Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AP2A1 Gene 0 77.45 71.01 239.94 90.56 48.33 80.25 39.63 164.24 256.38 165.99 283.77 89.60 97.14 315.64 298.29 324.64 242.88 225.67 175.26 167.30 544.64 259.45 257.83 2 359032 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 354293 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 413690 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 456192 Transcript 0 3.25 0.00 1.23 1.56 0.00 0.00 0.99 0.43 1.24 1.39 8.08 0.00 0.00 7.46 1.45 0.00 3.65 3.13 3.95 4.27 4.06 2.24 0.00 6 ER1a ExonRegion 0 36.92 32.96 17.69 9.61 7.52 15.55 13.74 17.03 33.16 21.82 54.52 7.66 12.96 49.08 61.78 47.79 46.62 17.59 39.15 29.61 118.65 40.58 47.17 7 E1a_E2a KnownJunction 0 48.08 65.91 101.53 42.79 16.55 12.95 12.98 86.17 163.95 113.84 221.79 54.77 53.57 199.72 160.46 141.67 201.78 65.21 70.59 133.40 430.09 147.27 84.34 8 ER2a ExonRegion 0 47.42 78.04 137.26 73.12 46.96 26.42 16.25 116.28 231.41 135.87 245.51 192.63 238.44 296.06 303.33 310.91 223.79 129.32 226.95 214.21 442.82 307.70 307.84 9 E2a_E3a KnownJunction 1 19.48 82.29 208.30 115.07 61.71 26.35 39.04 180.97 316.61 164.99 272.07 366.87 422.37 359.18 244.02 426.30 257.88 270.81 226.17 229.72 418.29 364.40 360.49 10 ER3a ExonRegion 0 48.78 73.45 229.55 115.92 62.59 77.97 50.55 217.98 364.74 214.88 458.76 288.83 251.52 413.73 325.51 403.54 377.62 220.02 297.69 290.66 626.19 470.10 321.61 11 E3a_E4a KnownJunction 0 94.98 139.12 220.96 113.57 41.34 62.35 29.41 250.43 342.18 252.85 397.26 268.89 258.75 446.35 294.09 330.94 392.61 199.93 172.05 314.86 586.64 429.55 281.02 12 ER4a ExonRegion 0 76.94 87.42 192.91 88.71 52.11 56.12 34.78 167.83 276.42 181.52 341.16 255.08 233.08 406.93 335.54 371.75 328.88 247.99 238.18 227.90 676.03 404.55 288.25 13 E4a_E5a KnownJunction 0 48.68 50.71 217.73 79.78 94.65 43.27 30.12 180.48 266.11 170.39 299.18 88.08 146.91 410.50 290.75 364.61 260.03 393.89 217.79 235.28 694.93 277.76 259.16 14 ER5a ExonRegion 0 46.92 65.32 162.23 72.79 42.87 58.99 30.57 129.00 249.03 170.02 327.61 117.16 135.69 411.09 293.72 377.80 294.90 336.22 172.84 186.91 665.01 249.30 276.59 15 E5a_E6a KnownJunction 0 57.05 65.38 187.01 52.04 43.12 74.33 46.64 165.57 222.74 163.99 281.44 54.47 78.89 240.10 224.61 287.87 300.61 198.81 117.18 143.75 626.55 190.31 219.90 16 ER6a ExonRegion 0 56.50 53.01 198.77 69.64 50.71 82.02 40.06 144.89 246.22 165.09 332.84 97.24 105.02 344.11 249.56 355.02 307.05 291.27 181.57 186.92 688.49 277.03 288.97 17 E6a_E7a KnownJunction 0 72.90 52.49 226.07 119.60 23.17 83.13 40.45 201.14 317.42 225.05 316.19 105.18 140.74 402.91 277.64 464.15 295.37 505.57 216.19 219.81 605.79 312.96 323.44 18 ER7a ExonRegion 0 34.12 73.21 172.11 69.52 29.92 53.48 38.41 127.08 209.39 151.56 330.93 111.14 98.79 356.38 277.91 331.71 273.55 253.62 169.61 174.90 656.34 271.97 229.84 19 E7a_E8a KnownJunction 0 12.97 43.74 221.46 57.60 22.92 60.08 25.61 122.07 224.65 123.91 255.38 88.08 67.37 203.01 160.21 173.37 243.76 140.57 62.50 161.58 569.34 217.13 128.22 20 E8_Aa NovelBoundary 0 10.74 14.67 32.85 34.29 11.63 0.00 3.93 37.34 24.65 18.78 4.32 0.00 0.00 6.95 0.00 0.00 4.58 20.10 8.00 15.08 15.14 8.76 7.17 21 ER8a ExonRegion 0 40.27 77.48 315.93 121.79 56.92 87.14 47.61 210.61 308.21 214.25 415.13 117.35 154.03 420.14 325.59 493.73 328.41 355.45 284.32 207.28 740.02 363.59 387.29 22 E8_Da NovelBoundary 0 16.97 3.29 58.57 24.21 24.19 11.53 13.34 24.97 28.33 14.91 9.79 0.00 0.00 14.13 9.52 18.97 15.33 48.09 25.79 6.33 12.79 26.02 3.84 23 E8a_E9a KnownJunction 0 62.38 77.49 316.87 106.65 33.28 84.27 54.36 212.89 347.07 232.65 431.95 62.12 67.37 356.70 293.22 427.49 345.77 240.76 200.19 232.34 802.86 285.29 239.44 24 ER9a ExonRegion 0 82.69 99.51 307.00 112.64 48.42 96.55 50.33 179.05 297.33 198.45 392.50 68.48 100.74 379.16 318.95 434.44 294.09 331.62 214.51 225.33 709.67 305.69 339.16 25 E9a_E10a KnownJunction 1 109.72 88.08 291.80 117.10 70.88 93.87 55.29 132.46 270.86 168.13 321.61 30.16 112.82 444.53 325.98 415.45 244.79 236.82 191.44 225.18 653.36 342.97 335.05 26 ER10a ExonRegion 0 74.66 78.05 249.48 89.57 49.08 83.23 47.22 169.07 287.55 184.15 339.55 88.85 111.67 362.79 369.98 338.93 297.86 299.34 168.17 245.66 676.59 288.25 278.11 27 E10_Da NovelBoundary 0 26.45 40.19 142.54 36.96 13.16 28.05 18.90 69.78 145.80 93.13 59.70 62.27 31.00 80.70 162.56 97.92 104.53 125.52 45.93 106.42 262.00 115.73 137.26 28 E10a_E14b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29 E10b_E11a KnownJunction 0 53.34 120.70 313.12 123.49 7.39 76.26 52.29 175.26 378.73 215.57 418.90 87.78 66.72 485.02 401.26 427.07 416.08 335.19 189.09 254.97 822.69 317.62 300.22 30 ER10b ExonRegion 0 45.51 103.03 279.18 106.76 24.53 65.71 47.66 167.08 324.22 203.58 381.10 102.46 91.46 429.04 394.57 400.74 364.75 331.67 190.59 252.48 792.97 302.46 333.80 31 ER11a ExonRegion 0 50.16 76.34 338.58 141.01 42.75 93.10 48.13 208.87 367.15 239.67 388.79 94.70 136.93 420.74 430.43 453.86 348.06 356.45 214.78 251.62 723.49 339.57 363.77 32 E11_Da NovelBoundary 0 36.60 0.00 40.54 23.57 24.45 24.93 16.43 50.27 25.84 33.55 21.74 0.00 0.00 19.42 28.31 6.92 21.69 73.21 13.46 26.53 32.62 18.86 30.65 33 E11a_E12a KnownJunction 1 53.49 62.55 361.90 179.33 31.83 110.16 64.21 233.34 350.40 247.61 268.91 46.97 147.56 550.65 659.87 431.43 348.76 254.69 306.64 280.98 633.34 419.94 300.05 34 ER12a ExonRegion 0 50.88 53.87 297.92 129.40 50.65 84.41 50.70 200.01 310.56 228.19 407.66 80.71 131.56 438.16 395.58 416.04 368.76 293.36 208.09 193.27 740.78 303.73 304.00 35 E12a_E13a KnownJunction 0 44.90 54.33 223.29 115.70 37.44 62.98 61.21 126.22 242.07 177.42 263.65 68.72 109.08 306.14 304.10 412.28 216.55 274.67 192.01 147.39 548.95 241.81 328.56 36 ER13a ExonRegion 0 74.06 71.18 231.70 97.04 31.36 69.63 34.06 148.03 236.11 155.45 317.31 109.19 137.43 359.90 339.67 375.09 268.71 296.21 175.92 177.36 576.15 252.46 269.31 37 E13a_E14a KnownJunction 0 126.24 54.79 239.35 86.34 19.27 84.27 52.11 172.06 249.74 136.97 313.71 72.92 92.85 347.46 349.71 392.03 258.34 303.56 135.16 204.02 593.00 216.83 307.56 38 ER14a ExonRegion 0 46.10 37.94 166.75 42.37 24.89 58.44 32.65 111.27 182.77 120.87 253.89 60.47 61.08 298.55 290.15 282.09 187.00 196.90 128.14 122.44 486.32 182.06 235.12 39 E14_Ab KnownBoundary 1 59.64 56.70 251.71 71.39 20.20 54.91 41.60 142.57 239.15 147.04 297.97 18.76 69.80 274.77 245.01 359.65 167.74 324.33 141.27 132.76 522.08 211.75 257.54 40 ER14b ExonRegion 1 47.17 42.12 217.22 53.97 32.11 64.26 44.93 115.15 199.70 130.44 274.47 25.30 49.92 306.71 233.20 389.28 197.39 273.10 143.48 133.99 501.66 210.67 235.26 41 E14a_E15a KnownJunction 1 96.83 54.92 226.84 69.62 43.80 87.79 57.85 121.78 206.19 131.22 239.43 22.96 60.55 344.87 275.67 351.96 201.31 265.72 154.55 145.54 427.07 238.08 234.24 42 ER15a ExonRegion 0 50.13 38.47 176.70 42.47 46.02 59.71 27.76 100.09 160.26 117.64 188.36 39.37 41.45 290.21 246.66 278.35 160.68 174.37 135.57 111.21 455.09 195.72 227.96 43 E15a_E16a KnownJunction 0 0.00 20.59 34.33 24.21 4.16 53.83 1.77 76.44 169.47 30.86 2.68 0.00 6.17 0.00 0.00 0.00 0.00 78.43 4.33 71.72 0.00 0.00 0.00 44 E15a_E17a KnownJunction 0 34.60 15.06 226.78 57.44 42.36 45.14 20.67 63.71 37.70 122.11 168.57 37.36 81.98 396.85 352.43 334.95 216.18 100.61 144.19 85.01 474.45 307.33 272.39 45 ER16a ExonRegion 0 1.54 26.22 73.73 30.60 8.59 76.94 6.80 91.71 170.20 44.82 0.88 2.76 0.57 1.99 2.02 0.32 0.05 65.04 36.58 86.75 13.39 5.02 12.46 46 E16a_E17a KnownJunction 0 7.56 41.77 134.26 55.80 12.82 169.28 16.96 162.98 219.38 71.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 84.32 88.47 137.93 14.39 5.39 32.61 47 ER17a ExonRegion 1 51.35 47.45 306.56 78.76 41.64 145.45 46.87 195.28 288.50 191.98 259.75 26.43 63.27 354.66 257.80 288.14 230.72 162.15 118.19 187.42 556.46 196.91 221.02 48 E17a_E18a KnownJunction 1 121.87 89.06 317.29 68.72 68.42 147.30 63.24 220.61 363.10 186.56 428.53 29.56 34.25 384.02 240.31 230.79 279.20 220.08 88.76 195.84 725.58 188.91 245.25 49 ER18a ExonRegion 1 88.74 63.53 375.78 100.98 63.83 121.69 59.95 245.19 389.91 225.88 358.01 65.25 43.40 333.59 305.33 427.77 247.37 319.02 181.76 183.93 641.17 273.77 296.07 50 E18a_E19a KnownJunction 0 126.24 70.65 570.74 188.15 70.03 144.92 46.06 351.31 461.66 317.16 297.44 72.92 84.09 280.12 277.15 456.38 255.35 380.00 279.54 255.22 684.25 368.38 328.90 51 ER19a ExonRegion 0 123.35 82.38 467.18 145.98 101.53 169.14 58.33 290.23 409.73 273.55 429.43 96.16 97.66 478.81 430.77 463.98 361.74 316.93 295.42 242.53 790.42 369.64 454.23 52 E19_Da NovelBoundary 0 3.63 0.00 4.32 3.30 27.42 2.50 6.05 3.33 15.74 5.13 10.21 0.00 6.66 7.36 5.19 27.86 4.39 18.12 0.00 7.54 11.80 0.00 26.55 53 E19a_E20a KnownJunction 0 68.31 55.38 404.07 100.99 83.11 120.50 38.86 211.00 363.42 219.62 317.24 93.63 46.75 350.58 374.31 243.18 240.58 210.38 130.73 146.31 670.41 285.10 245.85 54 E19b_E20b KnownJunction 0 3.33 0.00 0.00 1.76 0.00 0.00 0.00 0.00 0.00 1.64 10.37 0.00 0.00 9.24 0.00 0.00 7.29 2.57 4.71 7.48 4.82 2.39 0.00 55 ER19b ExonRegion 0 3.17 0.00 2.45 1.36 0.00 0.00 1.99 0.86 2.47 1.15 5.80 0.00 0.00 5.68 2.90 0.00 0.00 3.70 3.19 1.06 3.31 2.08 0.00 56 ER20a ExonRegion 0 49.39 47.45 360.26 78.14 74.03 116.75 32.66 206.26 321.54 206.83 293.80 77.93 45.34 334.03 329.78 202.10 194.75 176.15 108.30 134.75 608.96 217.38 241.78 57 ER20b ExonRegion 0 120.36 65.18 347.11 103.55 51.77 123.58 38.68 211.90 286.87 202.89 237.92 65.73 63.49 338.93 315.11 345.77 229.84 259.95 178.35 163.76 535.32 293.28 289.68 58 E20a_E21a KnownJunction 0 339.10 120.11 460.42 150.53 58.32 199.32 33.96 241.27 336.43 238.21 210.11 57.47 75.81 378.60 291.37 383.49 244.60 303.56 241.32 177.43 544.38 291.53 361.43 59 ER21a ExonRegion 0 145.10 94.26 345.77 114.39 86.74 145.89 54.94 217.65 299.20 200.68 260.46 61.39 89.47 357.78 383.49 341.79 231.77 216.74 198.42 153.94 560.44 253.51 306.44 60 E21a_E22a KnownJunction 0 149.06 124.45 397.80 159.75 124.70 174.73 77.02 259.83 345.83 242.05 296.39 68.57 78.73 322.92 362.82 402.54 258.81 276.08 204.71 201.91 554.02 305.13 335.14 61 E22_Aa NovelBoundary 0 50.01 3.35 7.51 3.90 8.66 17.21 10.69 7.43 22.31 4.49 7.90 0.00 0.00 17.25 4.45 24.35 9.54 14.80 0.00 9.33 13.53 5.57 26.89 62 ER22a ExonRegion 0 175.82 146.68 344.03 164.58 90.02 168.13 94.49 256.45 363.76 222.07 325.91 83.81 82.48 365.68 411.15 470.49 304.39 271.04 216.74 162.64 655.95 311.28 354.03 63 E22a_E23a KnownJunction 1 265.45 177.40 432.27 233.24 116.98 202.33 113.85 298.69 457.69 239.58 390.05 85.68 53.08 361.29 446.88 603.43 234.78 329.55 303.35 200.51 670.10 355.64 475.47 64 ER23a ExonRegion 0 185.75 133.51 408.18 155.08 77.78 120.60 56.18 260.86 378.13 219.92 314.72 72.70 63.78 308.61 425.26 356.04 289.72 238.41 214.95 160.17 624.01 273.94 301.97 65 E23a_E24a KnownJunction 0 110.76 98.67 325.30 129.52 70.46 67.63 36.83 227.80 308.59 180.38 237.80 80.13 53.41 389.37 575.07 351.10 210.75 170.83 164.52 131.48 471.67 322.09 272.56 66 I23 Intron 0 30.39 10.93 38.54 19.01 18.89 17.34 12.24 28.08 32.58 17.83 18.25 8.98 5.63 13.78 17.00 19.93 13.82 26.02 19.02 7.66 16.10 23.94 19.34 67 I23_SR1 SilentIntronRegion 0 27.82 9.47 43.32 20.42 14.02 17.36 10.07 33.92 39.35 23.80 18.38 4.91 3.13 14.66 20.73 19.91 19.19 30.55 21.76 9.45 19.48 26.50 20.57 68 I23_AR1 ActiveIntronRegion 0 42.11 12.49 42.46 23.11 26.89 20.60 17.86 25.71 34.76 15.63 25.24 14.51 10.47 15.99 11.63 22.33 11.33 21.86 16.46 6.66 12.87 26.29 18.65 69 I23_AR2 ActiveIntronRegion 0 19.45 13.08 18.35 8.27 20.65 12.32 9.64 15.18 9.40 4.00 6.63 12.05 5.32 7.84 15.37 16.51 2.27 19.90 15.67 4.20 11.70 12.84 17.38 70 E24_Aa NovelBoundary 0 16.52 23.09 102.60 37.19 11.38 22.26 10.64 68.96 94.15 57.57 37.80 0.00 7.95 14.54 32.63 57.68 18.33 44.89 4.52 21.48 38.55 37.78 47.89 71 ER24a ExonRegion 1 120.76 74.74 229.45 91.22 57.00 68.92 33.43 166.72 221.81 138.34 170.30 37.65 21.28 195.74 266.22 209.20 142.94 92.79 119.38 95.66 358.74 202.30 162.75