Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ZNF8 Gene 0 24.34 49.26 78.33 33.76 39.98 27.12 34.37 44.19 53.96 72.48 25.37 19.62 17.55 25.40 28.48 38.45 33.92 134.86 84.08 107.60 40.13 22.46 46.17 2 196548 Transcript 0 14.80 31.09 69.16 20.93 26.15 28.51 29.86 34.08 49.71 61.51 23.30 9.69 7.94 22.91 24.41 29.81 34.87 142.89 62.28 108.38 40.68 15.38 35.78 3 438500 Transcript 0 1.63 2.96 11.53 3.38 2.83 2.25 3.68 5.07 7.80 6.65 4.72 3.33 3.86 3.18 4.12 7.16 5.88 16.11 12.13 9.55 7.12 3.09 10.92 4 ER1a ExonRegion 0 0.32 0.00 1.78 0.00 1.22 3.22 3.05 0.00 1.53 2.40 1.52 0.00 0.00 1.92 0.00 1.35 0.90 3.70 3.86 1.55 0.73 1.20 2.94 5 E1_Ab KnownBoundary 0 0.00 3.03 8.66 0.00 3.23 2.50 6.54 0.00 6.45 5.86 4.32 0.00 0.00 2.47 0.00 3.25 0.00 12.60 4.80 2.43 2.90 2.88 3.59 6 ER1b ExonRegion 0 10.53 16.39 36.69 12.75 14.82 23.45 24.24 13.17 19.11 34.93 17.35 1.41 2.96 9.54 14.45 27.62 26.22 87.01 63.32 75.25 29.85 11.93 37.80 7 E1_Da KnownBoundary 0 0.00 0.00 14.01 0.00 0.00 0.00 0.00 0.00 2.95 16.65 4.84 0.00 0.00 2.47 4.45 3.93 0.00 12.73 4.52 3.26 14.58 5.51 6.83 8 E1a_E3a KnownJunction 1 0.00 2.50 24.10 7.09 0.00 0.00 0.00 14.62 22.74 42.15 34.96 5.85 0.00 2.47 10.01 11.54 57.60 27.32 11.77 82.64 51.28 0.00 3.50 9 ER1c ExonRegion 0 0.00 1.27 12.35 2.17 0.00 3.88 1.40 5.39 7.37 5.16 6.25 0.11 0.82 3.52 4.56 11.53 6.97 22.76 14.90 14.18 8.69 2.78 12.44 10 E1_Db NovelBoundary 0 9.04 6.31 17.80 6.16 0.00 0.00 4.37 6.28 7.18 10.48 0.00 0.00 0.00 2.47 0.00 16.32 4.30 27.86 9.32 11.38 12.11 0.00 0.00 11 E1b_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 I1 Intron 0 2.05 0.98 11.92 1.96 0.65 3.10 3.20 4.36 6.23 10.74 7.94 0.00 0.93 3.30 5.86 9.34 10.37 17.54 7.70 17.49 7.46 3.02 4.97 13 I1_AR1 ActiveIntronRegion 0 2.07 0.99 12.03 1.98 0.65 3.13 3.23 4.40 6.29 10.84 8.02 0.00 0.94 3.33 5.91 9.41 10.46 17.71 7.77 17.64 7.52 3.05 5.02 14 ER2a ExonRegion 0 4.88 7.63 22.23 7.98 8.49 2.86 9.65 9.82 16.03 14.79 7.93 9.87 10.76 6.03 7.79 9.94 10.66 25.57 21.49 14.48 12.68 6.50 20.33 15 E2_Da NovelBoundary 0 17.19 12.63 39.53 10.16 24.02 5.56 20.58 15.48 19.24 21.76 10.27 10.95 13.64 14.60 0.00 18.11 35.72 17.66 18.35 29.98 12.48 8.51 28.94 16 I2 Intron 0 6.42 4.02 20.27 5.75 12.34 4.71 7.42 8.15 11.89 9.46 3.82 4.41 4.36 4.89 5.78 11.36 6.09 15.90 15.85 10.87 9.44 5.56 11.42 17 I2_SR1 SilentIntronRegion 0 6.55 4.24 20.15 5.97 13.04 4.70 7.73 8.02 12.45 9.45 3.83 4.48 4.36 5.05 5.99 11.36 6.27 15.80 15.74 10.70 9.42 5.82 11.86 18 I2_AR2 ActiveIntronRegion 0 6.56 2.26 28.61 4.66 6.65 6.48 5.44 12.66 7.81 12.63 4.90 3.60 5.85 4.21 3.94 15.07 5.49 22.52 22.58 16.68 12.79 3.69 8.90 19 E3_Aa NovelBoundary 0 16.60 2.83 64.22 12.99 21.05 4.94 17.67 12.90 14.44 13.57 10.11 18.91 19.64 0.00 4.57 19.48 0.00 32.38 4.80 11.31 27.24 5.76 19.89 20 ER3a ExonRegion 0 8.42 15.36 65.79 23.04 10.60 12.68 8.31 50.85 46.44 75.43 23.94 9.00 6.76 25.30 29.95 49.66 32.85 206.85 101.93 131.96 44.56 19.16 63.87 21 E3a_E4a KnownJunction 0 6.89 19.14 121.08 21.81 50.51 31.74 12.01 33.72 64.84 63.74 19.69 6.30 6.82 27.02 31.03 31.44 17.48 209.46 75.96 118.31 35.95 19.72 63.51 22 ER4a ExonRegion 0 20.33 35.52 89.61 21.91 30.66 42.14 53.30 38.75 62.89 62.70 24.97 10.06 9.14 21.94 23.09 29.10 38.61 175.79 52.23 127.17 56.58 17.78 32.36 23 E4_Da NovelBoundary 0 0.00 0.00 11.32 1.47 3.65 0.00 0.00 17.25 4.46 14.77 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.81 0.00 12.02 0.00 0.00 4.01 24 E4a_E5a KnownJunction 0 27.41 61.83 61.41 17.98 23.60 66.55 79.01 30.76 66.38 69.14 20.16 6.30 6.82 41.73 32.88 28.03 46.47 173.73 62.12 128.79 37.25 14.94 19.80 25 ER5a ExonRegion 0 40.26 83.30 120.38 54.67 66.49 43.21 53.34 69.84 83.14 115.03 37.84 30.34 26.03 39.97 43.89 57.53 50.16 203.36 128.10 168.26 58.37 34.83 64.50 26 IG22 Intergenic 0 72.15 105.90 100.48 48.52 57.82 38.39 39.98 48.40 42.49 61.02 15.56 17.71 30.21 15.64 29.18 38.69 20.38 124.78 106.45 93.09 20.40 22.09 42.17 27 IG22_SR1 SilentIntergenicRegion 0 72.34 106.18 100.74 48.65 57.97 38.50 40.09 48.52 42.60 61.18 15.61 17.75 30.29 15.68 29.26 38.79 20.43 125.11 106.72 93.33 20.46 22.15 42.28