Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ZNF304 Gene 0 38.84 53.48 39.31 38.07 45.99 31.37 27.75 39.77 57.01 48.11 39.32 25.02 20.57 35.72 25.40 36.42 36.49 36.29 34.14 39.42 22.71 25.27 17.61 2 391705 Transcript 0 1.25 2.54 0.44 1.21 1.35 1.19 0.95 3.55 7.59 11.93 1.40 0.43 1.85 2.38 0.53 0.65 2.67 1.78 1.12 3.44 0.27 0.75 3.71 3 282286 Transcript 0 0.00 5.53 25.43 5.99 4.33 19.19 15.06 15.81 26.33 16.63 27.64 5.85 6.17 21.13 13.35 16.66 40.67 33.66 37.74 20.33 31.69 7.47 18.01 4 IG31_SR1 SilentIntergenicRegion 0 7.02 14.33 9.84 9.26 16.64 10.64 18.12 5.34 8.39 6.38 8.01 3.27 8.01 8.32 9.84 6.16 6.84 7.24 15.85 11.47 1.83 7.78 8.52 5 IG31_SR2 SilentIntergenicRegion 0 3.08 11.84 11.43 11.23 11.68 1.87 12.43 29.99 21.56 22.89 1.69 1.61 1.69 1.92 6.07 6.05 6.00 18.78 10.66 10.06 1.44 2.88 4.49 6 IG31_AR3 ActiveIntergenicRegion 0 9.61 37.75 19.83 21.03 23.19 3.72 24.22 70.66 35.40 35.62 1.30 4.35 3.34 3.48 6.63 5.89 5.39 20.25 12.30 11.65 4.05 5.59 7.90 7 IG31_AR4 ActiveIntergenicRegion 0 6.58 48.88 7.13 15.77 27.14 2.82 34.47 42.78 25.54 25.03 0.00 3.25 0.00 3.19 0.00 4.25 0.24 2.18 9.33 8.97 3.46 0.45 3.15 8 IG31_SR3 SilentIntergenicRegion 0 7.38 25.88 1.12 4.44 10.24 1.15 15.09 12.57 8.87 4.89 0.00 1.12 1.48 0.91 3.22 1.50 1.04 1.92 3.22 4.45 0.00 1.97 4.10 9 ER1a ExonRegion 0 1.28 7.61 3.43 4.20 3.18 11.87 7.19 8.10 22.36 18.32 20.89 1.39 1.86 18.99 6.19 21.67 17.88 23.04 26.40 25.66 14.64 5.18 13.87 10 E1a_E2a KnownJunction 0 0.00 10.00 1.83 0.00 3.40 17.04 4.20 4.81 20.60 16.60 18.11 0.00 0.00 21.07 5.32 7.60 4.30 11.11 4.71 18.79 13.34 10.65 4.01 11 I1_SR2 SilentIntronRegion 0 4.56 3.17 3.25 3.17 3.96 1.50 3.05 2.29 8.88 2.28 8.18 1.32 3.65 7.49 1.91 7.72 7.60 8.11 8.99 5.21 4.09 3.55 2.18 12 E2_Aa NovelBoundary 0 29.63 6.38 4.82 4.13 4.33 13.80 7.55 4.07 17.19 1.67 7.32 0.00 0.00 4.77 5.07 4.19 4.21 6.84 0.00 14.70 8.40 11.63 4.35 13 ER2a ExonRegion 0 4.33 16.38 12.08 9.56 9.61 12.81 12.06 14.13 31.81 30.51 34.64 2.22 10.82 26.52 10.55 17.81 32.02 29.81 24.13 32.82 22.47 13.53 9.78 14 E2a_E3a KnownJunction 0 0.00 3.03 0.00 0.00 0.00 0.00 0.00 0.00 7.32 7.82 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.36 0.00 0.00 3.50 15 E2a_E4a KnownJunction 0 0.00 5.53 25.43 5.99 4.33 19.19 15.06 15.81 26.33 16.63 27.64 5.85 6.17 21.13 13.35 16.66 40.67 33.66 37.74 20.33 31.69 7.47 18.01 16 ER3a ExonRegion 0 3.75 4.60 1.32 3.63 4.06 1.18 2.85 8.61 13.86 19.39 4.19 1.29 5.55 4.65 1.60 1.94 3.89 5.33 3.37 5.33 0.80 2.26 3.71 17 E3_Da NovelBoundary 0 21.11 12.37 3.31 7.52 16.21 25.10 4.42 8.34 22.19 20.47 13.42 12.60 6.82 4.71 5.93 0.00 0.00 6.76 4.14 12.40 2.97 7.96 8.11 18 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 2.38 0.00 2.05 1.59 8.60 0.00 0.00 0.00 2.47 0.00 0.00 4.11 0.00 0.00 2.62 0.00 0.00 3.93 19 I3 Intron 0 8.38 7.05 4.97 10.39 8.83 7.72 5.90 7.01 15.34 14.53 9.41 2.35 5.69 5.49 1.42 5.89 4.63 4.85 7.62 8.78 5.27 6.88 7.27 20 I3_SR1 SilentIntronRegion 0 8.41 7.07 4.99 10.43 8.86 7.74 5.92 7.04 15.39 14.57 9.44 2.36 5.71 5.51 1.43 5.91 4.65 4.87 7.64 8.81 5.29 6.90 7.29 21 E4_Aa NovelBoundary 0 3.04 8.68 4.76 2.03 12.99 2.16 5.61 2.55 8.30 3.22 15.58 0.00 0.00 9.71 0.00 3.93 0.00 0.00 4.05 2.75 11.24 0.00 4.35 22 ER4a ExonRegion 0 45.34 61.47 45.49 43.94 53.37 35.21 31.41 45.20 63.18 52.98 42.76 29.21 23.48 38.98 28.85 39.89 39.85 39.07 36.44 42.38 24.39 28.68 18.78