Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PARK7 Gene 0 307.62 209.65 249.11 192.90 272.98 353.54 76.91 282.24 226.28 337.36 722.25 192.01 114.91 537.41 861.32 503.81 723.90 175.30 196.69 178.42 356.54 347.47 239.50 2 493373 Transcript 0 0.16 0.03 0.04 0.00 0.12 0.06 0.02 1.61 0.13 1.93 0.44 0.00 0.07 1.85 0.22 0.50 0.40 0.06 0.05 0.03 0.13 0.16 0.13 3 460192 Transcript 0 0.11 0.55 0.06 0.09 2.17 3.62 1.07 0.86 0.13 0.05 1.41 2.86 3.81 3.90 2.95 6.60 3.50 0.54 0.83 0.01 0.01 3.66 0.76 4 338639 Transcript 1 1355.87 1102.51 143.84 205.06 858.71 2074.73 238.21 247.04 253.20 345.39 756.51 21.98 27.42 483.86 1155.14 976.00 691.92 497.90 758.36 338.13 573.64 635.79 786.12 5 493678 Transcript 0 2.10 0.99 3.39 4.50 3.74 0.52 1.37 4.11 1.09 5.10 2.44 1.90 3.32 2.72 5.97 3.07 4.01 1.60 1.46 1.95 0.54 2.96 0.70 6 377493 Transcript 0 0.00 3.35 7.69 0.00 3.06 12.95 0.00 0.00 4.22 7.98 7.58 0.00 0.00 2.12 9.64 13.93 8.42 2.53 0.00 5.75 3.15 19.53 0.00 7 465354 Transcript 0 7.54 4.22 5.86 10.05 15.53 8.41 5.42 9.18 9.25 8.78 17.92 14.51 15.10 13.57 22.18 27.92 19.34 2.99 6.49 6.46 6.40 11.53 10.00 8 377491 Transcript 0 0.64 0.09 2.99 1.13 1.69 0.69 0.00 0.88 1.02 1.36 0.11 0.00 0.00 1.35 0.00 0.00 2.37 0.00 0.00 2.96 1.23 0.00 0.00 9 377488 Transcript 0 0.00 0.00 0.00 0.00 1.74 2.17 0.00 0.00 0.22 0.52 0.97 4.34 0.00 1.06 0.00 1.78 0.00 0.00 0.00 0.00 0.00 0.31 0.66 10 497113 Transcript 0 7.38 7.75 13.17 13.37 8.71 7.39 6.98 12.98 17.13 12.85 3.06 3.40 5.20 5.39 14.19 9.00 11.76 20.17 9.38 12.71 5.50 3.39 8.89 11 469225 Transcript 0 33.15 12.10 17.29 15.61 10.62 9.41 1.54 22.41 15.00 25.68 43.69 14.52 7.41 42.78 61.47 30.39 41.63 9.80 11.51 10.36 24.29 25.04 13.26 12 ER1a ExonRegion 0 0.32 0.06 0.07 0.00 0.24 0.11 0.04 1.26 0.26 1.29 0.88 0.00 0.14 1.23 0.44 0.99 0.80 0.11 0.10 0.06 0.27 0.32 0.27 13 E1a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.97 0.00 2.58 0.00 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 ER2a ExonRegion 1 262.80 107.92 28.88 25.94 99.09 251.60 44.44 36.93 28.65 53.56 326.27 7.07 11.73 241.34 590.02 343.08 355.07 88.82 84.94 71.99 133.84 82.30 121.48 15 E2_Ac KnownBoundary 1 1087.82 418.87 114.19 74.12 453.74 925.89 176.92 116.53 80.76 167.14 1128.13 12.15 19.97 417.39 943.82 1011.27 1017.48 237.78 228.71 233.55 406.99 297.29 428.86 16 ER2b ExonRegion 1 747.37 318.59 91.36 62.69 302.66 669.34 131.81 108.70 80.97 157.38 937.24 17.32 35.44 641.71 1430.64 843.75 854.93 221.73 194.66 191.49 341.33 240.53 356.97 17 ER2c ExonRegion 1 1352.08 596.32 158.43 121.66 621.72 1172.12 237.53 196.08 150.79 272.29 1399.65 14.26 76.01 817.27 1523.33 1216.65 1273.47 337.38 344.30 276.53 572.71 439.93 549.24 18 E2_Da KnownBoundary 0 158.62 61.90 5.47 5.89 82.60 280.80 29.19 5.05 4.95 12.57 50.17 0.00 6.82 41.32 100.01 45.80 33.01 28.89 42.73 15.34 28.23 34.35 34.15 19 E2a_E4a KnownJunction 1 1430.48 446.30 207.03 125.43 671.39 848.72 237.51 234.57 168.63 316.65 980.83 64.07 102.27 802.99 1326.79 835.17 1015.89 270.44 222.69 173.98 422.56 314.50 314.39 20 E2_Ad KnownBoundary 1 2142.53 1612.94 162.53 253.28 1278.35 2848.70 345.18 299.76 300.00 379.99 911.07 29.71 41.39 634.12 1590.34 1357.85 900.42 586.86 995.98 478.23 716.37 787.71 1065.50 21 ER2d ExonRegion 1 1355.87 1102.51 143.84 205.06 858.71 2074.73 238.21 247.04 253.20 345.39 756.51 21.98 27.42 483.86 1155.14 976.00 691.92 497.90 758.36 338.13 573.64 635.79 786.12 22 ER2e ExonRegion 1 1326.77 1051.13 212.67 244.96 865.34 1989.47 217.75 303.75 322.50 456.01 752.03 22.22 38.88 396.14 811.84 996.72 743.29 529.98 749.48 335.93 600.24 687.89 783.50 23 E2b_E4a KnownJunction 0 316.95 151.35 295.55 290.77 142.70 270.53 22.43 374.84 390.07 556.69 134.14 17.56 61.68 79.05 158.97 147.74 153.72 493.71 77.08 53.95 79.38 62.64 129.67 24 ER3a ExonRegion 0 1.28 0.19 0.48 0.20 0.25 1.38 0.00 1.75 0.24 0.00 0.23 0.00 0.00 2.69 0.00 0.00 4.73 0.00 0.00 2.86 0.12 0.00 0.00 25 E3_Ab KnownBoundary 0 7.19 0.00 2.66 1.37 0.00 5.00 0.00 3.74 1.22 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.95 0.00 0.00 0.00 0.00 0.00 26 ER3b ExonRegion 0 5.14 4.56 4.35 2.25 3.92 3.65 0.66 4.63 5.23 1.96 2.42 3.25 0.08 2.71 4.46 2.31 3.12 1.27 1.31 0.68 2.22 1.82 3.80 27 E3a_E4a KnownJunction 0 0.00 0.00 5.50 2.06 3.14 0.00 0.00 0.00 1.79 2.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.07 2.35 0.00 0.00 28 E3b_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 2.50 0.00 0.00 0.00 0.00 0.00 6.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29 ER3c ExonRegion 0 0.00 0.00 0.00 0.00 3.48 1.83 0.00 0.00 0.43 1.03 1.93 2.38 0.00 2.11 0.00 3.57 0.00 0.00 0.00 0.00 0.00 0.63 1.32 30 ER4a ExonRegion 1 2257.90 1043.23 495.54 421.68 1111.51 1478.04 382.10 682.39 612.12 965.46 2654.26 48.49 348.94 1193.40 2481.73 2306.37 2574.04 832.60 570.18 360.42 999.16 960.09 889.22 31 ER4b ExonRegion 1 1197.30 677.03 460.64 349.71 885.40 849.13 317.93 558.85 458.18 749.19 2192.52 225.41 270.02 796.24 1430.32 1299.78 2276.00 380.64 384.37 348.62 1059.56 589.94 468.07 32 E4a_E5a KnownJunction 1 196.26 154.84 672.57 571.46 396.10 258.09 77.06 811.05 595.31 1004.85 2983.65 199.26 174.01 961.98 1653.51 664.36 2545.58 452.67 454.41 584.59 1258.96 555.94 381.57 33 E4a_E7a NovelJunction 0 3.04 0.00 5.44 0.00 0.00 0.00 0.00 0.00 5.30 6.10 13.69 0.00 0.00 5.36 9.52 15.21 16.64 1.82 13.93 0.00 5.62 0.00 3.41 34 E5_Ab NovelBoundary 1 357.99 227.13 869.87 777.66 421.99 303.18 142.07 978.79 734.19 1153.32 2658.36 314.95 184.24 1691.57 3524.95 1957.35 3094.15 885.73 1440.42 630.73 1217.38 1700.45 1030.59 35 ER5a ExonRegion 1 259.27 170.24 727.26 612.91 368.58 255.03 80.81 886.08 663.39 1085.79 2919.51 237.97 155.94 1374.64 2360.79 1375.56 2862.11 719.30 986.89 588.75 1291.37 1161.64 729.34 36 ER5b ExonRegion 0 223.46 242.68 969.32 792.92 539.74 529.89 89.24 1080.56 836.12 1242.98 2825.72 464.19 336.73 2099.46 3843.85 2805.69 2926.42 951.64 1141.22 743.21 1226.81 1620.13 1430.46 37 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.01 0.00 0.00 0.00 0.00 0.00 4.41 0.00 3.93 0.00 0.00 0.00 0.00 0.00 3.12 0.00 38 E5a_E7a KnownJunction 0 246.86 369.61 924.48 828.30 1343.38 1449.28 146.49 1091.46 821.55 1128.87 1879.48 511.22 505.81 2051.81 3941.29 3203.86 1964.75 828.74 998.05 731.60 1108.16 1710.31 1384.59 39 E5a_E8a KnownJunction 0 0.00 3.35 7.69 0.00 3.06 12.95 0.00 0.00 4.22 7.98 7.58 0.00 0.00 2.12 9.64 13.93 8.42 2.53 0.00 5.75 3.15 19.53 0.00 40 ER6a ExonRegion 0 0.33 1.65 0.17 0.28 6.52 10.86 1.30 0.57 0.39 0.16 2.02 8.59 4.62 5.15 4.40 12.35 6.29 1.62 2.49 0.03 0.03 7.85 2.29 41 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 1.90 0.00 0.00 0.00 2.21 0.00 6.82 2.12 4.45 3.50 4.21 0.00 0.00 0.00 0.00 0.00 0.00 42 ER7a ExonRegion 0 161.88 336.08 951.52 745.29 1575.08 2347.45 292.84 997.81 780.20 1074.76 1758.45 676.12 637.53 1533.74 2698.65 1885.32 2115.93 467.54 515.02 567.62 1021.38 957.41 773.32 43 E7a_E8a KnownJunction 0 280.79 680.01 1146.77 887.97 2398.22 3621.44 584.36 1017.28 817.03 1141.34 2242.73 822.87 347.06 1707.94 2809.08 1188.92 2058.06 477.87 494.41 610.09 1131.08 721.39 503.39 44 ER8a ExonRegion 0 456.11 881.15 994.16 792.50 1139.98 2137.32 445.00 999.27 794.14 1151.64 2151.37 818.33 315.77 1774.54 2695.35 1199.80 2145.54 517.87 419.69 542.61 1084.32 849.60 574.03 45 E8_Da KnownBoundary 0 9.56 0.00 3.25 4.76 3.57 2.67 2.25 6.70 7.35 15.58 14.42 24.76 12.82 4.30 23.24 23.07 12.06 1.62 0.00 5.75 8.59 2.51 8.54 46 E8a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 47 E8a_E10a KnownJunction 0 969.28 1190.12 1090.80 979.76 744.31 1197.09 520.15 1268.98 955.66 1416.40 2662.67 932.70 462.63 2154.46 3164.23 1309.57 2505.56 652.93 522.09 601.01 1408.77 1007.60 609.49 48 ER8b ExonRegion 0 13.84 4.76 4.35 4.41 4.00 3.43 0.50 4.96 6.48 12.75 9.23 14.67 15.95 13.76 19.05 24.06 21.98 4.50 7.98 5.53 4.12 8.19 11.37 49 E8_Db KnownBoundary 0 16.45 2.83 8.87 9.62 19.10 10.11 0.00 12.57 7.84 16.82 9.32 6.30 12.50 12.54 45.12 33.15 33.47 4.93 7.62 6.39 0.00 7.72 18.18 50 ER8c ExonRegion 0 7.54 4.22 5.86 10.05 15.53 8.41 5.42 9.18 9.25 8.78 17.92 14.51 15.10 13.57 22.18 27.92 19.34 2.99 6.49 6.46 6.40 11.53 10.00 51 ER9a ExonRegion 0 14.75 15.51 26.35 26.74 17.42 14.78 13.96 25.96 34.26 25.71 6.12 6.79 10.41 10.79 28.38 18.00 23.52 40.34 18.76 25.43 10.99 6.78 17.77 52 ER10a ExonRegion 0 1914.01 1314.67 946.93 715.23 1026.13 905.35 315.77 1139.77 868.80 1244.80 3036.83 906.50 533.37 2652.35 3489.71 1711.43 3116.16 599.33 827.06 656.61 1545.41 1383.50 886.93 53 E10a_E11a KnownJunction 0 0.00 0.00 0.00 3.16 0.00 0.00 0.00 2.55 0.00 3.22 2.21 0.00 0.00 0.00 4.45 0.00 0.00 0.00 0.00 0.00 3.15 0.00 0.00 54 E10a_E11b KnownJunction 0 2239.36 815.91 1083.29 779.95 670.80 542.41 146.09 1322.38 955.08 1400.80 2307.48 811.91 323.36 2303.21 3537.43 1663.32 2482.93 543.91 722.84 648.18 1127.93 1373.41 779.37 55 ER11a ExonRegion 0 66.29 24.21 34.59 28.05 21.23 18.81 3.08 42.26 30.00 48.13 85.17 29.05 14.83 85.55 118.48 60.78 83.27 19.61 23.02 20.73 45.42 50.07 26.52 56 ER11b ExonRegion 0 1007.72 392.22 792.55 572.00 562.25 565.46 118.39 874.12 689.98 1055.06 1986.15 813.50 310.20 1856.56 2649.91 1217.65 2015.87 424.84 396.11 508.93 1093.33 906.73 565.21 57 E11_Da KnownBoundary 0 539.58 361.19 644.24 423.89 602.21 687.33 114.03 803.20 660.15 948.58 1790.03 624.95 313.62 1865.33 2854.45 1034.94 1808.79 328.39 439.64 509.48 997.09 781.65 539.92 58 ER11c ExonRegion 0 292.44 275.53 566.29 395.74 364.40 421.62 78.47 740.72 588.23 891.49 1519.42 408.00 188.24 1521.61 2391.57 1128.15 1346.09 303.41 420.85 420.91 751.88 1247.46 458.86 59 E11_Db KnownBoundary 0 345.10 340.01 569.55 428.82 365.96 366.61 107.18 752.39 519.24 930.10 1597.77 378.72 232.61 1318.98 1995.55 988.71 1115.75 235.75 434.74 452.47 641.56 2032.52 383.45 60 ER11d ExonRegion 0 220.10 184.29 358.48 238.71 233.39 242.89 48.49 373.63 305.94 498.58 949.30 333.09 201.23 606.51 1097.15 416.93 707.03 134.18 162.18 244.54 344.16 607.41 186.66 61 E11_Dc KnownBoundary 0 751.17 500.50 194.91 167.14 433.02 397.21 142.51 269.61 215.54 372.04 797.62 363.87 109.57 583.32 1223.94 462.02 664.98 83.98 182.41 218.21 161.67 399.55 266.33 62 E11_Dd KnownBoundary 0 0.00 0.00 0.00 2.06 3.99 0.00 3.75 0.00 0.00 1.58 2.05 0.00 0.00 0.00 6.30 6.92 4.30 0.00 0.00 0.00 0.00 0.00 0.00 63 E11_De KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 64 ER11e ExonRegion 0 237.41 143.75 85.31 69.46 124.84 128.49 57.62 112.05 88.20 154.95 343.32 145.56 53.69 261.43 657.58 167.46 265.55 50.34 66.12 76.60 63.53 108.63 88.71 65 E11_Df KnownBoundary 0 3.56 0.00 2.57 10.92 3.90 0.00 0.00 2.51 3.30 3.41 2.68 0.00 0.00 0.00 0.00 10.94 0.00 0.00 0.00 0.00 0.00 3.12 0.00 66 ER11f ExonRegion 0 47.62 43.72 36.76 27.94 50.84 24.76 18.54 45.80 30.26 47.60 92.78 17.32 14.07 60.09 182.78 60.93 87.47 21.25 20.70 22.34 11.02 36.46 19.09 67 ER11g ExonRegion 0 21.17 18.30 25.73 16.35 26.76 9.17 11.92 25.93 13.59 21.79 38.66 8.66 14.07 24.36 58.03 17.83 29.71 11.09 0.00 10.64 4.41 12.50 2.94 68 ER11h ExonRegion 0 2.10 0.99 3.39 4.50 3.74 0.52 1.37 4.11 1.09 5.10 2.44 1.90 3.32 2.72 5.97 3.07 4.01 1.60 1.46 1.95 0.54 2.96 0.70 69 IG47_AR3 ActiveIntergenicRegion 0 2.51 3.00 3.46 6.67 5.98 0.32 2.34 2.97 3.11 8.37 3.26 1.45 0.00 3.97 3.52 5.38 3.97 2.40 1.91 4.18 2.73 2.66 12.49 70 IG47_SR4 SilentIntergenicRegion 0 5.65 3.91 3.01 4.48 12.26 1.46 1.77 6.75 3.08 7.98 4.11 8.12 7.29 8.23 4.08 2.61 5.35 1.29 0.00 3.06 0.77 7.59 5.61 71 IG47_AR5 ActiveIntergenicRegion 0 6.78 3.46 8.80 7.76 9.64 3.64 1.97 13.00 3.53 17.13 8.15 12.76 19.31 17.66 16.33 7.79 7.06 5.63 4.59 7.98 3.67 5.26 18.75