Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 MYADM Gene 0 210.08 54.39 242.98 72.52 80.58 57.77 58.04 155.79 253.06 166.67 80.47 89.99 137.23 48.74 3.45 52.18 43.61 187.24 136.86 73.43 609.62 1187.93 802.14 2 421337 Transcript 0 0.56 2.89 5.99 2.38 0.00 0.90 1.94 4.29 12.18 6.64 0.00 1.35 0.00 0.00 0.00 0.00 0.00 3.52 5.45 4.89 2.79 3.43 2.78 3 336967 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 448420 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 439000 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 3.89 0.00 0.00 1.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 391771 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 391770 Transcript 0 612.85 2.73 55.97 18.31 5.86 21.79 24.13 32.10 40.44 26.68 6.05 3.15 6.49 5.68 0.00 3.85 0.00 9.66 12.99 2.91 233.33 640.62 174.35 8 391769 Transcript 0 0.40 0.00 0.11 0.87 0.00 0.57 2.53 0.00 2.94 0.52 1.32 0.00 0.00 0.00 0.00 0.00 0.00 0.52 0.00 1.31 3.86 1.35 3.58 9 391768 Transcript 0 19.97 3.23 20.67 4.06 3.17 1.77 3.48 4.75 11.47 18.72 3.03 1.98 0.00 3.83 0.00 12.89 10.40 53.48 34.59 22.57 19.83 27.38 43.28 10 414489 Transcript 0 5.68 3.19 0.05 0.00 4.19 1.64 4.15 0.55 0.44 0.00 0.43 7.99 2.69 2.39 1.53 5.32 1.48 1.82 2.81 4.27 8.81 1.87 7.14 11 415619 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 ER1a ExonRegion 0 0.56 2.89 5.99 2.38 0.00 0.90 1.94 4.29 12.18 6.64 0.00 1.35 0.00 0.00 0.00 0.00 0.00 3.52 5.45 4.89 2.79 3.43 2.78 13 E1_Ab KnownBoundary 0 3.48 6.05 9.17 4.86 0.00 2.56 1.68 8.95 38.95 17.11 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.52 4.80 12.46 2.97 11.33 11.61 14 ER1b ExonRegion 0 30.44 8.24 10.70 2.88 4.41 11.68 2.32 18.18 51.63 25.54 0.29 0.07 0.00 1.73 0.00 0.00 0.06 24.70 12.32 19.57 22.99 30.49 74.25 15 E1a_E3c NovelJunction 0 3.78 0.00 1.30 2.76 0.00 0.00 0.00 6.04 6.63 2.87 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.48 8.47 3.26 2.78 5.57 34.91 16 E1a_E3d KnownJunction 0 112.09 21.64 24.66 6.46 20.03 33.45 12.50 41.03 107.55 59.20 2.11 0.00 0.00 3.00 0.00 0.00 0.00 63.30 37.46 17.64 68.57 75.81 178.92 17 ER2a ExonRegion 0 656.54 22.24 43.99 16.09 7.41 21.61 24.18 16.86 31.44 27.34 16.95 2.27 3.31 9.19 0.00 8.23 12.93 7.03 15.20 8.30 394.50 1054.91 404.05 18 E2a_E3c KnownJunction 0 97.13 6.31 6.24 0.00 0.00 0.00 4.02 4.31 1.79 10.29 0.00 0.00 0.00 0.00 0.00 0.00 4.39 8.50 4.61 2.43 53.50 126.94 117.03 19 E2a_E3d KnownJunction 0 1225.70 5.46 111.94 36.63 11.71 39.92 46.94 64.20 80.87 52.78 12.11 6.30 12.99 11.36 0.00 7.69 0.00 19.32 25.98 5.82 466.67 1281.25 348.71 20 E2a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 3.89 0.00 0.00 1.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21 ER3a ExonRegion 0 0.81 0.00 0.22 0.00 0.00 1.13 5.06 0.00 0.22 1.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.03 0.00 0.00 5.12 0.18 7.17 22 E3_Ab KnownBoundary 0 0.00 0.00 3.67 0.00 3.65 4.60 10.51 2.42 1.53 3.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.70 0.00 0.00 11.92 0.00 23.73 23 ER3b ExonRegion 0 5.94 2.97 5.02 1.12 2.57 3.04 5.53 1.74 2.65 5.42 2.09 0.00 0.00 0.86 0.00 0.00 1.06 16.53 8.43 4.56 14.16 2.41 14.06 24 E3_Da KnownBoundary 0 0.00 3.22 4.76 0.00 3.82 2.90 4.15 1.81 2.37 7.23 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28.44 23.53 5.37 14.09 3.06 23.99 25 E3a_E3d KnownJunction 0 0.00 0.00 0.00 1.73 0.00 0.00 0.00 0.00 5.67 0.00 2.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.62 2.59 2.51 0.00 26 ER3c ExonRegion 0 19.97 3.23 20.67 4.06 3.17 1.77 3.48 4.75 11.47 18.72 3.03 1.98 0.00 3.83 0.00 12.89 10.40 53.48 34.59 22.57 19.83 27.38 43.28 27 E3_Ac KnownBoundary 0 102.02 6.25 60.23 18.31 6.71 2.50 16.78 7.19 25.93 41.23 9.58 5.55 7.47 4.89 0.00 23.75 24.59 91.74 65.23 49.86 32.93 41.39 57.02 28 ER3d ExonRegion 0 142.47 17.16 59.14 14.99 12.17 10.69 18.62 14.58 37.27 45.50 20.48 6.90 10.85 8.20 0.00 13.28 15.27 90.45 50.92 55.58 81.74 111.18 93.01 29 E3_Ad KnownBoundary 0 123.73 27.96 30.34 8.96 23.43 5.51 20.40 14.29 29.14 21.89 29.06 7.65 5.84 4.94 0.00 20.25 20.38 67.94 37.37 50.37 55.72 58.36 44.39 30 E3_Ae KnownBoundary 0 526.17 15.06 95.41 21.61 29.97 31.29 48.27 64.53 121.15 97.16 21.16 25.21 21.59 11.71 0.00 21.70 25.06 129.67 74.07 66.99 216.47 349.89 202.65 31 ER3e ExonRegion 0 1043.44 44.18 156.96 44.23 56.43 60.35 71.98 96.95 197.62 137.00 52.54 34.24 22.60 29.53 0.00 38.37 30.61 176.21 108.59 94.58 595.60 1166.96 525.66 32 ER3f ExonRegion 0 403.09 31.26 145.10 35.36 44.28 42.68 59.67 105.36 196.10 153.28 77.37 61.62 37.20 20.25 0.00 33.43 38.25 141.97 80.86 86.51 440.20 481.15 315.95 33 E3b_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 34 E3b_E5a KnownJunction 0 72.83 26.25 158.98 42.98 47.54 42.76 60.28 116.81 254.97 171.24 72.44 31.36 32.47 14.13 0.00 20.34 28.99 136.51 84.43 120.74 524.80 518.40 443.46 35 ER4a ExonRegion 0 17.04 9.58 0.16 0.00 12.57 4.92 12.44 1.66 1.32 0.00 1.30 23.98 8.08 7.16 4.58 15.96 4.43 5.47 8.42 12.82 26.44 5.62 21.41 36 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 37 ER5a ExonRegion 0 43.04 27.79 161.34 34.98 29.43 36.68 43.25 110.04 215.73 158.66 63.79 64.94 56.28 16.24 0.00 11.89 24.21 108.40 66.89 107.09 466.45 434.07 321.07 38 ER5b ExonRegion 0 144.08 43.19 369.46 78.93 51.21 42.11 45.97 234.79 407.06 272.46 144.17 125.44 209.26 68.16 0.00 57.80 73.47 342.39 191.82 137.40 1123.44 1692.24 963.86 39 E5_Da KnownBoundary 0 588.62 74.20 414.50 98.69 56.45 37.93 52.51 322.39 607.37 411.50 162.99 94.98 311.67 108.60 0.00 48.79 88.64 541.88 214.31 121.31 1212.32 2350.39 1083.17 40 E5a_E5c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 41 ER5c ExonRegion 0 929.97 60.71 427.13 95.58 39.99 48.15 45.61 266.36 455.41 315.57 193.22 223.82 432.39 99.67 0.00 85.13 84.43 350.19 234.31 158.34 1393.69 2025.22 1337.22 42 E5_Ac KnownBoundary 0 142.40 35.52 278.17 58.17 24.53 48.95 46.11 149.92 261.63 188.28 126.72 105.63 104.86 44.68 0.00 38.28 54.89 245.98 131.30 81.56 750.97 737.07 625.63 43 E5_Db KnownBoundary 0 99.65 24.34 206.56 49.91 40.49 55.03 24.95 140.39 239.75 150.86 71.23 88.23 144.15 58.74 0.00 31.02 58.91 276.45 90.26 45.32 783.77 766.46 634.76 44 ER5d ExonRegion 0 102.65 23.39 328.02 59.63 27.59 60.40 43.03 172.31 322.75 231.17 130.35 115.81 161.22 72.58 0.00 39.94 73.86 269.77 128.01 78.46 1031.61 942.53 794.18 45 ER5e ExonRegion 0 153.85 50.55 373.32 82.83 34.29 44.72 44.92 233.95 412.54 273.82 127.05 163.41 244.63 82.87 0.00 74.33 63.38 334.68 183.83 127.78 1164.05 1372.92 998.81 46 E5_Dc KnownBoundary 0 321.54 101.76 573.04 157.09 68.93 25.04 64.26 319.80 570.86 371.12 198.73 147.65 462.47 127.79 0.00 110.40 107.62 585.03 328.86 210.99 1570.69 2208.14 1609.86 47 ER5f ExonRegion 0 216.49 65.23 427.69 99.61 61.61 45.19 48.41 275.94 465.97 317.90 134.00 147.31 218.26 75.32 0.32 71.86 81.12 393.01 165.60 140.31 1159.52 1316.66 1019.27 48 E5_Dd KnownBoundary 0 655.82 110.31 558.05 147.33 148.13 111.58 165.08 356.03 598.11 409.97 155.46 186.81 398.03 86.82 6.06 104.50 82.75 573.47 225.79 226.91 1503.48 2193.94 1544.30 49 ER5g ExonRegion 0 385.00 97.73 456.44 123.94 118.62 120.35 97.38 264.56 492.91 329.07 140.19 189.99 389.27 100.03 1.88 100.24 98.83 342.16 253.77 193.37 1403.20 1895.55 1520.95 50 E5_De KnownBoundary 0 387.11 122.15 440.85 125.79 139.13 127.03 68.14 256.71 440.39 255.38 138.77 140.75 243.98 120.84 0.00 147.06 81.81 466.81 310.50 159.67 1247.28 1732.97 1585.53 51 ER5h ExonRegion 0 131.68 88.29 455.75 125.34 89.14 67.55 78.40 294.91 453.06 366.25 147.68 145.57 227.09 66.65 0.77 77.73 68.18 273.44 177.30 128.76 1220.54 1636.62 1114.08 52 E5_Df KnownBoundary 0 483.49 139.45 742.76 224.85 186.16 100.34 118.27 506.36 771.49 511.10 242.06 197.61 624.96 111.84 0.00 188.92 148.01 778.58 405.85 201.47 1719.26 2358.65 2559.36 53 ER5i ExonRegion 0 453.79 126.17 802.43 248.97 192.61 124.32 122.20 581.72 821.82 562.15 285.78 322.78 452.68 156.06 0.00 228.66 131.38 669.50 498.65 206.96 1793.47 4226.82 3061.05 54 E5_Dg KnownBoundary 0 321.32 106.30 585.67 190.35 117.74 93.81 94.99 370.57 558.01 319.12 167.04 143.60 273.36 109.07 0.00 133.98 113.98 295.07 242.36 108.79 1178.34 1891.99 1448.27 55 ER5j ExonRegion 0 206.48 65.03 209.11 75.90 114.70 76.30 74.24 132.28 210.85 124.67 60.97 75.39 110.75 45.52 6.65 48.91 36.13 139.93 132.71 51.22 434.90 1197.60 808.57 56 ER5k ExonRegion 0 7.86 1.16 4.03 0.00 4.20 11.00 6.81 3.21 0.00 6.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.57 2.68 0.00 57 ER5l ExonRegion 0 0.00 0.00 0.00 0.00 0.00 3.67 1.32 0.00 0.00 0.57 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 58 IG9 Intergenic 0 7.52 0.00 5.09 0.28 1.30 0.64 0.92 3.41 7.18 0.36 0.40 0.50 0.00 0.00 0.00 0.21 0.69 0.51 1.11 0.30 2.30 4.94 10.84 59 IG9_SR2 SilentIntergenicRegion 0 7.75 0.00 5.25 0.29 1.35 0.66 0.95 3.52 7.40 0.37 0.42 0.51 0.00 0.00 0.00 0.21 0.71 0.53 1.14 0.31 2.37 5.09 11.18