Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ZSCAN1 Gene 0 0.68 4.38 14.07 2.64 4.46 5.83 2.91 16.61 19.92 16.31 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13.27 1.97 7.95 0.71 0.58 0.38 2 391700 Transcript 0 0.36 4.53 4.97 1.76 1.79 1.73 1.33 7.71 5.09 5.90 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.36 0.56 3.86 0.19 0.69 0.13 3 282326 Transcript 0 1.09 4.94 9.25 0.69 4.52 7.25 4.27 13.13 16.04 12.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.74 3.10 7.98 0.05 0.04 0.58 4 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.32 1.25 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.53 0.00 0.49 0.00 0.00 0.00 5 E1_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.04 2.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.66 0.00 2.36 0.00 0.00 0.00 6 ER1b ExonRegion 0 2.07 9.10 12.95 1.03 8.28 8.30 4.54 14.36 12.22 16.95 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.65 5.93 13.64 0.00 0.00 1.14 7 E1a_E2a KnownJunction 0 0.00 2.57 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 E1a_E3a KnownJunction 0 7.56 30.65 47.13 3.53 17.83 37.59 20.45 67.03 50.17 63.23 0.00 0.00 0.00 0.00 0.00 0.00 0.00 52.60 20.52 45.32 0.00 0.00 3.67 9 I1 Intron 0 1.33 5.13 8.23 6.01 9.33 5.96 2.70 19.60 15.62 14.25 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17.05 1.70 16.30 0.53 1.21 0.00 10 I1_SR1 SilentIntronRegion 0 1.34 5.14 8.25 6.02 9.35 5.97 2.70 19.64 15.65 14.28 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17.09 1.70 16.33 0.54 1.21 0.00 11 E2_Aa NovelBoundary 0 0.00 2.63 21.20 4.66 15.53 16.58 0.00 33.68 26.85 29.20 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23.92 0.00 18.28 0.00 0.00 0.00 12 ER2a ExonRegion 0 0.00 8.30 0.00 0.00 2.17 0.00 1.07 0.00 0.00 0.09 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.10 0.00 1.69 0.00 13 E2_Da NovelBoundary 0 0.00 5.59 5.94 12.09 22.84 0.00 1.94 12.03 27.95 27.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.94 0.00 23.71 0.00 0.00 3.93 14 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 I2 Intron 0 3.00 26.43 16.16 12.20 28.64 10.01 12.87 37.47 26.74 29.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29.40 1.39 23.00 1.20 1.59 1.28 16 I2_SR1 SilentIntronRegion 0 0.83 20.54 6.61 4.24 13.60 6.22 3.86 16.55 20.25 12.96 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15.95 1.26 14.14 1.06 0.00 0.00 17 I2_AR1 ActiveIntronRegion 0 3.41 29.42 19.03 14.55 33.49 11.44 14.87 43.59 29.46 34.75 0.00 0.00 0.00 0.00 0.00 0.00 0.00 33.39 1.52 25.93 1.32 2.01 1.62 18 E3_Aa NovelBoundary 0 6.22 47.69 14.04 37.12 30.14 18.63 27.56 55.49 36.11 37.28 0.00 0.00 0.00 0.00 0.00 0.00 0.00 49.54 12.42 28.95 2.90 4.90 4.35 19 ER3a ExonRegion 0 3.02 6.49 33.64 2.21 4.01 16.07 7.41 37.08 24.00 38.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24.86 9.78 16.97 0.00 0.00 0.98 20 E3_Da NovelBoundary 0 10.89 67.42 30.40 31.90 23.60 21.98 21.68 41.07 37.90 43.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 32.33 0.00 27.10 0.00 0.00 0.00 21 E3a_E4a KnownJunction 0 0.00 0.00 10.94 0.00 0.00 9.26 0.00 10.02 5.01 13.08 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.19 0.00 3.13 0.00 0.00 0.00 22 I3 Intron 0 2.99 18.15 26.19 15.07 30.83 16.78 11.33 34.37 29.17 27.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24.01 3.19 17.54 0.40 0.66 0.53 23 I3_AR1 ActiveIntronRegion 0 4.63 39.17 28.42 22.09 50.69 22.51 17.59 41.93 41.62 41.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 44.87 5.26 28.88 0.00 1.31 2.15 24 I3_SR1 SilentIntronRegion 0 1.58 24.96 19.35 13.66 46.18 16.50 12.19 35.56 28.58 28.26 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16.64 3.31 13.76 0.54 0.73 0.00 25 I3_AR2 ActiveIntronRegion 0 3.34 13.25 34.94 14.78 28.48 20.08 13.18 37.16 29.65 28.86 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20.99 2.43 17.99 0.56 0.53 0.37 26 I3_SR2 SilentIntronRegion 0 2.37 5.45 17.87 11.67 9.70 8.69 3.99 24.77 20.45 16.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18.79 2.71 11.77 0.37 0.35 0.00 27 E4_Aa NovelBoundary 0 0.00 6.51 17.42 4.93 0.00 8.23 0.00 22.80 6.74 16.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15.34 4.52 10.42 0.00 0.00 0.00 28 ER4a ExonRegion 0 1.58 10.16 36.58 7.57 6.61 7.49 4.13 36.80 31.04 40.83 0.00 0.00 0.00 0.00 0.00 0.00 0.00 38.30 3.34 20.55 2.10 1.11 0.31 29 E4_Da KnownBoundary 0 0.00 12.17 26.40 8.89 6.71 0.00 7.86 59.52 40.34 35.40 0.00 0.00 0.00 0.00 0.00 0.00 0.00 30.18 13.84 26.85 0.00 0.00 0.00 30 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 4.16 0.00 0.00 2.18 7.67 1.13 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.46 0.00 6.01 0.00 0.00 0.00 31 ER4b ExonRegion 0 1.81 11.81 24.83 8.80 6.77 8.65 5.60 38.56 25.12 28.17 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26.29 2.82 13.72 0.96 1.79 0.63 32 E4_Db NovelBoundary 0 0.00 2.76 11.89 0.00 7.30 25.78 2.08 5.63 22.19 16.04 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.88 0.00 0.00 0.00 33 ER5a ExonRegion 0 0.00 1.09 5.84 1.05 4.31 0.98 4.92 4.44 9.67 9.19 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.59 0.00 1.75 0.00 0.00 0.00 34 E5_Da NovelBoundary 0 0.00 0.00 9.14 7.06 3.82 5.56 0.00 9.82 6.63 15.69 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.57 0.00 5.75 0.00 0.00 0.00 35 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.23 7.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 36 I5_AR1 ActiveIntronRegion 0 0.00 3.17 13.34 1.95 6.24 3.25 1.41 7.60 8.88 14.81 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.21 0.54 1.47 0.00 0.00 0.00 37 I5_AR2 ActiveIntronRegion 0 0.00 4.97 13.96 0.00 4.61 2.55 0.00 8.64 3.09 11.09 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.31 3.19 3.78 0.00 0.00 0.00 38 ER6a ExonRegion 0 0.00 2.24 6.74 0.00 1.96 7.40 2.90 5.10 8.11 3.80 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 39 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.60 10.59 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 40 ER7a ExonRegion 0 0.09 0.60 5.03 0.26 3.40 4.74 1.63 7.33 18.72 6.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.51 1.22 2.80 0.37 0.26 0.37 41 IG13 Intergenic 0 0.34 0.50 0.77 0.32 2.88 1.97 0.94 5.36 14.95 2.19 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.85 0.32 0.68 0.03 0.27 0.21 42 IG13_AR1 ActiveIntergenicRegion 0 0.65 1.77 1.98 0.17 8.65 10.00 4.84 9.73 22.66 8.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.29 1.63 0.65 0.23 0.00 0.60 43 IG13_SR2 SilentIntergenicRegion 0 0.18 0.13 0.59 0.10 1.44 0.85 0.53 5.88 19.72 2.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.56 0.28 0.92 0.00 0.18 0.38 44 IG13_SR3 SilentIntergenicRegion 0 0.47 0.74 1.06 0.67 3.70 0.61 0.19 5.18 14.33 0.73 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.60 0.00 1.09 0.00 0.30 0.00