Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ZNF701 Gene 0 35.83 22.97 13.41 15.52 28.50 17.00 23.07 16.93 23.68 19.97 38.60 53.73 31.45 28.50 24.88 33.76 30.66 12.94 13.64 24.57 13.82 24.74 16.95 2 301093 Transcript 0 23.75 3.16 1.18 2.19 3.06 8.19 9.91 2.15 3.47 0.98 8.70 0.00 2.93 13.59 5.96 20.59 10.58 1.01 8.59 10.51 10.33 7.14 14.00 3 391786 Transcript 0 6.70 2.79 0.81 1.48 2.70 2.20 3.36 0.15 0.68 0.93 4.40 1.84 3.73 2.13 4.41 1.92 4.92 1.32 1.99 4.89 3.29 0.53 3.27 4 391780 Transcript 0 1.47 0.80 16.14 1.42 0.00 1.67 2.94 0.38 22.88 12.32 0.00 0.00 0.00 0.00 0.00 2.33 0.29 10.60 0.97 2.68 0.86 2.81 5.11 5 391785 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 ER1a ExonRegion 0 47.51 6.32 2.36 4.38 6.12 16.37 19.81 4.29 6.95 1.97 17.40 0.00 5.86 27.18 11.92 41.19 21.16 2.01 17.18 21.01 20.66 14.29 28.00 7 E1a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 E2_Aa NovelBoundary 0 9.85 6.05 1.21 0.00 0.00 0.00 6.76 2.22 2.89 3.38 0.00 0.00 7.47 5.42 0.00 0.00 12.25 4.15 4.80 6.20 5.93 0.00 6.83 9 ER2a ExonRegion 0 9.68 2.33 2.51 2.79 5.51 0.84 2.42 0.59 1.26 1.95 1.77 0.00 1.07 1.49 3.01 4.08 5.28 2.73 2.91 1.47 2.52 0.48 2.69 10 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 Ix_AR1 ActiveIntronRegion 0 11.49 2.39 12.15 9.12 6.95 1.30 5.94 6.08 6.08 4.48 1.37 1.68 1.02 0.90 4.69 1.40 3.13 3.47 8.27 2.52 2.56 0.51 1.39 12 E3_Aa NovelBoundary 1 865.93 824.66 303.09 360.59 1004.08 496.82 971.98 331.02 251.47 276.17 313.87 214.27 249.33 131.62 295.20 783.47 630.39 483.76 597.19 802.80 399.95 271.51 634.16 13 ER3a ExonRegion 0 10.91 8.83 0.74 1.61 5.29 7.97 11.00 0.00 1.46 0.23 8.83 7.35 13.85 7.04 10.17 3.62 14.38 2.55 5.04 15.32 7.48 1.65 10.38 14 E3_Da NovelBoundary 0 7.48 3.35 11.56 2.06 8.23 2.21 1.77 2.55 4.14 3.20 14.74 6.30 0.00 2.47 10.75 7.95 4.77 1.82 9.60 3.26 8.90 8.88 3.67 15 E3a_E4a KnownJunction 0 6.22 0.00 0.00 1.53 0.00 0.00 0.00 0.00 0.00 1.53 7.00 0.00 0.00 0.00 4.45 0.00 0.00 0.00 0.00 2.75 3.15 0.00 0.00 16 Ix_AR1 ActiveIntronRegion 0 14.14 3.22 10.28 3.57 6.59 4.84 4.89 1.81 3.88 4.20 6.80 9.54 11.16 2.32 5.91 5.23 6.97 4.36 6.16 4.86 6.20 3.66 9.30 17 ER4a ExonRegion 0 38.12 11.56 5.14 5.91 14.03 10.00 16.93 16.22 19.14 9.64 36.28 3.68 10.69 19.75 15.45 36.15 26.64 10.83 15.48 22.59 28.44 14.68 17.28 18 E4a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13.84 6.11 0.00 19.79 6.30 6.82 2.47 20.15 0.00 0.00 1.95 8.66 11.76 0.00 2.88 0.00 19 ER5a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20 ER6a ExonRegion 0 9.50 8.04 24.29 8.67 10.45 7.02 9.73 16.43 46.42 27.54 44.23 10.23 20.20 37.41 18.85 48.84 34.15 26.68 19.44 34.93 34.57 26.17 34.92 21 E6a_E7a KnownJunction 0 11.34 0.00 3.28 8.92 19.35 2.90 6.09 18.61 29.63 31.91 25.69 18.01 46.75 23.84 22.25 34.01 16.08 24.62 35.86 24.67 14.33 11.39 41.49 22 E6_Db NovelBoundary 0 35.19 40.72 57.39 63.00 50.85 58.94 40.32 66.79 72.66 40.96 22.32 6.30 19.48 14.30 31.40 24.95 13.93 62.43 68.05 36.62 27.86 46.11 44.90 23 ER6b ExonRegion 0 1.47 0.80 16.14 1.42 0.00 1.67 2.94 0.38 22.88 12.32 0.00 0.00 0.00 0.00 0.00 2.33 0.29 10.60 0.97 2.68 0.86 2.81 5.11 24 ER7a ExonRegion 0 33.06 15.93 14.03 15.12 37.53 19.78 23.97 22.09 33.70 25.74 52.21 64.84 35.97 32.26 27.23 47.14 44.33 17.94 19.79 32.16 18.04 23.49 17.76 25 E7_Da KnownBoundary 0 109.87 71.11 45.83 54.17 121.05 52.70 74.46 56.31 109.26 52.81 143.98 170.01 115.74 71.63 27.57 126.80 168.86 52.89 61.55 94.41 48.68 70.91 92.70 26 ER7b ExonRegion 0 41.73 28.67 15.12 18.81 33.39 19.79 27.01 19.42 25.26 22.67 42.97 66.51 37.30 32.15 28.90 35.98 32.92 13.54 14.09 26.28 13.07 29.46 17.54 27 IG24_AR1 ActiveIntergenicRegion 0 8.25 5.63 10.33 6.13 4.74 11.13 5.99 9.17 6.08 8.32 12.57 6.47 13.09 9.96 14.04 16.05 6.86 8.85 9.74 8.33 8.06 6.86 7.64 28 IG24_AR2 ActiveIntergenicRegion 0 8.22 5.18 7.81 5.47 10.85 3.75 6.54 5.33 6.90 7.92 7.28 5.94 1.53 8.89 11.39 10.72 3.87 7.49 5.83 4.86 2.60 6.26 6.11