Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 NUP62 Gene 0 57.13 51.74 52.94 25.90 32.56 26.08 30.71 51.88 41.60 57.54 121.09 34.52 41.86 106.44 126.87 97.13 97.33 81.91 53.64 66.79 33.37 28.19 34.27 2 352066 Transcript 1 0.00 0.00 7.42 2.06 0.00 0.00 2.25 4.15 9.29 30.52 65.70 0.00 6.17 31.20 13.35 15.98 70.03 4.19 4.80 6.46 29.53 0.00 7.34 3 413454 Transcript 0 3.70 0.00 1.39 0.00 0.00 2.38 0.00 0.00 7.23 6.85 7.00 0.00 0.00 10.01 4.45 0.00 8.88 4.52 0.00 0.00 0.00 0.00 0.00 4 422090 Transcript 1 6.37 26.25 28.77 20.38 3.14 18.46 6.67 17.99 26.48 38.22 112.45 12.00 26.62 72.99 100.75 39.56 119.78 70.39 80.00 58.61 28.97 16.90 14.94 5 443569 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 391824 Transcript 0 22.92 12.24 24.28 15.62 14.42 12.00 17.58 19.73 18.80 23.67 47.97 20.21 34.48 46.55 66.40 57.95 49.65 50.39 28.25 40.57 19.90 14.44 23.70 7 ER1a ExonRegion 0 0.49 0.86 0.24 0.31 0.00 1.06 0.20 0.47 0.24 0.00 0.00 0.00 0.00 1.75 5.36 5.03 0.63 1.28 0.98 4.42 0.42 0.24 1.24 8 ER1b ExonRegion 1 68.33 70.37 26.23 16.44 21.63 67.40 82.98 26.22 31.89 50.43 147.50 5.03 24.55 124.29 161.66 146.99 152.21 71.74 124.00 101.41 39.15 15.99 60.81 9 E1_Da KnownBoundary 0 27.71 8.49 46.10 152.33 3.82 0.00 19.52 17.05 39.00 38.49 140.09 35.26 39.45 48.80 111.63 31.02 64.24 50.66 53.74 20.20 46.09 13.66 18.78 10 E1a_E2a KnownJunction 0 3.70 0.00 1.39 0.00 0.00 2.38 0.00 0.00 7.23 6.85 7.00 0.00 0.00 10.01 4.45 0.00 8.88 4.52 0.00 0.00 0.00 0.00 0.00 11 E1_Db KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 E1b_E1c KnownJunction 1 0.00 0.00 7.42 2.06 0.00 0.00 2.25 4.15 9.29 30.52 65.70 0.00 6.17 31.20 13.35 15.98 70.03 4.19 4.80 6.46 29.53 0.00 7.34 13 E1b_E1d KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 E1b_E2a KnownJunction 1 6.37 26.25 28.77 20.38 3.14 18.46 6.67 17.99 26.48 38.22 112.45 12.00 26.62 72.99 100.75 39.56 119.78 70.39 80.00 58.61 28.97 16.90 14.94 15 ER1c ExonRegion 1 5.03 16.61 30.43 14.65 3.12 9.93 12.85 20.02 30.00 57.73 156.89 11.00 21.69 86.15 114.00 39.01 157.89 58.36 77.78 58.95 63.17 15.80 23.25 16 ER1d ExonRegion 0 22.92 12.24 24.28 15.62 14.42 12.00 17.58 19.73 18.80 23.67 47.97 20.21 34.48 46.55 66.40 57.95 49.65 50.39 28.25 40.57 19.90 14.44 23.70 17 E1_Ac KnownBoundary 1 119.72 51.57 55.56 48.11 46.35 24.59 43.24 52.94 32.75 54.69 104.24 29.86 97.07 52.56 126.34 94.59 103.23 123.57 36.99 82.45 38.12 26.88 66.67 18 ER1e ExonRegion 0 149.76 43.26 69.36 32.59 49.38 23.28 49.43 60.39 37.95 93.25 201.20 40.67 97.35 143.41 162.91 154.82 216.76 125.59 63.32 121.99 76.86 37.69 76.44 19 E1_Ad KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20 ER1f ExonRegion 0 43.59 14.39 47.01 22.83 21.63 8.87 22.17 51.15 44.00 66.45 216.01 52.42 79.89 179.75 138.04 149.44 180.89 60.56 58.97 83.35 76.60 52.54 67.98 21 E1c_E2a KnownJunction 0 62.68 8.49 77.26 37.66 55.77 36.68 41.65 72.62 63.48 71.96 442.01 144.80 187.00 390.08 353.67 373.15 312.95 80.92 135.82 54.78 140.54 101.77 171.15 22 Ix Intron 0 15.86 17.24 24.36 10.48 14.54 9.38 13.77 20.16 14.71 28.61 21.58 13.93 16.54 19.62 29.32 30.57 26.13 40.43 19.86 42.70 10.21 8.36 15.87 23 Ix_AR16 ActiveIntronRegion 0 30.36 42.13 29.59 11.33 25.59 10.72 28.84 18.47 10.76 26.33 19.00 14.81 19.64 12.21 34.86 22.88 35.95 29.78 26.23 54.81 9.35 7.18 15.60 24 Ix_SR12 SilentIntronRegion 0 8.66 16.96 30.06 9.93 12.21 7.51 13.60 21.05 12.24 27.85 18.57 10.09 16.06 16.71 31.20 35.65 26.65 50.61 22.87 47.92 10.57 4.85 17.53 25 Ix_SR11 SilentIntronRegion 0 2.23 13.42 24.57 6.69 12.75 6.80 13.53 18.95 10.40 16.93 14.55 17.55 14.84 14.59 36.56 28.05 17.22 41.56 26.06 50.48 11.62 6.55 17.51 26 Ix_AR15 ActiveIntronRegion 0 12.48 15.46 22.95 10.65 12.13 7.90 15.23 18.72 14.80 30.65 14.26 9.66 19.64 17.69 22.80 36.67 16.60 62.35 20.44 44.71 8.45 8.96 18.46 27 Ix_SR10 SilentIntronRegion 0 8.25 7.31 9.93 5.65 8.43 7.91 7.98 10.96 8.81 16.22 13.04 7.66 7.12 14.69 22.55 26.73 20.85 30.44 14.99 35.67 9.15 2.89 10.18 28 Ix_AR14 ActiveIntronRegion 0 11.92 15.80 21.77 9.69 8.63 6.72 11.48 13.64 12.69 30.62 13.34 3.04 8.45 16.46 25.15 26.14 28.68 43.98 18.80 42.56 9.79 4.88 17.97 29 Ix_AR13 ActiveIntronRegion 0 30.00 15.79 37.99 21.41 17.00 11.22 29.44 23.49 28.33 32.18 12.17 0.51 25.66 38.12 40.11 55.77 42.52 42.93 15.18 66.21 8.17 11.03 35.76 30 Ix_AR12 ActiveIntronRegion 0 25.66 12.71 37.68 11.58 20.40 10.09 22.67 23.55 24.39 27.38 18.85 4.33 28.14 27.81 33.36 58.70 46.21 42.96 13.94 63.03 5.23 10.42 35.97 31 Ix_SR9 SilentIntronRegion 0 14.82 6.68 41.14 11.29 15.67 9.17 15.13 18.27 18.70 19.83 18.50 4.33 22.11 24.59 24.87 50.53 35.84 46.72 6.37 45.90 5.67 9.52 24.75 32 Ix_AR11 ActiveIntronRegion 0 0.00 2.03 43.89 11.15 18.24 9.84 10.11 14.61 15.72 13.76 19.15 7.87 12.79 25.69 24.27 39.72 34.51 50.90 13.90 34.43 6.01 7.96 21.62 33 Ix_AR10 ActiveIntronRegion 0 1.41 2.03 43.91 14.08 16.05 8.56 10.37 16.42 16.06 17.97 19.33 8.66 14.07 20.57 24.66 35.17 33.01 60.67 30.26 35.11 4.77 3.13 27.90 34 Ix_AR9 ActiveIntronRegion 0 2.12 0.00 39.08 12.42 18.73 7.34 5.30 22.85 15.64 18.73 17.61 10.58 13.55 16.06 29.01 44.25 35.21 64.06 37.52 40.66 5.88 5.09 24.15 35 Ix_SR8 SilentIntronRegion 0 6.55 6.81 21.50 9.24 16.18 6.39 11.18 18.08 11.56 19.88 10.49 24.50 11.30 17.89 21.20 29.39 19.42 36.69 15.37 31.81 6.82 4.50 19.82 36 Ix_AR8 ActiveIntronRegion 0 18.12 10.84 13.64 14.52 24.34 11.71 18.87 19.89 14.55 20.45 15.57 24.85 34.26 16.18 25.42 23.30 23.80 26.20 17.25 41.11 8.62 5.38 17.34 37 Ix_SR7 SilentIntronRegion 0 10.21 7.01 16.98 6.33 13.72 5.39 11.13 11.07 8.41 20.40 17.93 6.13 8.81 10.91 22.85 19.02 18.93 25.11 13.71 32.52 6.03 4.97 11.41 38 Ix_AR6 ActiveIntronRegion 0 2.47 9.92 23.55 15.00 27.16 9.41 10.02 19.74 11.71 28.87 23.97 23.85 13.54 24.85 32.50 38.01 31.85 50.73 26.18 43.06 10.11 10.82 15.04 39 Ix_SR6 SilentIntronRegion 0 9.00 10.60 16.78 10.89 10.85 3.59 10.60 10.35 9.16 16.27 12.52 9.28 3.56 13.14 19.03 14.59 20.20 32.41 13.93 31.40 4.73 5.37 12.45 40 Ix_AR5 ActiveIntronRegion 0 13.97 20.30 18.40 7.00 14.27 9.32 19.35 15.56 3.15 15.94 20.55 12.12 8.68 9.12 21.18 12.98 22.12 16.26 5.20 22.16 8.34 1.81 13.51 41 Ix_AR4 ActiveIntronRegion 0 13.15 28.50 47.97 18.02 19.47 17.51 14.58 31.91 9.28 38.15 21.21 11.09 5.04 24.12 30.03 37.75 36.97 36.24 22.38 40.77 14.13 9.87 16.70 42 Ix_SR5 SilentIntronRegion 0 13.83 15.08 32.34 11.53 12.91 8.45 9.62 16.92 12.45 25.82 25.49 14.53 15.57 25.32 29.84 33.74 30.52 45.42 21.64 30.51 8.42 8.61 15.91 43 Ix_AR3 ActiveIntronRegion 0 30.48 20.29 37.42 18.36 19.80 10.41 16.15 29.22 25.24 41.39 31.25 19.05 25.94 25.01 49.30 42.26 31.86 58.82 23.06 62.01 18.06 13.43 20.68 44 Ix_SR4 SilentIntronRegion 0 35.44 26.77 34.73 14.76 18.71 12.81 17.68 32.12 22.89 42.26 30.36 23.95 21.90 26.80 38.58 39.99 29.76 45.32 20.54 57.53 15.82 14.07 16.10 45 Ix_SR3 SilentIntronRegion 0 37.39 42.48 28.86 12.27 23.49 15.89 12.50 30.34 37.05 48.93 36.73 12.99 32.83 44.03 32.56 70.01 35.58 68.98 8.49 55.08 13.47 17.36 23.49 46 Ix_AR2 ActiveIntronRegion 0 12.94 21.07 17.51 9.05 11.82 13.50 10.97 14.35 16.73 32.98 24.94 10.98 25.48 24.26 29.66 31.43 25.11 47.15 21.15 39.27 7.81 11.72 12.57 47 Ix_SR2 SilentIntronRegion 0 8.92 17.77 14.52 7.32 14.47 11.61 12.96 18.24 12.23 20.36 21.98 17.31 20.42 18.64 16.10 19.84 23.78 20.53 16.53 28.75 7.03 10.13 11.00 48 Ix_AR1 ActiveIntronRegion 0 22.83 36.77 32.97 14.62 26.60 21.78 27.29 36.90 31.22 52.86 31.74 24.86 22.32 32.01 34.91 27.10 30.99 58.48 41.95 82.70 12.86 14.14 15.49 49 Ix_SR1 SilentIntronRegion 0 15.35 14.03 17.55 6.11 10.89 6.92 9.99 18.99 12.91 24.49 30.54 12.90 16.55 18.99 31.25 28.74 24.72 24.32 14.09 22.71 8.44 11.79 17.14 50 ER2a ExonRegion 0 9.75 8.02 5.58 2.34 2.82 6.30 8.82 5.18 6.43 7.89 23.87 4.95 8.01 22.33 20.00 17.70 20.61 10.93 13.80 10.46 8.16 5.96 7.32 51 E2_Da KnownBoundary 0 10.37 14.01 19.04 9.86 27.76 10.11 6.49 13.06 11.57 5.94 64.65 5.25 29.38 10.71 4.45 28.28 30.39 29.02 27.20 11.57 5.93 4.90 8.28 52 ER2b ExonRegion 0 162.39 161.56 156.95 72.60 98.12 67.45 71.38 158.74 119.09 166.16 328.72 95.14 95.85 285.39 342.29 243.63 242.61 221.49 129.89 169.87 78.28 74.81 77.42