Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ZNF837 Gene 0 3.35 2.91 26.84 4.69 2.76 3.22 1.10 8.73 9.43 12.71 1.89 1.22 1.51 11.86 12.94 7.91 4.48 16.36 13.36 11.38 9.52 4.66 8.19 2 427624 Transcript 0 1.05 2.30 13.59 2.41 0.49 6.24 0.33 6.58 5.41 5.08 3.24 0.47 0.00 7.78 5.63 3.32 1.08 6.32 7.11 14.42 2.17 5.86 9.16 3 282333 Transcript 0 0.00 2.83 6.21 3.70 0.00 0.00 0.00 4.56 3.12 5.69 0.00 0.00 0.00 7.12 6.30 7.78 4.77 3.73 13.08 2.56 8.83 3.06 3.41 4 IG28 Intergenic 0 2.55 0.54 10.15 1.68 2.90 1.97 2.94 5.58 7.09 4.96 4.90 5.97 3.81 9.42 10.67 6.47 4.68 2.44 3.70 3.37 5.17 1.65 2.95 5 IG28_AR7 ActiveIntergenicRegion 0 10.12 0.67 17.68 2.91 2.31 3.37 3.46 7.32 22.19 9.47 15.08 4.52 2.54 15.99 24.11 9.45 5.30 5.85 4.19 5.55 3.27 2.51 1.84 6 IG28_SR6 SilentIntergenicRegion 0 8.72 0.00 18.02 4.61 3.31 8.68 5.33 1.37 20.49 6.58 10.06 0.00 4.41 10.84 11.18 12.94 3.69 7.93 1.69 4.13 6.61 1.04 0.43 7 IG28_AR6 ActiveIntergenicRegion 0 4.23 0.00 14.00 2.92 2.68 7.34 3.40 0.00 16.41 6.88 7.18 3.09 4.69 12.30 8.70 5.10 3.30 10.56 3.19 6.38 6.93 1.49 0.00 8 IG28_AR5 ActiveIntergenicRegion 0 4.23 0.00 11.03 1.36 2.68 5.50 2.65 1.15 12.97 6.88 7.73 4.33 0.00 14.08 8.70 4.95 3.30 10.47 3.19 6.38 2.20 2.08 0.00 9 IG28_SR5 SilentIntergenicRegion 0 0.93 0.00 2.16 0.82 0.27 0.94 0.81 1.83 2.01 4.87 7.98 1.52 0.00 4.69 5.43 4.34 0.03 3.16 0.48 2.98 3.68 0.73 1.50 10 IG28_AR2 ActiveIntergenicRegion 0 4.23 0.00 0.00 0.00 0.00 3.67 0.00 0.00 0.00 1.15 7.73 4.33 0.00 1.62 2.90 2.97 3.30 1.85 0.00 0.00 9.13 2.08 8.81 11 IG28_AR1 ActiveIntergenicRegion 0 3.89 0.00 7.16 0.00 2.26 2.86 2.26 3.23 5.53 5.00 3.08 1.57 0.00 10.91 13.56 6.76 3.30 0.43 0.00 0.00 7.41 1.83 2.48 12 IG28_SR1 SilentIntergenicRegion 0 2.27 0.63 10.87 1.82 3.27 1.85 3.22 6.18 7.11 5.07 4.54 6.72 4.42 9.91 10.95 6.61 5.05 2.41 4.23 3.65 5.32 1.73 3.23 13 ER1a ExonRegion 0 3.90 0.92 7.08 3.02 3.33 1.12 1.61 3.37 2.62 4.60 0.00 0.00 0.00 4.73 5.31 7.32 6.12 5.27 14.64 5.22 4.06 3.81 9.06 14 E1a_E2a KnownJunction 0 0.00 8.49 11.00 4.59 0.00 0.00 0.00 3.94 5.61 1.18 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.76 4.24 0.00 0.00 0.00 0.00 15 I1 Intron 0 3.50 3.40 20.74 4.79 4.01 1.68 1.06 9.86 10.21 7.62 0.58 1.80 1.36 1.75 3.01 3.33 1.56 8.66 12.35 9.48 3.24 1.57 5.59 16 I1_AR1 ActiveIntronRegion 0 1.61 1.61 13.50 3.19 2.37 1.86 1.48 5.98 10.99 6.22 0.24 2.71 0.61 1.58 3.06 6.12 5.43 6.21 6.74 9.26 2.38 1.79 6.35 17 I1_SR2 SilentIntronRegion 0 2.86 2.93 14.00 3.18 3.86 1.16 0.66 8.44 7.29 4.71 0.41 1.71 0.78 1.38 3.35 4.18 0.81 7.98 10.12 7.43 1.96 1.69 4.96 18 I1_AR2 ActiveIntronRegion 0 8.65 4.36 41.23 8.68 5.76 3.53 1.71 16.50 17.37 15.12 0.30 2.52 2.55 2.64 3.38 3.87 1.77 10.83 21.79 14.03 5.14 1.95 6.98 19 I1_SR3 SilentIntronRegion 0 4.36 5.94 28.29 6.41 5.76 2.16 1.70 12.02 11.93 9.58 0.27 1.36 1.31 1.66 2.10 2.69 0.57 12.60 17.77 9.37 5.01 1.87 6.02 20 E2_Aa NovelBoundary 0 5.85 5.79 24.75 7.09 3.48 0.00 0.00 10.02 11.05 6.47 0.00 0.00 0.00 2.12 0.00 0.00 0.00 9.87 17.04 20.90 0.00 8.63 4.35 21 ER2a ExonRegion 0 4.93 9.34 33.72 6.70 0.34 0.45 0.00 12.00 9.33 9.42 2.88 2.44 0.00 5.64 5.67 3.05 6.33 16.81 17.00 8.94 11.66 2.80 2.96 22 E2_Da KnownBoundary 0 13.93 6.31 40.33 6.56 7.56 2.78 0.00 13.39 12.93 6.61 5.32 12.60 0.00 13.83 13.35 7.86 4.39 17.95 9.51 8.88 8.83 5.39 15.79 23 E2a_E3a KnownJunction 0 0.00 2.83 6.21 3.70 0.00 0.00 0.00 4.56 3.12 5.69 0.00 0.00 0.00 7.12 6.30 7.78 4.77 3.73 13.08 2.56 8.83 3.06 3.41 24 ER2b ExonRegion 0 2.10 4.61 14.14 4.81 0.97 4.03 0.66 9.05 7.83 6.13 2.07 0.93 0.00 8.79 11.26 6.64 2.17 10.62 10.27 14.14 4.34 6.45 13.96 25 E2b_E3a KnownJunction 0 0.00 0.00 13.04 0.00 0.00 8.46 0.00 4.11 2.98 4.03 4.42 0.00 0.00 6.77 0.00 0.00 0.00 2.03 3.95 14.70 0.00 5.27 4.35 26 E3_Aa NovelBoundary 0 0.00 2.76 20.08 1.23 0.00 0.00 0.00 5.91 8.74 4.65 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.22 0.00 0.00 8.96 0.00 7.77 27 ER3a ExonRegion 0 3.30 2.50 28.08 4.64 2.99 3.45 1.17 8.76 9.85 13.68 1.91 1.21 1.77 12.77 13.85 8.32 4.42 17.19 13.25 11.67 9.95 4.71 8.14 28 IG27 Intergenic 0 1.39 4.06 17.56 5.10 2.92 1.35 1.19 10.55 11.36 9.57 0.48 0.70 1.51 2.74 2.01 3.73 1.35 13.70 14.71 7.61 4.27 1.65 3.61 29 IG27_AR1 ActiveIntergenicRegion 0 1.05 4.67 26.94 5.91 3.75 1.47 0.53 9.71 14.54 9.25 0.39 0.71 4.56 3.31 1.58 2.89 1.27 12.97 20.95 9.68 4.07 2.18 2.94 30 IG27_SR1 SilentIntergenicRegion 0 1.44 3.96 16.09 4.98 2.80 1.34 1.30 10.70 10.87 9.63 0.49 0.69 1.03 2.65 2.08 3.87 1.37 13.83 13.73 7.30 4.31 1.57 3.72