Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 TMEM143 Gene 0 28.24 12.60 22.30 19.68 17.01 10.66 6.86 23.80 32.23 29.50 57.46 29.95 25.71 53.83 62.57 47.23 36.45 30.50 21.18 23.93 44.84 14.18 19.26 2 293261 Transcript 0 43.64 26.84 15.97 13.92 8.40 6.64 8.30 18.61 28.50 25.04 46.54 36.01 25.32 47.38 87.77 41.95 13.84 27.28 15.53 13.87 44.42 13.96 10.07 3 435956 Transcript 0 3.19 0.00 4.88 4.13 0.00 0.00 4.50 0.00 5.35 9.35 11.79 0.00 6.82 21.96 10.14 7.86 13.65 15.67 20.61 5.94 2.66 2.45 15.11 4 436660 Transcript 0 0.00 3.35 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.65 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 377431 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 ER1a ExonRegion 0 40.31 21.38 4.82 6.12 16.30 14.20 6.99 2.73 8.53 12.64 37.85 2.82 0.98 34.33 41.63 48.52 29.86 18.69 19.26 9.35 18.09 7.80 28.07 7 E1a_E2a KnownJunction 1 113.50 64.86 8.78 12.22 46.01 37.08 17.97 8.95 17.25 29.66 86.50 0.00 0.00 76.29 74.05 103.82 70.41 36.89 46.59 22.05 40.22 21.62 67.86 8 ER2a ExonRegion 0 14.76 6.07 9.42 9.07 7.62 4.19 3.42 10.63 22.68 20.22 41.19 12.41 11.64 44.58 45.22 44.30 33.41 33.77 26.62 16.53 32.49 11.24 21.56 9 E2a_E3a KnownJunction 0 6.52 9.01 5.32 8.19 11.88 0.00 5.52 16.72 14.24 10.99 37.22 18.46 6.82 26.02 16.19 35.55 22.16 39.34 27.95 12.14 23.10 6.12 23.13 10 E2a_E4a KnownJunction 0 3.19 0.00 4.88 4.13 0.00 0.00 4.50 0.00 5.35 9.35 11.79 0.00 6.82 21.96 10.14 7.86 13.65 15.67 20.61 5.94 2.66 2.45 15.11 11 E2a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 ER3a ExonRegion 0 12.56 19.23 15.77 12.49 13.10 15.39 10.18 18.95 26.23 23.72 37.50 23.05 21.66 31.17 44.90 27.88 25.97 36.46 26.06 18.44 40.09 7.12 14.40 13 E3a_E4a KnownJunction 0 43.64 26.84 15.97 13.92 8.40 6.64 8.30 18.61 28.50 25.04 46.54 36.01 25.32 47.38 87.77 41.95 13.84 27.28 15.53 13.87 44.42 13.96 10.07 14 E3a_E5a KnownJunction 0 0.00 3.35 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.65 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 ER4a ExonRegion 0 22.68 6.72 9.97 12.94 15.30 7.22 5.55 12.84 25.66 33.48 40.87 28.35 15.18 51.89 51.37 45.13 21.94 33.39 16.40 22.71 51.52 10.71 9.55 16 E4a_E5a KnownJunction 0 24.08 3.29 15.76 19.91 23.85 7.84 2.25 14.87 30.70 32.02 40.43 6.30 6.82 47.97 43.64 31.79 20.38 26.41 29.46 23.97 53.87 13.96 10.76 17 ER5a ExonRegion 0 22.12 5.26 15.13 13.41 14.03 1.72 4.81 18.27 16.95 28.19 37.51 14.08 11.24 50.65 37.98 48.46 26.36 25.16 23.83 24.98 32.82 9.13 10.24 18 E5_Da NovelBoundary 0 23.41 0.00 6.89 6.73 3.90 2.61 1.90 2.18 7.26 8.41 4.63 0.00 0.00 21.90 0.00 16.06 4.21 8.75 0.00 12.14 11.18 3.00 0.00 19 E5a_E6a KnownJunction 0 0.00 9.27 5.20 3.40 7.72 8.06 12.98 12.94 11.28 14.96 28.38 6.30 0.00 14.24 26.58 22.99 25.34 6.30 8.56 13.74 31.63 3.12 3.67 20 I5 Intron 0 9.98 2.85 5.35 4.66 6.14 3.97 4.73 5.25 10.09 10.02 10.84 5.39 8.58 13.26 18.39 16.67 8.00 13.71 9.34 9.22 9.55 5.58 5.99 21 I5_AR1 ActiveIntronRegion 0 10.03 2.87 5.38 4.68 6.16 3.99 4.75 5.28 10.14 10.07 10.90 5.42 8.63 13.33 18.48 16.76 8.03 13.77 9.39 9.27 9.60 5.61 6.02 22 E6_Aa NovelBoundary 0 40.01 0.00 15.79 9.12 20.80 2.78 5.70 6.49 22.71 15.53 21.79 0.00 8.12 25.84 29.79 25.72 26.09 25.99 15.81 8.95 22.92 12.37 27.74 23 ER6a ExonRegion 0 15.54 6.26 14.60 12.09 8.42 7.32 6.78 13.88 25.25 16.91 53.64 18.85 9.85 53.79 61.91 43.19 34.07 27.71 13.69 22.61 46.99 17.99 16.91 24 E6a_E7a KnownJunction 0 6.67 3.35 16.62 6.03 7.39 0.00 6.23 13.47 15.22 10.72 46.80 5.40 0.00 46.03 28.43 30.93 26.93 24.42 0.00 18.86 43.61 10.96 3.50 25 ER7a ExonRegion 0 27.90 11.36 18.39 16.25 8.66 6.16 6.08 24.49 21.92 19.81 54.19 19.55 12.74 59.28 50.05 30.07 19.01 29.45 9.22 25.01 42.36 14.47 15.19 26 E7_Da NovelBoundary 0 14.97 0.00 5.97 4.26 12.05 0.00 0.00 4.68 3.27 9.32 11.95 0.00 0.00 10.18 13.35 16.75 8.70 4.68 0.00 3.26 2.66 0.00 3.50 27 E7a_E8a KnownJunction 0 22.30 3.22 12.09 10.22 12.56 8.69 0.00 19.88 25.81 11.20 34.80 18.76 6.82 38.26 45.74 23.84 20.94 20.69 13.55 11.12 25.76 11.02 11.69 28 I7 Intron 0 6.39 3.25 11.52 6.13 6.89 1.79 0.82 5.95 7.69 12.30 12.02 6.28 5.91 13.02 21.65 20.60 11.44 6.61 5.38 3.78 13.30 0.37 8.87 29 I7_AR1 ActiveIntronRegion 0 6.42 3.26 11.56 6.15 6.92 1.80 0.83 5.97 7.71 12.34 12.06 6.30 5.93 13.07 21.73 20.67 11.48 6.64 5.40 3.79 13.35 0.37 8.90 30 E8_Aa NovelBoundary 0 17.19 6.45 2.34 1.63 8.15 0.00 4.33 7.19 11.05 9.80 2.68 6.00 19.48 7.42 9.39 8.03 3.93 11.11 8.56 2.88 5.68 0.00 4.27 31 ER8a ExonRegion 0 37.40 16.89 32.31 27.85 23.89 14.88 7.95 33.17 42.57 37.24 70.81 42.57 40.30 58.67 76.39 54.01 45.96 30.69 24.16 26.94 49.26 15.98 23.05 32 IG2_AR1 ActiveIntergenicRegion 0 2.12 5.42 6.13 2.73 8.03 2.45 0.00 1.73 2.47 2.29 1.93 3.61 0.00 0.00 0.00 0.00 0.00 0.00 6.37 3.55 1.84 0.00 17.62