Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ZNF772 Gene 0 12.30 71.78 25.68 35.16 23.65 8.58 15.67 35.26 58.39 19.81 7.34 8.33 6.05 24.08 13.91 23.63 20.07 54.74 26.03 69.51 12.99 6.69 9.99 2 356584 Transcript 0 0.53 1.02 0.61 1.02 0.67 0.23 0.00 1.51 2.16 0.86 0.00 0.00 0.00 2.23 0.36 0.74 0.41 6.47 1.59 4.52 0.00 0.52 0.37 3 415705 Transcript 0 0.03 0.69 0.54 0.07 0.99 0.29 0.27 0.20 0.18 0.06 0.16 0.00 0.46 0.48 0.00 0.10 0.50 0.63 0.55 1.62 0.44 0.42 0.73 4 291809 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 425074 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 450712 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 319969 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 427512 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 343280 Transcript 0 3.78 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.54 1.13 2.47 0.00 0.00 2.12 0.00 0.00 0.00 0.00 0.00 2.56 0.00 0.00 0.00 10 IG38_AR1 ActiveIntergenicRegion 0 0.00 1.89 0.64 4.85 0.31 0.21 0.75 2.56 15.53 3.41 0.13 0.83 0.00 0.16 1.03 1.38 0.91 5.81 4.08 1.27 3.67 0.24 2.06 11 ER1a ExonRegion 0 13.95 32.30 14.63 25.01 8.47 10.50 9.56 18.09 52.45 11.80 4.69 0.00 1.48 21.42 7.85 31.50 25.09 109.78 29.88 96.45 29.44 7.72 20.59 12 E1a_E2a KnownJunction 1 0.00 19.34 9.55 35.53 3.65 0.00 4.11 7.89 71.90 8.68 0.00 0.00 0.00 19.37 13.72 46.14 8.60 131.53 40.28 77.79 15.20 5.27 24.84 13 E1a_E3b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.09 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.26 0.00 0.00 0.00 14 E1a_E8b NovelJunction 0 0.00 3.35 0.00 1.50 0.00 0.00 0.00 4.81 5.64 1.67 2.68 0.00 0.00 0.00 0.00 3.76 0.00 58.53 3.58 15.02 0.00 0.00 0.00 15 ER2a ExonRegion 0 1.25 9.75 6.41 9.89 4.94 0.28 2.41 5.81 29.29 7.50 0.00 0.00 0.00 15.95 6.47 20.27 6.60 74.00 23.60 51.12 8.59 5.93 13.70 16 E2_Da NovelBoundary 0 0.00 0.00 11.89 7.86 4.07 7.72 0.00 5.09 8.71 0.00 2.47 6.30 6.17 5.30 4.45 12.30 4.77 43.48 21.37 8.50 5.87 3.00 4.18 17 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 E2a_E3b KnownJunction 0 3.78 11.31 6.48 9.19 4.33 0.00 0.00 8.71 12.53 6.98 0.00 0.00 0.00 12.24 4.45 8.20 4.58 23.88 9.04 22.31 0.00 3.12 0.00 19 E2a_E8b NovelJunction 0 0.00 0.00 1.83 5.39 7.81 2.90 2.25 2.30 17.30 4.14 0.00 6.30 0.00 12.13 0.00 0.00 13.37 24.50 4.80 26.65 0.00 2.27 0.00 20 ER3a ExonRegion 0 1.06 2.03 1.23 2.04 1.34 0.46 0.00 3.02 4.32 1.72 0.00 0.00 0.00 4.47 0.73 1.49 0.83 12.93 3.19 9.04 0.00 1.04 0.73 21 ER3b ExonRegion 0 1.41 15.57 5.69 11.22 9.17 3.06 4.29 17.86 20.94 6.24 3.80 1.75 1.56 12.76 6.12 10.26 8.85 38.25 14.44 31.97 16.55 3.72 8.60 22 E3a_E4a KnownJunction 0 0.00 0.00 0.00 1.86 0.00 0.00 0.00 0.00 1.22 1.24 0.00 0.00 0.00 5.12 4.45 0.00 3.93 0.00 0.00 2.43 0.00 0.00 0.00 23 E3a_E8b KnownJunction 0 5.63 19.73 7.84 9.06 3.31 7.44 0.00 13.23 24.28 6.23 4.79 0.00 0.00 6.95 0.00 12.22 4.39 13.60 22.49 31.89 12.11 0.00 3.76 24 E4_Aa NovelBoundary 0 2.96 9.08 3.08 7.52 0.00 7.33 0.00 4.27 16.06 1.61 0.00 0.00 0.00 0.00 5.19 12.73 4.30 15.34 9.60 14.96 3.15 0.00 0.00 25 ER4a ExonRegion 0 3.76 1.89 0.69 3.59 0.00 3.02 0.68 2.65 6.39 1.93 1.89 3.67 1.75 10.96 0.79 1.53 3.03 5.47 3.67 6.96 4.65 0.63 0.00 26 E4_Da NovelBoundary 0 10.45 0.00 3.34 3.90 0.00 8.18 0.00 5.09 13.51 0.00 2.11 0.00 7.30 11.71 0.00 0.00 4.21 7.79 0.00 5.43 8.34 3.12 0.00 27 E4a_E8b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28 E4b_E8b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29 E4c_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 30 E4c_E8b KnownJunction 0 3.78 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.54 1.13 2.47 0.00 0.00 2.12 0.00 0.00 0.00 0.00 0.00 2.56 0.00 0.00 0.00 31 ER4b ExonRegion 0 5.64 1.36 1.23 1.36 0.00 5.50 0.00 0.00 4.94 0.15 2.06 0.00 4.38 7.90 0.00 0.00 0.00 5.54 0.00 3.69 5.44 2.08 0.00 32 E5_Aa NovelBoundary 0 3.56 0.00 3.02 3.83 0.00 0.00 0.00 2.51 5.18 0.00 0.00 0.00 0.00 0.00 6.30 0.00 0.00 7.30 18.64 12.40 3.03 0.00 0.00 33 ER4c ExonRegion 0 3.53 0.00 0.68 1.67 0.00 0.82 0.00 3.46 6.18 1.53 1.93 0.00 0.00 4.33 0.00 0.00 1.83 4.72 1.06 2.13 2.20 2.55 0.00 34 ER5a ExonRegion 0 0.00 0.00 0.00 0.00 0.57 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.22 0.00 0.00 0.33 0.00 0.00 35 E5_Da NovelBoundary 0 0.00 6.25 1.24 1.83 0.00 0.00 2.25 2.34 11.34 1.61 0.00 0.00 6.49 2.47 0.00 8.03 12.90 25.83 4.52 14.25 5.68 2.88 11.35 36 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 37 E6_Aa NovelBoundary 0 7.56 3.35 10.73 3.36 0.00 5.11 0.00 8.58 12.36 2.53 0.00 6.30 8.28 4.47 0.00 7.52 4.02 19.77 4.61 30.17 0.00 0.00 3.67 38 ER6a ExonRegion 0 0.00 0.00 0.00 0.00 7.23 1.70 0.00 0.00 0.00 0.00 0.00 0.00 3.65 1.26 0.00 0.00 0.00 1.75 3.01 0.00 2.08 1.97 2.77 39 E6_Da NovelBoundary 0 0.00 0.00 12.00 3.23 0.00 0.00 2.21 4.11 17.65 1.56 0.00 0.00 0.00 4.83 0.00 0.00 4.77 29.93 17.04 15.79 8.77 0.00 4.35 40 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 41 I6 Intron 0 2.27 9.83 6.37 3.82 0.72 0.00 2.13 3.46 6.42 3.21 1.56 0.96 0.00 2.82 2.43 2.39 2.66 15.05 9.41 15.99 4.14 1.68 7.88 42 I6_SR1 SilentIntronRegion 0 2.30 9.93 6.44 3.86 0.73 0.00 2.15 3.49 6.49 3.25 1.57 0.97 0.00 2.85 2.45 2.42 2.69 15.21 9.47 16.16 4.18 1.70 7.97 43 E7_Aa NovelBoundary 0 0.00 8.09 5.26 6.93 10.87 0.00 2.25 0.00 5.18 2.95 2.68 0.00 13.64 4.83 4.45 0.00 0.00 17.66 0.00 12.27 12.29 0.00 7.51 44 ER7a ExonRegion 0 0.00 0.11 0.30 0.00 0.00 0.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.09 0.00 0.00 0.18 0.00 0.00 0.46 0.00 0.00 0.00 45 E7_Da NovelBoundary 0 0.00 18.75 1.71 5.63 6.96 0.00 3.53 2.55 4.17 4.75 2.68 0.00 0.00 2.41 0.00 7.60 8.51 8.42 24.85 17.51 0.00 2.51 0.00 46 E7a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 47 ER8a ExonRegion 0 0.24 5.42 4.02 0.53 0.15 0.61 2.13 1.63 1.44 0.45 1.29 0.00 0.00 2.53 0.00 0.83 3.85 3.08 1.42 12.53 1.10 1.39 3.10 48 ER8b ExonRegion 1 7.69 27.45 11.78 16.72 7.89 4.83 14.67 36.12 39.19 13.46 10.89 4.76 1.56 24.01 2.66 31.85 17.66 80.19 30.95 92.69 21.45 10.28 8.32 49 E8_Da KnownBoundary 0 18.23 32.43 12.77 25.90 10.10 5.17 27.69 51.42 59.20 18.27 14.06 12.60 6.82 34.38 4.45 31.02 31.14 135.84 11.67 94.92 20.14 7.84 3.76 50 E8a_E8c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 51 E8a_E8d KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 52 ER8c ExonRegion 0 8.35 55.08 14.20 25.68 19.93 8.62 15.47 39.33 73.41 16.14 11.46 5.63 5.73 38.77 9.81 34.64 30.50 114.96 42.15 98.54 31.07 8.50 21.08 53 E8_Ac KnownBoundary 0 11.04 42.82 17.53 28.04 7.89 5.34 4.02 27.23 50.32 6.26 7.05 0.00 0.00 5.42 0.00 12.39 13.09 72.79 37.18 55.67 14.52 0.00 4.35 54 E8_Ad KnownBoundary 0 0.00 18.15 11.12 3.50 3.23 0.00 0.00 15.57 29.77 9.94 2.68 6.30 0.00 12.83 4.45 15.89 26.37 74.66 36.90 50.24 6.05 6.25 7.85 55 ER8d ExonRegion 1 9.88 49.82 21.85 33.39 10.70 11.00 3.97 41.19 86.05 12.62 10.63 8.66 0.78 27.34 5.80 25.76 41.26 164.14 50.97 92.91 22.77 6.60 11.75 56 ER8e ExonRegion 0 8.25 59.22 20.13 30.69 17.26 8.15 10.97 27.48 67.57 20.05 10.39 5.50 5.89 29.84 10.03 37.24 35.83 134.43 43.46 109.90 22.02 7.17 17.84 57 E8_Db KnownBoundary 1 17.04 122.22 112.98 89.33 41.85 37.99 39.17 97.14 162.06 129.02 38.06 19.21 13.47 46.27 8.90 62.97 97.24 194.54 55.63 184.34 31.32 8.27 32.78 58 E8b_E8e KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 59 ER8f ExonRegion 0 9.97 68.23 23.20 25.38 20.20 10.99 16.26 35.64 82.05 23.33 11.78 8.32 5.58 35.26 10.94 31.41 33.26 109.49 36.21 98.18 21.32 8.16 20.86 60 E8_Dc KnownBoundary 0 10.22 77.68 29.74 24.27 47.20 0.00 21.77 33.72 78.12 20.12 14.90 5.85 0.00 12.07 0.00 18.80 55.26 130.00 51.20 90.06 16.62 3.12 30.05 61 ER8g ExonRegion 0 12.16 106.22 28.61 44.10 24.97 9.55 19.35 44.49 80.97 23.32 11.17 9.88 4.85 35.24 15.05 39.33 27.38 77.26 38.00 94.12 21.52 7.39 11.37 62 E8_Ae KnownBoundary 0 18.00 101.30 33.23 73.82 62.99 13.69 44.25 59.15 94.30 29.41 12.63 12.00 6.82 26.96 23.12 31.27 40.39 58.37 34.17 77.08 0.00 8.02 16.73 63 ER8h ExonRegion 0 6.19 77.20 48.43 74.16 44.74 15.10 27.84 50.17 97.18 34.67 13.70 6.92 17.04 35.49 21.79 35.41 26.21 45.29 29.52 94.71 7.47 14.94 9.92 64 E8_Dd KnownBoundary 0 16.74 70.84 46.86 90.53 23.43 8.63 8.35 41.24 101.39 33.52 7.58 0.00 21.91 36.67 8.90 23.24 11.69 44.02 40.19 126.49 3.15 22.35 7.94 65 ER8i ExonRegion 0 15.60 77.09 31.25 40.48 29.75 8.34 17.21 38.18 48.65 21.10 4.93 10.43 7.81 17.47 17.56 14.39 13.15 17.66 17.79 49.98 4.08 6.13 4.83 66 IG37 Intergenic 0 6.47 30.40 29.80 30.40 12.82 1.41 5.18 6.83 14.56 4.24 0.54 1.55 2.46 1.72 3.81 3.18 1.34 17.99 11.99 21.93 1.79 3.34 4.14 67 IG37_AR2 ActiveIntergenicRegion 0 2.77 17.41 21.72 31.93 9.44 1.29 4.94 5.45 11.12 3.79 0.19 0.80 2.42 1.93 3.84 2.70 0.67 5.54 7.06 12.64 0.22 3.78 2.37 68 IG37_SR1 SilentIntergenicRegion 0 7.35 30.44 36.63 33.61 16.20 1.77 5.97 7.66 17.67 4.78 0.83 1.39 2.97 1.81 3.99 4.15 1.66 23.71 15.97 26.14 2.52 3.58 5.89 69 IG37_AR1 ActiveIntergenicRegion 0 24.91 139.25 54.70 56.49 19.09 1.31 5.19 16.54 26.26 9.75 0.00 5.36 1.38 2.39 7.91 2.12 3.53 43.29 14.77 53.88 3.93 4.46 1.05