Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SRM Gene 0 167.88 115.08 363.78 162.95 71.90 171.43 137.68 147.56 90.66 270.04 593.44 440.80 536.14 799.49 1053.93 623.56 652.11 190.30 240.18 177.57 665.88 348.62 243.83 2 376957 Transcript 0 134.02 168.76 406.48 202.44 102.53 262.67 173.33 167.06 103.53 322.84 629.01 516.65 567.15 866.73 1071.09 761.44 683.91 260.74 314.94 223.70 677.54 407.61 301.60 3 459997 Transcript 0 0.00 3.22 2.99 0.00 0.00 0.00 2.25 6.98 0.00 3.06 0.00 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 3.07 0.00 0.00 3.93 4 487300 Transcript 0 2.75 1.80 5.24 2.70 0.00 0.91 2.47 1.94 0.94 1.87 2.69 1.57 0.00 8.15 14.12 6.73 3.91 2.56 2.19 0.60 6.03 2.04 2.96 5 465788 Transcript 0 0.61 1.77 9.34 3.79 1.58 0.06 3.38 3.80 0.87 5.20 7.60 5.65 3.36 10.67 11.96 12.88 5.74 3.61 7.27 7.48 6.27 1.33 1.71 6 489073 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 490101 Transcript 0 9.21 2.40 7.96 6.53 7.09 4.72 5.35 4.04 5.13 10.28 26.01 17.99 16.57 23.64 39.11 15.75 16.68 8.71 5.58 3.81 17.29 7.77 6.71 8 475189 Transcript 0 15.50 6.68 6.18 2.64 7.74 5.52 9.66 2.20 2.48 3.62 12.54 8.69 17.14 24.33 36.36 18.62 13.93 1.99 7.93 3.02 13.20 6.35 8.32 9 IG43 Intergenic 0 14.25 6.68 8.23 16.97 9.67 6.38 7.62 5.68 3.11 9.30 2.21 14.12 7.55 4.78 7.27 8.82 3.28 3.21 5.65 4.30 2.81 1.87 2.92 10 IG43_SR1 SilentIntergenicRegion 0 14.72 7.04 8.68 17.68 9.82 6.51 7.91 5.76 3.25 9.56 2.23 14.62 7.61 4.85 7.36 8.93 3.35 3.36 5.90 4.46 2.81 1.97 3.03 11 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 1.83 0.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.59 0.00 0.00 0.00 0.00 0.00 0.00 1.76 12 ER1b ExonRegion 0 20.12 18.60 70.59 21.18 7.01 31.78 18.20 21.57 13.07 57.41 76.15 54.00 36.23 170.97 220.48 79.77 115.95 22.43 34.92 50.07 139.52 44.32 31.31 13 E1a_E2b KnownJunction 0 0.00 3.22 2.99 0.00 0.00 0.00 2.25 6.98 0.00 3.06 0.00 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 3.07 0.00 0.00 3.93 14 E1a_E2c KnownJunction 0 47.19 110.64 323.20 139.14 63.07 200.96 108.07 109.26 61.69 265.80 373.73 359.97 212.65 793.93 964.83 412.71 440.95 154.54 167.72 243.46 504.04 203.30 131.97 15 ER2a ExonRegion 0 2.75 1.80 5.24 2.70 0.00 0.91 2.47 1.94 0.94 1.87 2.69 1.57 0.00 8.15 14.12 6.73 3.91 2.56 2.19 0.60 6.03 2.04 2.96 16 E2_Ab KnownBoundary 0 3.04 3.09 4.64 1.63 3.23 2.50 19.92 5.05 5.01 1.67 9.79 12.30 0.00 11.95 40.79 21.36 8.79 5.26 0.00 3.13 5.19 6.25 8.71 17 ER2b ExonRegion 0 9.98 6.04 21.50 6.66 4.51 10.06 18.38 13.43 5.15 15.40 25.57 29.19 12.60 47.56 74.69 37.11 23.29 5.91 9.83 12.46 29.91 15.95 15.52 18 E2_Ac KnownBoundary 0 14.37 0.00 18.86 3.46 8.66 2.78 12.23 10.10 2.69 9.43 10.27 10.80 6.82 25.37 40.92 11.79 7.48 0.00 3.86 8.88 9.45 6.00 8.11 19 ER2c ExonRegion 0 168.49 112.63 480.68 182.72 117.06 225.44 142.07 181.23 113.80 360.86 713.80 390.41 377.23 1004.30 1182.36 636.63 765.42 245.27 226.69 261.49 859.37 391.58 240.90 20 E2a_E3a KnownJunction 0 353.03 168.85 727.98 301.13 123.01 245.71 130.32 242.46 144.39 529.48 835.74 624.80 799.46 1468.96 1438.04 1041.95 899.86 431.70 256.76 390.73 1131.02 384.67 320.45 21 E3_Ab NovelBoundary 0 149.95 224.83 647.14 312.25 49.58 162.80 97.29 212.76 140.54 463.61 828.16 648.81 539.41 1057.69 1607.40 1108.68 889.01 334.07 349.37 366.63 916.10 582.70 437.83 22 ER3a ExonRegion 0 204.46 200.92 692.33 318.23 84.55 210.61 106.38 228.16 151.05 518.34 962.20 771.51 746.18 1453.02 1676.34 1203.12 1011.89 387.47 326.66 389.15 1161.02 542.86 428.02 23 ER3b ExonRegion 0 137.75 270.97 864.34 385.29 105.67 316.32 257.14 302.81 207.47 632.04 1290.65 744.67 747.64 1801.57 2198.00 1368.89 1452.98 344.95 492.90 469.13 1290.02 807.63 497.50 24 E3_Da KnownBoundary 0 0.00 0.00 9.55 10.72 0.00 0.00 9.19 5.59 1.59 7.17 10.32 0.00 0.00 17.01 29.30 12.05 17.02 2.49 0.00 0.00 7.72 6.25 0.00 25 E3a_E4a KnownJunction 1 170.85 227.20 976.72 368.65 280.31 574.44 509.42 403.59 247.10 711.28 1757.92 567.33 659.53 2050.98 2569.02 1258.73 1961.29 327.07 497.80 528.60 1700.11 897.93 468.81 26 ER3c ExonRegion 0 1.22 3.55 12.35 7.57 3.15 0.12 4.77 7.61 1.74 9.14 9.84 5.00 6.72 21.33 19.47 21.83 11.48 7.23 14.55 4.09 10.19 2.66 3.43 27 E3b_E4a KnownJunction 0 0.00 0.00 6.33 0.00 0.00 0.00 1.99 0.00 0.00 1.26 5.37 6.30 0.00 0.00 4.45 3.93 0.00 0.00 0.00 10.87 2.35 0.00 0.00 28 ER4a ExonRegion 0 132.70 175.29 785.40 307.79 226.77 414.34 349.62 320.26 215.53 600.94 1338.12 783.40 839.43 1608.14 2055.69 939.93 1575.41 263.04 409.09 400.72 1654.28 774.03 363.30 29 E4_Da KnownBoundary 0 95.94 97.81 610.36 241.36 142.78 205.51 226.55 255.32 152.63 473.17 924.92 824.82 913.74 1252.93 1776.01 620.44 1114.07 242.96 191.91 275.74 1263.35 598.92 303.89 30 E4_Ab KnownBoundary 0 275.01 185.56 925.37 508.69 274.19 377.62 201.07 384.70 229.31 605.33 1177.14 1332.88 1821.63 1827.07 2133.64 1722.80 1236.65 596.68 379.02 440.33 1208.49 608.66 687.09 31 ER4b ExonRegion 0 170.98 137.19 895.53 421.18 181.09 288.23 207.11 363.16 228.14 641.08 1150.21 1094.43 1386.57 1631.31 1933.06 1224.52 1285.35 469.39 292.83 358.28 1420.92 633.32 504.37 32 ER4c ExonRegion 0 796.84 281.39 1240.71 702.82 209.32 436.52 363.09 533.80 331.47 949.47 1849.40 1821.90 1895.84 2689.80 3316.84 3185.31 2114.04 852.45 1192.78 669.21 1783.27 1578.27 1230.50 33 E4b_E5a KnownJunction 0 455.64 224.10 1273.34 579.28 151.61 385.40 451.65 547.48 382.98 967.35 1974.13 1583.17 1702.65 2533.95 3039.50 2169.26 2282.09 658.16 1045.96 640.64 2203.60 1312.91 830.67 34 ER5a ExonRegion 0 403.75 252.74 862.49 363.89 147.71 399.55 334.11 398.55 252.23 697.50 1872.73 1269.46 1495.56 2163.08 2411.74 1322.60 2024.12 399.69 501.85 452.46 1959.05 794.34 490.70 35 E5a_E6a KnownJunction 0 558.99 314.81 711.00 343.25 139.81 338.84 250.67 352.58 166.90 555.45 1086.12 1008.63 1067.30 1442.29 2062.18 876.18 1036.84 343.15 252.81 346.69 1314.38 579.21 308.16 36 E6a_E6b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 37 ER6a ExonRegion 0 297.90 229.54 593.46 287.40 105.02 248.02 193.71 287.14 143.81 505.93 950.62 951.13 1001.91 1375.43 1850.82 785.38 952.93 305.11 196.70 298.00 1242.48 533.25 272.74 38 ER6b ExonRegion 0 354.86 395.63 896.23 468.18 244.51 585.21 411.12 391.92 248.90 702.73 1513.30 1189.99 1488.79 1806.27 2248.43 1871.02 1610.79 627.69 777.09 427.63 1528.57 1019.55 771.05 39 E6_Ab KnownBoundary 0 733.61 711.98 837.94 440.14 397.96 981.08 670.92 366.01 222.80 574.47 2043.52 1754.22 2358.94 2841.79 3603.32 2699.12 2225.52 581.13 1308.08 547.13 1828.49 1347.57 1164.86 40 E6_Ac KnownBoundary 0 365.18 266.07 601.61 221.65 204.92 305.17 307.64 202.25 115.02 345.74 794.10 692.33 923.64 1267.18 1564.87 959.92 823.84 245.07 355.49 324.00 1095.07 499.91 359.04 41 ER6c ExonRegion 0 459.71 454.10 875.47 386.04 294.20 621.38 461.60 345.17 197.62 599.43 1604.02 1375.47 1802.38 2305.60 2788.97 1964.72 1719.11 491.13 868.81 466.59 1696.42 985.82 781.73 42 ER6d ExonRegion 0 273.84 308.17 649.95 239.52 192.79 352.04 297.14 226.07 125.95 421.27 1017.99 977.02 1352.77 1600.92 2205.40 939.88 1069.41 247.98 290.85 301.04 1278.77 551.49 339.14 43 E6b_E7b KnownJunction 0 167.36 332.18 673.93 235.53 144.65 347.92 304.68 238.60 146.90 406.90 999.88 1031.14 1536.43 1349.17 2163.18 852.43 1005.05 263.06 232.67 228.63 1090.93 511.42 362.37 44 E7_Aa NovelBoundary 0 886.45 802.29 443.92 526.37 571.05 489.77 983.64 525.13 468.63 495.66 284.23 190.26 412.96 199.01 344.52 693.15 542.59 788.19 639.74 716.38 562.48 356.75 821.53 45 ER7a ExonRegion 0 29.74 12.54 10.64 3.64 15.48 11.05 17.46 4.06 3.24 6.33 23.15 14.78 31.47 45.41 67.50 36.06 26.54 3.60 15.22 5.19 24.20 12.69 16.65 46 E7_Ab KnownBoundary 0 14.08 8.68 18.42 9.22 13.50 11.53 29.54 13.02 8.59 11.15 30.48 18.31 27.27 61.57 62.43 48.79 61.15 4.19 9.51 6.07 15.81 16.10 14.94 47 ER7b ExonRegion 0 135.60 171.55 558.83 227.69 104.99 307.64 301.72 242.30 123.66 422.27 934.83 721.89 994.82 1224.77 1971.95 836.97 950.50 286.92 304.12 250.09 1046.85 504.19 327.48 48 E7_Da KnownBoundary 0 3.19 0.00 1.18 7.19 0.00 0.00 0.00 0.00 3.21 4.46 9.79 12.00 0.00 4.83 9.39 7.09 12.06 1.95 0.00 0.00 8.28 2.76 3.24 49 E7a_E7c KnownJunction 0 607.89 227.79 611.89 258.04 167.66 320.67 264.80 282.71 160.88 466.81 911.18 654.36 1029.15 1134.62 1574.27 904.46 1093.97 412.50 330.27 256.56 1138.00 516.32 498.35 50 ER7c ExonRegion 0 9.21 2.40 7.96 6.53 7.09 4.72 5.35 4.04 5.13 10.28 26.01 17.99 16.57 23.64 39.11 15.75 16.68 8.71 5.58 3.81 17.29 7.77 6.71 51 E7_Ac KnownBoundary 0 2.89 0.00 1.30 5.03 0.00 4.32 6.09 2.51 4.92 4.41 17.53 6.75 14.77 24.49 27.81 7.26 0.00 4.64 3.86 2.88 2.41 5.14 3.33 52 ER7d ExonRegion 0 346.97 156.84 463.05 204.08 51.19 184.82 151.72 187.90 111.75 323.02 709.64 482.90 730.65 961.97 1477.24 756.91 784.84 264.92 317.28 178.67 862.15 422.76 316.43 53 E7_Db KnownBoundary 0 454.97 205.29 528.22 252.32 101.19 223.62 210.13 134.68 115.54 245.52 564.93 205.12 342.35 165.17 485.20 486.62 670.69 236.82 312.39 57.27 764.99 295.57 202.82 54 ER7e ExonRegion 0 383.99 143.33 245.83 112.67 94.08 206.58 163.50 75.80 55.73 124.11 561.18 439.30 670.99 731.29 1185.57 547.98 619.82 93.40 293.73 80.37 654.06 202.35 232.35 55 ER7f ExonRegion 0 1.27 0.81 1.72 1.64 0.00 0.00 1.85 0.35 1.73 0.92 1.93 2.60 2.81 3.25 5.22 1.19 1.32 0.37 0.64 0.85 2.20 0.00 0.00 56 IG42_AR3 ActiveIntergenicRegion 0 2.88 0.12 11.98 4.63 0.02 8.75 9.70 10.80 5.00 16.40 8.23 8.51 0.00 1.38 10.08 4.24 8.47 4.24 2.55 7.70 1.26 1.42 4.48 57 IG42_AR2 ActiveIntergenicRegion 0 0.00 0.00 10.86 4.09 2.85 7.95 13.33 16.82 3.71 19.80 9.54 4.33 0.00 2.82 5.22 11.10 3.30 5.54 5.73 0.14 1.18 0.00 5.48 58 IG42_AR1 ActiveIntergenicRegion 0 1.45 1.80 14.51 2.12 2.49 2.98 5.51 10.31 4.99 14.99 3.22 4.80 0.34 2.34 8.01 4.58 3.67 2.74 6.13 5.05 2.81 1.53 2.40