Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ZNF667 Gene 0 10.78 47.62 32.54 20.76 16.93 16.74 8.08 13.66 20.56 15.91 0.16 0.55 0.70 0.18 1.22 0.75 0.51 16.74 15.21 27.31 8.82 15.02 12.38 2 292069 Transcript 0 5.65 25.77 18.47 10.95 8.78 14.50 4.16 7.53 14.62 11.28 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23.04 9.12 30.56 12.82 8.64 12.02 3 342634 Transcript 0 0.11 0.53 1.25 0.86 0.14 0.30 0.73 0.17 0.58 0.58 0.00 0.00 0.27 0.00 0.00 0.00 0.00 1.04 1.81 1.91 0.23 0.12 0.31 4 452518 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 360227 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 ER1a ExonRegion 0 1.83 5.01 0.11 1.36 1.71 4.90 0.24 0.00 1.73 0.94 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.17 0.80 15.10 4.92 2.35 2.68 7 E1_Da NovelBoundary 0 0.00 14.67 1.54 1.96 0.00 7.44 2.08 0.00 1.42 1.13 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16.17 3.76 6.46 0.00 3.12 3.41 8 E1a_E4a KnownJunction 0 6.37 20.72 3.02 5.29 7.98 10.90 3.36 0.00 7.35 3.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16.33 8.28 21.03 5.62 6.06 12.29 9 I1 Intron 0 2.34 7.25 9.38 4.39 4.58 6.28 3.48 4.58 7.01 5.11 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.42 13.00 20.16 9.99 4.80 6.69 10 I1_AR1 ActiveIntronRegion 0 0.60 3.84 9.29 0.57 0.07 3.51 1.23 3.57 6.50 4.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.55 5.79 19.00 8.91 2.08 2.86 11 I1_SR1 SilentIntronRegion 0 2.76 9.39 11.85 4.03 4.69 6.39 2.18 4.96 9.05 3.81 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16.10 13.85 26.28 12.17 5.51 9.42 12 I1_AR2 ActiveIntronRegion 0 3.74 10.05 10.05 5.68 6.24 10.44 5.55 5.59 10.56 6.97 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21.20 21.64 27.41 16.45 6.52 10.01 13 I1_AR3 ActiveIntronRegion 0 3.54 10.44 12.21 7.03 8.96 5.69 3.64 7.69 7.69 6.53 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.59 11.79 17.79 6.32 5.23 4.21 14 E2_Aa NovelBoundary 0 3.26 9.60 5.32 0.00 12.73 0.00 0.00 0.00 1.74 7.17 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.78 18.54 15.15 0.00 2.51 7.51 15 ER2a ExonRegion 0 0.76 0.73 6.56 2.19 0.96 1.32 1.90 0.93 1.32 3.04 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.96 8.01 5.35 1.58 0.75 2.11 16 E2_Da NovelBoundary 0 6.52 3.22 4.85 0.00 19.44 0.00 0.00 2.42 1.39 5.59 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.07 8.09 9.65 0.00 2.69 0.00 17 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 ER3a ExonRegion 0 0.00 0.00 1.18 0.00 0.00 0.00 0.00 0.11 0.05 0.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.02 0.00 2.78 0.00 0.00 0.00 19 E3_Da NovelBoundary 0 0.00 0.00 1.39 4.43 0.00 0.00 10.38 0.00 5.44 1.26 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.75 12.24 5.75 0.00 0.00 12.21 20 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21 E4_Aa NovelBoundary 0 0.00 0.00 3.40 0.00 0.00 0.00 0.00 0.00 0.00 2.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.66 3.95 0.00 0.00 8.14 0.00 22 ER4a ExonRegion 0 9.50 38.88 21.54 9.24 12.74 22.86 9.63 6.99 26.90 18.11 0.00 0.00 0.00 0.00 0.00 0.00 0.00 66.12 36.08 51.76 35.43 17.73 23.75 23 E4a_E5a KnownJunction 0 2.82 30.19 16.14 11.42 11.80 23.68 5.61 8.26 21.87 15.88 0.00 0.00 0.00 0.00 0.00 0.00 0.00 67.15 59.48 56.18 49.17 24.43 42.08 24 ER5a ExonRegion 0 11.68 37.79 25.11 17.06 13.78 17.73 11.12 12.67 36.54 26.73 0.00 0.00 0.00 0.00 0.00 0.00 0.00 76.18 52.07 57.35 37.95 20.52 31.98 25 E5a_E6a KnownJunction 0 12.97 47.36 24.93 20.64 16.55 43.33 4.20 6.65 38.05 40.08 0.00 0.00 0.00 0.00 0.00 0.00 0.00 62.80 22.12 48.00 42.87 25.17 31.24 26 ER6a ExonRegion 0 9.47 35.23 28.63 18.82 12.29 31.94 10.79 15.44 34.72 27.39 0.00 0.00 0.00 0.00 0.00 0.00 0.00 58.85 26.24 54.75 32.06 16.18 35.11 27 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28 E6a_E8a KnownJunction 0 8.74 51.57 52.27 26.20 16.64 27.71 8.88 22.59 34.78 29.58 0.00 0.00 0.00 0.00 0.00 0.00 0.00 47.63 18.26 55.54 27.92 17.51 21.08 29 E7_Aa NovelBoundary 0 0.00 0.00 1.71 12.39 3.48 5.56 12.54 2.55 5.64 5.18 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.47 4.14 7.80 0.00 2.82 16.73 30 ER7a ExonRegion 0 0.00 2.96 1.04 3.80 0.05 0.79 3.22 0.16 2.66 0.85 0.00 0.00 1.88 0.00 0.00 0.00 0.00 2.31 4.64 5.25 0.00 0.06 0.03 31 E7a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 32 ER8a ExonRegion 0 9.12 50.68 43.18 36.52 28.50 38.86 13.95 27.24 45.41 41.14 0.00 0.00 0.00 0.00 0.00 0.00 0.00 54.73 32.61 59.07 40.35 25.07 32.07 33 E8_Ab KnownBoundary 0 3.56 58.54 53.43 45.62 27.67 15.39 19.34 29.29 61.69 46.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 43.77 20.80 36.69 30.39 15.74 15.79 34 ER8b ExonRegion 0 5.74 29.19 20.83 21.79 9.39 22.53 9.04 14.39 27.26 25.91 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21.26 16.43 30.03 10.82 18.27 21.07 35 E8_Da KnownBoundary 0 2.96 17.89 3.31 3.10 7.81 24.87 4.50 3.66 0.00 1.18 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.00 0.00 12.08 2.90 3.06 0.00 36 E8a_E8c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 37 ER8c ExonRegion 0 3.81 10.40 0.00 0.03 2.31 5.71 1.33 0.07 0.31 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.46 0.05 0.06 0.11 0.00 0.00 38 E8_Ac KnownBoundary 0 0.00 0.00 1.39 2.60 4.33 0.00 0.00 0.00 2.75 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.49 0.00 0.00 2.35 0.00 0.00 39 ER8d ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.97 0.00 40 E8_Db KnownBoundary 0 0.00 0.00 1.60 0.00 0.00 0.00 0.00 1.81 3.27 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.66 0.00 0.00 0.00 0.00 0.00 41 E8b_E8d KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 42 E8_Dc KnownBoundary 0 0.00 0.00 0.00 2.06 4.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 43 E8c_E8e KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 44 ER8e ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.08 0.00 45 ER8f ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.63 0.00 46 E8_Ad KnownBoundary 0 0.00 2.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 47 E8_Ae KnownBoundary 0 0.00 0.00 1.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.12 0.00 48 ER8g ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.04 0.00 49 ER8h ExonRegion 0 0.04 0.03 0.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.39 0.01 0.00 50 E8_Dd KnownBoundary 0 0.00 2.57 1.15 1.53 0.00 0.00 0.00 0.00 0.00 2.39 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.00 0.00 0.00 0.00 51 ER8i ExonRegion 0 23.86 107.36 73.63 44.35 37.78 29.76 15.55 28.75 37.64 27.74 0.45 1.52 1.76 0.50 3.35 2.05 1.39 18.78 24.33 47.35 8.87 29.98 18.60 52 IG10_AR1 ActiveIntergenicRegion 0 5.45 25.15 18.76 7.30 7.30 3.63 3.77 11.42 13.35 6.86 0.26 3.75 3.60 0.98 0.59 0.16 0.87 2.04 1.91 10.67 0.52 4.45 0.62 53 IG10_SR1 SilentIntergenicRegion 0 4.37 14.08 15.31 10.07 9.24 4.99 4.98 13.33 12.06 9.67 1.21 4.46 6.96 3.54 2.33 3.83 2.55 5.68 16.10 10.75 0.88 4.83 4.54