Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ZNF154 Gene 0 69.64 118.36 114.01 73.33 44.91 16.61 27.81 68.27 119.97 19.25 5.92 14.63 33.82 10.68 28.02 17.65 19.81 106.27 33.85 122.13 27.31 16.48 32.98 2 426889 Transcript 0 27.77 36.62 26.97 18.74 22.35 8.62 14.24 17.69 38.03 8.85 0.25 7.03 4.39 5.18 10.79 5.05 6.51 42.79 15.94 41.12 12.75 4.02 20.39 3 451275 Transcript 0 10.67 8.75 36.90 6.29 7.22 0.00 0.00 27.97 27.84 3.28 0.00 0.00 0.00 2.30 8.90 0.00 4.77 9.12 0.00 12.53 0.00 0.00 3.59 4 317656 Transcript 0 62.97 113.83 115.74 70.32 46.17 17.58 28.24 63.59 105.71 14.97 6.92 17.28 39.14 12.03 33.99 17.83 19.16 74.72 24.67 108.51 18.43 17.55 29.99 5 396157 Transcript 0 18.30 38.61 111.20 65.26 11.88 14.08 4.33 51.79 75.66 51.76 2.63 7.35 0.00 0.00 0.00 0.00 9.26 83.32 23.44 59.19 24.77 8.94 4.27 6 ER1a ExonRegion 0 5.64 9.38 3.40 0.68 1.34 6.11 0.00 3.65 1.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.93 8.62 1.06 6.62 3.55 0.00 3.10 7 E1_Ac KnownBoundary 0 107.28 72.62 30.22 22.08 21.56 35.15 12.28 22.88 31.39 20.20 4.74 0.00 0.00 4.83 4.45 3.93 12.53 85.19 9.60 68.20 29.59 2.51 24.84 8 ER1b ExonRegion 0 52.51 44.35 12.21 8.49 15.85 21.65 6.67 9.11 21.38 1.50 2.75 0.00 0.00 2.81 3.35 3.54 6.60 54.65 6.00 45.34 24.07 1.92 16.60 9 ER1c ExonRegion 0 31.31 28.05 32.21 19.87 7.40 4.83 7.52 21.08 51.97 11.51 4.27 0.00 2.81 5.71 10.60 5.92 12.40 110.93 16.36 69.32 29.48 3.70 14.18 10 E1_Da NovelBoundary 0 3.63 9.21 19.16 18.68 8.32 0.00 7.95 1.85 10.56 17.33 0.00 0.00 0.00 0.00 8.90 10.94 0.00 58.70 0.00 38.09 16.00 0.00 8.02 11 E1a_E2a KnownJunction 0 0.00 26.90 50.80 21.58 4.33 2.16 0.00 26.04 74.10 2.90 5.00 0.00 6.82 0.00 14.83 7.86 12.53 193.88 0.00 100.86 8.59 14.02 27.32 12 I1 Intron 0 26.58 33.51 28.64 35.37 17.10 3.65 11.21 18.51 16.89 18.07 0.82 6.02 7.26 3.21 7.00 8.95 7.79 40.94 40.00 36.39 16.46 3.20 15.85 13 I1_SR1 SilentIntronRegion 0 27.87 33.64 28.81 34.55 16.79 3.13 10.62 19.33 17.82 17.36 0.84 4.91 5.10 3.42 7.08 9.59 8.02 37.31 38.35 35.96 17.02 3.25 16.09 14 I1_AR1 ActiveIntronRegion 0 22.03 33.23 28.16 38.54 18.34 5.56 13.43 15.61 13.58 20.72 0.76 10.07 15.12 2.46 6.71 6.66 6.96 54.34 46.18 38.12 14.51 3.02 15.09 15 E2_Aa NovelBoundary 0 62.90 70.18 39.71 53.37 57.39 27.65 21.86 34.26 26.45 25.06 0.00 6.30 0.00 2.47 8.90 8.54 17.11 47.96 63.15 39.25 13.41 5.69 15.96 16 ER2a ExonRegion 0 19.47 71.74 69.65 48.34 31.50 24.89 18.02 40.07 98.69 17.38 4.98 1.43 7.35 3.96 24.58 5.73 16.04 145.39 22.32 142.12 34.18 11.60 27.03 17 E2_Da NovelBoundary 0 35.49 61.11 45.21 79.38 36.16 0.00 12.45 50.32 19.53 27.35 0.00 6.30 0.00 4.94 9.52 18.88 17.02 93.35 96.47 43.40 22.67 5.27 48.57 18 E2a_E3a KnownJunction 0 10.52 61.96 59.02 29.13 36.16 38.67 22.21 41.12 92.94 0.00 10.42 0.00 0.00 4.94 24.11 15.72 36.37 115.41 4.80 162.80 29.16 8.94 6.66 19 I2 Intron 0 16.73 29.80 24.27 33.46 16.00 3.66 13.43 13.79 12.62 13.81 0.41 7.12 5.35 1.98 4.25 9.15 7.04 31.34 24.96 27.98 11.86 2.70 12.63 20 I2_AR1 ActiveIntronRegion 0 26.40 38.50 26.25 38.50 20.56 3.47 13.28 19.22 15.99 16.37 0.22 9.37 8.42 2.18 5.02 10.27 8.82 33.45 29.43 29.16 15.96 3.48 15.70 21 I2_SR1 SilentIntronRegion 0 12.33 25.87 23.41 31.21 13.95 3.75 13.53 11.32 11.09 12.66 0.49 6.10 3.95 1.88 3.91 8.65 6.24 30.44 22.95 27.50 10.00 2.34 11.26 22 E3_Aa NovelBoundary 0 156.62 89.26 38.08 45.52 59.08 5.56 41.16 16.51 15.42 20.52 0.00 30.46 14.12 2.47 4.45 24.52 32.73 86.06 43.20 41.74 11.92 0.00 33.12 23 ER3a ExonRegion 0 48.10 92.51 120.68 68.18 27.49 16.39 18.76 67.66 144.51 21.22 9.15 10.84 16.09 11.30 30.76 17.78 27.19 188.90 43.65 172.38 54.66 16.26 34.47 24 E3_Ab KnownBoundary 0 167.51 184.51 179.68 122.79 56.88 17.72 49.90 99.23 186.60 39.54 9.42 12.00 27.27 22.07 37.46 34.86 30.48 222.81 174.69 235.92 50.04 31.78 53.01 25 ER3b ExonRegion 0 70.32 119.51 141.99 94.12 66.94 15.60 26.97 74.37 174.13 31.73 7.42 10.86 37.52 13.71 35.54 20.45 23.80 205.67 58.52 203.67 53.26 21.89 48.83 26 E3_Da KnownBoundary 0 57.42 153.85 125.57 117.43 84.13 11.92 53.22 96.28 165.13 36.42 4.84 24.61 32.79 19.13 35.60 12.22 32.35 141.89 81.32 201.21 74.87 26.15 36.11 27 E3a_E3c KnownJunction 0 18.30 38.61 111.20 65.26 11.88 14.08 4.33 51.79 75.66 51.76 2.63 7.35 0.00 0.00 0.00 0.00 9.26 83.32 23.44 59.19 24.77 8.94 4.27 28 ER3c ExonRegion 0 67.09 120.26 123.59 99.98 42.76 16.89 33.08 74.01 165.34 32.96 4.06 18.09 38.69 14.08 26.49 21.21 28.89 166.77 68.68 179.49 62.06 16.58 39.20 29 E3_Ac KnownBoundary 0 113.95 153.46 151.15 104.15 86.25 24.30 34.27 93.98 157.67 40.24 9.32 39.16 40.74 21.66 24.11 12.39 30.95 150.06 64.66 172.64 91.12 25.84 8.45 30 ER3d ExonRegion 0 80.82 134.51 122.25 88.50 56.20 23.29 36.05 90.52 131.35 28.27 5.09 15.97 31.67 12.23 21.42 23.73 30.69 184.26 56.71 162.97 51.51 18.13 51.84 31 E3_Db KnownBoundary 0 305.24 260.74 338.90 234.84 162.22 71.78 111.42 290.31 414.72 258.90 86.18 14.10 41.56 28.49 32.26 94.76 98.27 397.83 112.57 354.68 129.18 57.31 119.17 32 ER3e ExonRegion 0 81.37 117.94 119.67 67.82 46.33 19.57 27.99 70.95 147.09 23.57 5.73 9.69 25.33 10.07 22.50 21.55 24.70 187.06 49.69 147.75 47.56 13.75 43.49 33 E3_Dc KnownBoundary 0 37.19 77.88 66.88 44.28 49.75 17.38 16.34 35.61 101.74 14.72 2.37 6.15 40.26 9.54 22.37 11.88 0.00 95.51 37.27 78.17 31.20 7.78 32.61 34 E3c_E3d KnownJunction 0 54.82 29.53 44.26 16.28 26.66 0.00 0.00 27.23 52.34 1.61 2.42 0.00 13.64 10.30 15.20 0.00 4.77 69.97 0.00 43.91 12.48 6.25 7.43 35 ER3f ExonRegion 0 49.89 63.87 50.54 36.80 43.36 11.12 28.47 31.73 74.76 17.71 0.50 14.06 8.77 10.36 21.59 10.10 10.08 76.95 30.83 75.61 21.94 8.04 37.67 36 E3_Ad KnownBoundary 0 89.20 83.54 62.98 42.32 45.08 14.54 34.31 45.47 95.22 25.12 2.05 37.81 18.51 2.47 15.08 16.83 17.67 74.20 43.30 101.82 39.66 5.88 29.36 37 ER3g ExonRegion 0 58.12 88.97 96.69 70.76 47.70 14.62 18.81 63.89 130.48 23.60 7.50 12.41 32.35 13.18 26.65 19.73 15.12 100.84 45.51 107.28 28.06 12.91 43.75 38 E3_Dd KnownBoundary 0 50.75 120.18 102.51 88.57 72.07 2.61 27.20 46.58 91.06 16.06 2.21 12.60 20.45 16.89 18.91 29.14 26.18 124.03 45.65 117.35 17.36 6.06 52.50 39 E3d_E3e KnownJunction 0 10.67 8.75 36.90 6.29 7.22 0.00 0.00 27.97 27.84 3.28 0.00 0.00 0.00 2.30 8.90 0.00 4.77 9.12 0.00 12.53 0.00 0.00 3.59 40 ER3h ExonRegion 0 75.57 144.73 97.61 83.44 42.92 10.86 35.63 47.97 103.02 26.12 5.03 13.58 33.04 11.36 20.32 24.83 22.06 103.88 54.82 122.00 21.23 13.33 38.94 41 E3_De KnownBoundary 0 56.75 64.40 100.20 90.56 20.20 8.06 34.40 59.27 98.64 31.72 2.68 6.30 31.49 5.12 23.73 11.71 27.49 95.92 23.06 150.59 17.17 17.15 47.12 42 ER3i ExonRegion 0 62.97 113.83 115.74 70.32 46.17 17.58 28.24 63.59 105.71 14.97 6.92 17.28 39.14 12.03 33.99 17.83 19.16 74.72 24.67 108.51 18.43 17.55 29.99 43 E3_Ae KnownBoundary 0 75.42 222.53 339.25 198.88 123.77 27.88 35.95 155.75 282.17 18.27 7.05 24.46 63.31 4.59 15.45 6.75 8.23 33.70 13.08 200.06 14.15 23.45 11.01 44 ER3j ExonRegion 0 128.45 199.38 174.92 111.40 58.60 14.71 31.17 140.34 180.59 18.17 3.02 22.39 56.38 4.42 27.48 7.64 7.93 22.45 8.68 108.54 3.14 27.82 15.52 45 IG50 Intergenic 0 34.10 51.48 52.12 38.03 29.21 6.65 17.15 37.35 56.83 16.83 1.15 7.16 10.59 7.06 14.38 13.00 10.36 68.02 22.22 52.34 14.91 4.56 13.19 46 IG50_SR5 SilentIntergenicRegion 0 11.11 32.82 2.96 1.93 17.28 0.38 11.02 1.78 4.34 1.06 0.00 6.54 23.86 1.48 4.26 4.17 2.98 6.23 3.53 28.38 11.93 0.00 6.16 47 IG50_AR5 ActiveIntergenicRegion 0 34.61 50.93 51.68 39.99 16.22 7.42 11.25 36.52 71.15 18.00 1.42 3.12 6.11 5.36 14.18 16.76 16.63 92.62 25.68 62.05 24.94 2.75 18.60 48 IG50_SR4 SilentIntergenicRegion 0 38.91 42.72 48.69 26.48 22.38 3.89 13.97 33.76 56.39 10.61 1.27 2.48 6.28 4.47 12.16 11.20 10.60 86.44 18.84 50.22 19.82 4.36 14.69 49 IG50_AR4 ActiveIntergenicRegion 0 32.11 45.61 64.60 51.22 26.35 3.38 14.03 44.99 74.18 16.17 0.58 6.38 9.94 5.84 12.25 12.99 9.29 102.78 25.98 62.00 19.83 5.18 16.44 50 IG50_SR3 SilentIntergenicRegion 0 19.07 35.72 36.71 37.65 17.74 9.64 25.41 22.49 42.17 9.85 1.02 11.34 7.98 7.55 14.48 7.35 8.71 75.40 19.57 40.10 9.38 2.41 9.23 51 IG50_AR3 ActiveIntergenicRegion 0 28.72 38.01 62.64 55.10 10.77 6.99 30.20 40.74 73.40 15.48 0.00 9.59 19.99 8.16 25.83 25.90 8.17 90.76 27.45 87.39 13.96 4.02 12.59 52 IG50_AR2 ActiveIntergenicRegion 0 43.56 44.76 67.70 54.21 45.83 8.82 21.92 50.35 78.34 18.69 1.03 10.18 14.83 5.52 16.52 13.12 7.27 53.30 29.87 57.33 12.91 5.47 13.25 53 IG50_SR2 SilentIntergenicRegion 0 20.82 30.37 32.59 26.26 37.53 5.34 17.37 43.63 33.20 8.09 1.06 13.45 14.92 4.11 5.81 2.71 4.21 5.19 6.38 22.09 0.40 4.93 1.60 54 IG50_SR1 SilentIntergenicRegion 0 27.41 109.36 42.66 28.89 28.78 12.94 21.44 19.96 16.60 35.97 2.01 10.07 10.08 20.33 24.06 21.65 17.56 46.86 22.46 52.41 6.36 5.30 11.89