Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ZNF324 Gene 0 17.56 23.75 71.74 22.20 19.61 24.10 14.77 46.46 46.12 61.10 31.45 9.43 15.99 40.97 50.29 48.66 32.66 54.32 40.23 39.53 29.74 19.87 20.32 2 196482 Transcript 0 4.55 10.16 37.58 12.56 12.56 20.69 9.79 23.05 28.27 46.71 16.11 4.64 5.90 21.78 24.98 37.25 23.84 32.54 32.51 26.01 17.82 11.60 14.92 3 IG33_SR1 SilentIntergenicRegion 0 14.57 15.72 21.00 8.42 24.22 10.55 8.74 13.84 15.10 22.56 5.83 19.81 11.44 13.32 14.98 16.53 6.22 6.15 14.71 13.24 3.32 4.91 5.54 4 ER1a ExonRegion 0 1.23 4.71 11.65 1.19 5.08 11.69 9.33 2.85 5.89 10.74 9.97 0.00 0.00 3.16 9.03 16.95 9.57 4.49 12.16 3.84 0.00 3.62 4.54 5 E1a_E2a KnownJunction 0 0.00 0.00 13.01 2.93 8.40 0.00 4.11 13.80 12.07 11.87 0.00 0.00 0.00 0.00 4.45 0.00 0.00 3.48 4.80 3.00 0.00 0.00 4.10 6 E2_Aa NovelBoundary 0 7.04 5.85 20.14 20.24 3.74 7.04 2.12 16.10 6.66 12.60 9.90 0.00 0.00 7.30 17.06 14.44 4.58 8.62 0.00 6.14 0.00 10.47 0.00 7 ER2a ExonRegion 0 2.37 2.50 34.68 16.41 4.07 5.15 0.89 21.73 29.09 43.04 15.23 2.52 3.29 18.22 26.50 33.79 23.91 18.70 32.98 27.27 17.18 12.94 12.67 8 E2_Da NovelBoundary 1 7.26 0.00 23.00 22.34 7.47 2.38 1.72 15.12 17.25 9.54 2.58 0.00 0.00 7.36 46.48 0.00 8.88 8.95 21.18 3.26 2.78 0.00 0.00 9 E2a_E3a KnownJunction 0 6.67 9.14 46.21 12.02 3.82 0.00 1.77 20.91 30.44 77.44 10.16 6.30 6.33 29.25 23.61 74.94 25.53 47.42 63.44 32.79 13.65 20.02 26.55 10 I2 Intron 1 4.36 1.97 19.91 12.06 4.54 3.11 0.96 16.23 11.37 7.45 8.90 1.30 1.40 4.15 22.45 4.32 6.40 6.23 4.24 7.22 2.67 3.53 2.85 11 I2_AR1 ActiveIntronRegion 1 4.88 2.09 23.04 13.03 4.19 3.43 1.36 17.58 12.68 8.49 9.80 1.34 2.23 5.11 26.05 4.54 6.20 7.75 4.34 6.60 2.76 3.62 2.52 12 I2_SR2 SilentIntronRegion 1 6.39 3.54 16.34 8.81 8.03 0.95 0.83 22.05 11.48 11.34 14.78 2.49 0.00 5.02 19.45 8.20 6.05 5.58 5.43 13.20 4.33 5.67 4.35 13 I2_AR2 ActiveIntronRegion 1 2.19 0.93 15.40 12.61 4.07 3.87 0.00 10.91 8.66 2.96 3.80 0.63 0.00 1.10 16.60 1.92 7.89 2.98 3.68 6.34 1.76 2.48 3.30 14 E3_Aa NovelBoundary 0 10.22 3.22 29.18 18.88 0.00 0.00 0.00 20.87 10.27 8.30 22.11 0.00 0.00 9.42 28.18 3.25 8.79 10.86 4.52 9.01 0.00 0.00 4.35 15 ER3a ExonRegion 0 2.06 9.02 44.40 14.06 17.47 25.12 9.21 30.70 31.55 59.07 27.24 7.81 7.38 32.34 29.01 43.29 26.91 38.82 39.15 29.88 34.75 15.31 12.65 16 E3_Da NovelBoundary 0 2.96 0.00 35.36 16.88 0.00 0.00 0.00 6.04 2.86 1.56 0.00 0.00 0.00 0.00 0.00 0.00 4.58 1.66 4.80 0.00 0.00 0.00 4.01 17 E3a_E4a KnownJunction 0 0.00 19.73 36.40 17.81 28.18 77.51 27.38 21.56 39.93 61.06 17.06 5.70 6.82 25.78 28.56 41.10 46.84 56.50 33.51 43.59 28.05 8.39 22.37 18 I3 Intron 0 0.97 1.12 15.13 7.85 2.22 0.84 0.61 5.93 6.44 3.93 8.01 1.64 1.93 3.17 10.37 3.01 4.25 3.47 6.74 2.35 2.43 1.73 1.35 19 I3_AR1 ActiveIntronRegion 1 2.12 0.00 30.43 16.35 2.68 0.92 0.00 13.83 17.50 16.06 17.72 4.33 0.00 2.44 4.35 2.97 13.20 8.62 11.15 2.13 7.71 9.38 2.94 20 I3_SR2 SilentIntronRegion 0 1.30 0.67 26.67 8.90 1.29 0.60 0.44 10.25 11.26 6.91 10.62 0.61 2.81 5.63 13.96 3.36 6.71 6.88 15.50 3.83 3.51 2.54 3.37 21 E4_Aa NovelBoundary 0 0.00 0.00 19.60 24.87 4.33 0.00 3.97 14.21 18.69 6.04 5.11 0.00 6.82 2.47 13.35 8.72 3.65 12.97 14.40 15.28 9.08 8.88 3.84 22 ER4a ExonRegion 0 19.50 26.04 76.69 23.53 20.92 25.36 15.85 49.77 48.90 63.71 33.11 10.14 17.50 43.68 53.71 50.65 34.09 58.33 41.55 41.72 31.10 20.94 21.54 23 IG34 Intergenic 0 10.94 16.29 35.86 16.84 19.03 29.00 10.97 38.76 30.34 62.76 12.59 5.57 6.53 13.77 23.90 15.31 10.04 35.72 38.06 20.69 15.71 11.94 13.16 24 IG34_AR1 ActiveIntergenicRegion 0 20.38 23.97 43.10 27.64 25.20 32.19 19.38 51.77 35.60 62.31 17.51 11.19 6.62 14.08 22.20 20.33 14.08 30.15 46.86 25.19 16.53 12.41 12.30 25 IG34_SR1 SilentIntergenicRegion 0 13.58 17.45 43.30 19.77 17.37 37.59 17.82 49.48 39.63 85.74 16.66 4.68 12.00 14.15 28.19 23.03 13.63 54.10 52.44 22.53 22.61 15.69 17.98 26 IG34_AR2 ActiveIntergenicRegion 0 9.11 14.88 33.99 14.74 18.15 27.70 8.93 35.60 28.63 60.83 11.40 4.70 6.02 13.69 23.82 13.78 9.04 35.06 35.29 19.78 14.96 11.54 12.88