.64 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 35 E3a_E3g KnownJunction 1 44.90 11.64 19.51 5.33 0.00 49.69 37.49 13.31 3.12 20.68 54.86 0.00 6.33 11.95 52.04 23.93 12.72 7.88 9.60 8.18 14.02 8.57 22.88 36 ER3g ExonRegion 0 2.71 1.16 5.93 1.50 0.24 6.46 13.97 4.33 7.18 6.63 9.25 0.00 0.01 4.70 5.93 2.15 3.94 4.20 5.01 4.09 6.15 11.93 6.15 37 E3_Ag KnownBoundary 0 17.63 2.76 7.18 1.27 6.88 40.43 76.93 9.36 13.66 11.42 7.53 0.00 0.00 16.25 5.07 10.85 9.35 14.63 0.00 6.01 13.65 24.55 19.21 38 ER3h ExonRegion 0 47.77 22.81 69.15 18.28 20.25 78.03 96.91 21.62 59.46 92.58 135.30 22.24 12.60 51.40 57.29 36.60 54.30 28.77 29.11 27.70 93.29 77.50 47.16 39 E3_Db KnownBoundary 0 2.96 0.00 1.57 1.86 3.99 0.00 6.09 6.28 4.75 4.46 0.00 0.00 0.00 0.00 6.18 0.00 3.83 0.00 4.42 0.00 0.00 5.94 8.62 40 E3b_E3h KnownJunction 1 29.56 28.61 68.06 33.86 16.21 79.84 84.79 27.31 63.63 111.67 231.01 18.16 6.82 75.40 69.72 24.44 125.39 25.45 31.72 28.70 164.76 104.40 54.97 41 ER3i ExonRegion 0 1.77 0.27 4.24 0.33 0.82 2.92 2.23 1.20 5.18 4.68 4.08 0.24 0.10 1.46 4.34 2.02 1.85 0.83 1.47 0.37 4.02 3.00 3.42 42 E3_Ah KnownBoundary 0 2.96 0.00 4.94 1.40 0.00 0.00 6.14 0.00 2.92 3.44 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.32 0.00 0.00 4.76 5.51 3.41 43 ER3j ExonRegion 0 43.69 32.83 175.26 60.49 49.77 162.31 125.87 84.72 141.76 197.95 405.73 33.35 29.61 188.33 225.31 186.21 212.24 72.25 102.26 74.00 203.32 202.45 174.56 44 E3c_E4a KnownJunction 0 63.94 24.07 251.20 70.32 89.39 211.87 175.46 133.74 202.92 270.58 427.79 78.03 59.09 170.23 246.99 277.02 211.41 141.69 130.26 91.59 200.59 189.03 224.50 45 E3c_E4b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 2.12 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 46 ER4a ExonRegion 0 48.06 73.49 255.54 83.68 73.03 247.56 293.85 127.07 208.65 311.69 378.66 57.79 46.31 206.42 244.03 348.40 244.54 119.77 127.59 67.35 207.55 279.34 297.54 47 E4_Da KnownBoundary 0 0.00 0.00 7.60 3.20 0.00 9.65 6.23 4.31 7.84 7.44 7.42 0.00 6.82 0.00 14.96 3.93 4.11 0.00 0.00 0.00 2.35 0.00 3.33 48 E4a_E4b KnownJunction 0 43.86 114.72 354.66 114.84 159.08 392.22 558.57 147.25 225.81 381.09 358.99 47.72 53.89 184.18 254.16 340.85 230.76 112.42 138.17 72.42 260.14 443.70 271.80 49 ER4b ExonRegion 0 2.34 2.31 7.07 1.03 0.00 10.73 8.64 4.45 5.00 5.72 8.98 0.00 1.51 3.77 6.87 0.75 2.43 0.00 0.48 2.27 3.90 0.00 10.33 50 E4_Db KnownBoundary 0 3.11 0.00 7.69 4.10 0.00 2.16 1.68 9.65 8.16 7.15 4.90 0.00 0.00 7.06 9.64 4.36 0.00 0.00 4.14 2.56 6.24 0.00 11.35 51 ER4c ExonRegion 0 4.49 1.18 5.12 2.82 1.42 4.45 7.18 3.06 7.11 3.86 5.65 0.08 1.25 3.79 5.80 5.56 3.11 2.74 3.45 2.27 3.72 2.95 5.85 52 E4_Ab KnownBoundary 0 6.00 5.66 10.47 3.00 3.90 4.32 18.81 0.00 6.83 1.18 2.68 0.00 0.00 2.24 9.39 25.21 3.93 7.01 8.85 6.07 8.65 8.02 11.95 53 ER4d ExonRegion 0 85.72 95.31 324.85 108.30 108.40 473.29 583.61 176.78 261.08 395.89 470.08 70.58 50.60 227.23 246.49 214.35 271.46 55.97 79.89 94.06 263.89 290.76 155.68 54 E4_Dc KnownBoundary 0 132.76 128.60 247.80 72.75 96.01 229.36 351.27 131.52 184.66 313.86 512.87 78.33 93.34 210.14 200.88 246.86 281.16 78.22 85.18 61.04 267.37 244.63 113.79 55 E4_Dd KnownBoundary 0 13.63 0.00 7.24 2.06 0.00 0.00 8.52 0.00 2.78 2.58 17.32 0.00 0.00 2.35 4.45 8.54 17.77 2.11 0.00 0.00 3.15 14.57 10.50 56 E4d_E5a KnownJunction 0 133.88 132.02 258.71 60.86 64.60 181.03 323.71 169.76 224.59 314.80 473.75 105.03 87.49 257.70 261.95 239.08 243.66 110.18 113.23 64.75 273.24 229.93 204.62 57 ER4e ExonRegion 0 117.38 119.98 260.49 64.17 69.68 233.66 329.06 151.60 218.46 324.43 543.23 89.66 96.73 260.33 212.15 249.53 309.60 87.46 99.01 67.91 291.90 258.36 172.04 58 ER4f ExonRegion 0 4.78 0.26 4.65 2.66 0.48 4.98 4.18 1.33 2.82 4.23 13.83 0.00 0.72 5.12 5.88 3.20 11.68 2.98 0.25 0.00 1.64 10.20 4.29 59 E4e_E5a KnownJunction 0 0.00 0.00 0.00 2.06 0.00 7.38 1.99 0.00 4.54 5.37 9.42 0.00 0.00 4.77 4.94 3.33 4.21 1.91 0.00 0.00 0.00 10.35 0.00 60 ER5a ExonRegion 0 225.75 105.60 332.51 112.10 86.02 202.45 283.48 166.48 264.67 403.09 572.71 116.62 114.98 326.62 378.87 384.31 296.11 172.87 161.35 89.70 317.33 358.50 319.85 61 E5_Da KnownBoundary 0 20.82 5.66 16.65 9.39 16.13 23.68 31.05 21.85 34.55 17.25 34.48 6.30 13.15 18.78 20.40 27.09 4.30 25.20 17.32 5.37 8.40 39.19 16.65 62 E5a_E5b KnownJunction 0 113.72 87.48 307.80 108.64 77.93 280.12 373.97 118.05 175.55 250.22 486.39 81.33 68.02 275.12 386.80 314.70 278.73 97.75 135.72 66.09 316.24 309.35 212.55 63 ER5b ExonRegion 0 10.82 6.31 19.20 7.49 11.31 25.62 27.43 11.10 22.07 14.76 18.05 1.59 2.19 13.07 13.86 9.02 10.72 5.84 7.27 8.27 7.43 9.33 6.31 64 E5_Ab KnownBoundary 0 10.82 3.09 23.95 2.06 19.35 17.21 34.54 1.77 16.44 22.40 12.16 0.00 0.00 6.89 4.45 12.48 3.83 4.85 18.07 11.70 11.00 5.51 7.26 65 ER5c ExonRegion 0 70.25 57.83 233.39 76.21 62.53 179.46 257.95 107.14 158.18 224.81 351.44 92.99 39.45 266.22 297.16 233.17 195.25 95.73 103.94 51.53 247.93 220.94 180.70 66 E5_Db KnownBoundary 0 0.00 0.00 0.00 4.30 0.00 0.00 0.00 0.00 3.01 0.00 0.00 0.00 0.00 0.00 0.00 3.85 0.00 0.00 4.71 0.00 0.00 0.00 0.00 67 E5b_E6a KnownJunction 0 124.17 70.97 332.66 103.12 92.61 248.49 353.30 176.91 255.50 384.66 392.68 108.64 34.09 313.20 362.32 251.99 212.06 130.16 77.56 83.92 232.41 255.83 171.75 68 E5_Dc KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 69 E5_Dd KnownBoundary 0 0.00 0.00 1.80 0.00 0.00 0.00 0.00 2.18 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 70 ER5d ExonRegion 0 0.00 2.03 3.68 1.36 0.00 5.50 2.65 5.19 2.47 1.15 1.93 0.00 4.69 1.62 5.80 2.97 3.30 0.00 9.56 0.00 4.41 0.00 0.00 71 ER5e ExonRegion 0 0.00 0.00 2.45 1.36 0.00 5.50 2.65 3.46 2.47 0.00 1.93 0.00 0.00 0.00 2.90 2.97 0.00 0.00 3.19 0.00 4.41 0.00 0.00 72 ER5f ExonRegion 0 0.00 0.00 1.29 0.55 0.00 3.09 1.67 2.10 2.75 0.00 0.02 0.00 0.00 0.85 1.67 0.45 0.00 0.00 4.74 0.00 1.93 1.33 0.00 73 ER6a ExonRegion 0 115.36 115.19 282.13 94.54 163.05 343.02 467.59 137.90 227.47 295.84 440.37 106.19 108.43 330.64 340.57 250.78 244.30 135.90 100.60 79.32 264.04 232.12 196.69 74 E6a_E7a KnownJunction 0 75.35 133.27 279.74 115.64 228.35 336.34 581.76 109.67 189.99 260.94 369.09 109.84 122.23 314.79 354.04 198.92 181.86 120.50 116.05 86.22 249.89 221.67 165.18 75 ER7a ExonRegion 0 67.12 92.31 238.97 82.54 96.60 191.09 306.26 126.30 181.04 236.76 353.69 95.06 83.47 239.29 283.19 195.43 166.34 99.59 100.18 68.18 195.46 172.51 150.53 76 E7_Da KnownBoundary 0 141.51 116.10 220.93 69.59 54.84 157.75 252.96 154.52 179.80 246.16 347.93 94.23 46.26 277.89 275.42 137.66 190.93 81.41 97.32 74.21 179.83 192.33 173.54 77 ER7b ExonRegion 0 59.38 71.03 138.38 49.28 48.28 108.17 171.57 98.84 145.16 196.09 238.44 39.77 27.54 185.92 213.70 112.77 156.75 58.60 45.14 57.84 152.59 144.18 103.03 78 E7_Db KnownBoundary 0 76.24 85.12 124.57 43.68 54.84 152.41 187.43 94.84 130.76 164.80 167.04 55.37 18.99 171.82 206.07 114.33 120.62 50.20 42.92 61.42 116.08 187.68 97.06 79 ER7c ExonRegion 0 46.72 33.00 80.45 22.43 48.16 85.69 117.56 39.69 84.30 92.30 138.76 26.66 15.48 89.52 105.36 70.69 82.76 33.78 28.40 31.87 88.51 92.68 52.49 80 E7_Dc KnownBoundary 1 59.71 47.69 48.67 15.72 66.47 133.90 212.95 21.52 47.42 72.66 45.96 5.55 26.78 55.09 62.18 23.84 64.24 28.48 22.31 14.96 71.54 23.33 29.79 81 ER7d ExonRegion 1 25.97 29.35 23.22 5.64 30.59 79.35 104.20 6.26 15.56 22.85 27.79 1.52 10.90 41.44 58.42 12.69 39.88 8.54 10.68 7.42 46.99 13.01 13.57 82 ER7e ExonRegion 0 4.23 9.59 5.78 0.97 0.38 23.58 24.97 3.70 3.71 2.62 4.69 0.00 0.00 8.82 14.92 2.12 12.26 3.70 0.00 0.61 19.52 1.19 2.10