Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PRR12 Gene 0 33.43 33.73 74.55 47.75 30.47 42.73 24.93 90.89 123.89 146.82 103.42 24.32 36.80 107.38 96.49 77.78 95.86 155.60 110.13 95.04 105.25 54.94 68.32 2 418929 Transcript 0 23.28 7.87 31.79 19.26 12.72 24.66 19.18 51.47 85.46 101.32 116.96 24.73 48.53 99.22 81.62 60.83 112.66 139.21 117.75 87.24 115.22 51.03 65.90 3 246798 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 314734 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 ER1a ExonRegion 0 5.98 9.48 10.32 4.45 4.54 5.97 7.73 7.11 18.53 18.82 51.02 12.69 28.79 45.36 46.35 23.64 52.85 36.74 63.67 33.10 60.35 22.34 19.81 6 E1a_E2a KnownJunction 0 36.60 0.00 24.93 8.36 11.04 4.83 14.22 41.16 63.11 61.68 111.61 6.30 38.31 74.05 78.25 47.17 108.56 107.74 80.94 31.58 95.14 44.95 48.66 7 I1_AR1 ActiveIntronRegion 0 13.77 1.76 11.65 0.00 2.71 0.68 4.26 11.68 9.36 34.20 7.45 2.61 7.97 0.39 7.03 4.83 7.60 7.57 27.48 20.92 5.76 1.76 4.49 8 ER2a ExonRegion 0 21.95 2.16 24.41 10.59 8.69 19.12 10.74 49.65 83.04 105.33 124.44 31.30 53.13 80.13 65.57 55.63 118.86 100.51 95.56 85.75 123.70 39.38 60.89 9 E2a_E3a KnownJunction 0 38.23 6.51 54.88 28.93 16.47 46.22 30.74 81.66 123.67 152.41 149.56 31.06 66.88 149.74 73.06 114.93 158.67 239.60 289.23 165.23 202.26 99.87 107.64 10 E3_Aa NovelBoundary 0 18.60 3.22 0.00 2.06 0.00 8.52 6.58 2.05 1.19 2.77 4.95 0.00 6.82 0.00 4.33 0.00 0.00 2.53 9.41 3.26 0.00 0.00 0.00 11 ER3a ExonRegion 0 31.89 14.64 38.91 28.53 14.88 31.17 18.93 77.63 116.46 134.31 139.56 36.40 71.31 149.42 113.08 91.13 143.51 227.30 139.29 118.48 160.59 69.81 88.72 12 E3a_E4a KnownJunction 1 22.08 8.88 41.99 43.55 23.26 41.45 41.25 66.21 134.14 151.26 187.73 43.51 74.18 107.48 128.93 44.18 161.85 175.80 96.66 118.76 112.81 58.54 100.39 13 ER4a ExonRegion 0 11.62 6.13 21.29 12.46 8.38 20.17 11.28 36.68 59.36 77.28 80.98 22.43 39.47 84.68 66.88 39.97 72.38 95.67 74.29 63.43 77.69 27.36 40.79 14 E4_Ab KnownBoundary 1 24.75 2.57 9.73 15.95 4.33 7.21 8.70 27.93 40.28 88.03 42.59 0.00 0.00 70.34 18.05 63.49 38.62 54.35 58.92 56.25 48.93 16.23 56.08 15 ER4b ExonRegion 0 7.68 5.25 7.77 3.54 3.37 6.39 6.26 18.73 21.71 54.40 26.50 5.45 0.08 45.40 49.51 23.87 19.81 31.50 53.12 29.44 30.03 15.69 39.46 16 E4_Da KnownBoundary 0 17.93 19.93 9.37 2.96 0.00 12.83 10.91 21.85 34.69 37.74 32.48 0.00 0.00 66.22 45.24 29.39 20.38 34.36 25.13 45.76 30.46 11.94 15.45 17 E4a_E4c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 ER4c ExonRegion 0 17.88 15.16 37.60 17.18 14.47 28.38 18.54 51.63 85.36 109.51 90.78 14.15 16.16 102.90 80.86 70.00 84.63 130.34 102.38 81.60 89.22 45.99 60.35 19 E4_Ac KnownBoundary 1 6.67 15.39 20.16 8.92 4.33 13.00 15.10 31.13 40.22 59.45 15.58 18.46 12.82 30.90 14.83 15.72 57.04 55.75 58.07 21.48 17.17 19.59 12.04 20 ER4d ExonRegion 0 23.33 20.36 47.12 23.29 14.62 29.47 16.29 66.38 84.84 119.91 97.73 23.31 35.14 107.95 92.92 68.65 81.48 138.30 91.02 76.36 100.56 41.28 50.87 21 E4b_E5a KnownJunction 1 58.01 33.68 108.57 59.40 59.00 56.44 30.12 112.13 196.24 219.03 174.94 18.16 6.82 129.97 172.82 169.70 115.01 331.17 147.77 150.01 120.22 119.83 136.75 22 ER5a ExonRegion 0 48.99 37.48 112.56 71.26 40.95 59.94 30.33 159.51 223.44 264.97 195.05 48.37 70.77 159.66 144.00 133.74 178.08 296.21 176.54 151.93 173.50 101.36 119.15 23 E5a_E6a KnownJunction 0 131.58 73.61 93.67 71.02 99.41 114.08 44.69 165.57 219.82 236.33 220.32 53.42 121.58 151.80 158.48 188.33 194.95 352.15 320.20 212.40 151.73 167.41 195.14 24 E6_Aa NovelBoundary 0 32.08 11.97 10.59 1.86 17.32 5.62 25.44 18.20 5.96 8.97 7.42 0.00 0.00 9.89 13.35 21.28 18.42 2.57 8.75 0.00 6.30 6.06 23.56 25 ER6a ExonRegion 0 29.66 41.71 41.55 22.88 27.53 31.37 18.81 49.60 65.86 87.50 75.34 13.27 25.21 80.68 78.79 41.97 65.85 93.10 60.98 68.35 75.51 36.70 52.72 26 E6a_E7a KnownJunction 0 79.35 199.04 134.44 84.90 88.62 128.39 84.66 178.01 224.13 247.91 173.46 18.31 27.27 154.57 112.24 115.95 168.40 290.96 165.56 142.92 142.27 98.46 147.59 27 E7_Aa NovelBoundary 0 78.98 5.53 11.89 10.09 7.72 5.51 2.25 13.18 4.98 8.70 2.47 0.00 0.00 0.00 5.81 8.63 4.11 19.11 4.80 8.82 3.09 3.12 16.65 28 ER7a ExonRegion 0 37.27 71.07 136.83 85.64 96.92 114.79 69.54 170.01 229.70 267.53 129.19 25.87 52.03 137.20 125.65 109.56 139.99 206.22 125.02 168.21 133.92 86.56 109.51 29 E7_Da NovelBoundary 0 16.82 6.38 3.64 5.69 25.30 2.73 4.24 10.23 3.39 16.36 2.26 0.00 0.00 0.00 0.00 4.27 4.58 17.53 0.00 11.82 14.64 0.00 3.84 30 E7a_E8a KnownJunction 1 17.71 45.72 198.13 122.23 87.86 120.16 43.10 270.97 348.12 341.36 160.15 37.81 144.47 175.41 143.89 174.31 123.80 162.75 169.23 200.44 100.51 154.31 107.64 31 I7 Intron 0 10.51 1.38 1.65 4.58 4.83 2.48 1.49 4.07 4.15 6.17 1.31 0.00 0.00 2.67 6.12 0.67 5.21 9.54 2.16 3.84 5.47 1.41 3.31 32 I7_SR1 SilentIntronRegion 0 10.60 1.39 1.66 4.62 4.85 2.51 1.51 4.11 4.19 6.23 1.32 0.00 0.00 2.70 6.18 0.68 5.26 9.63 2.16 3.87 5.51 1.42 3.34 33 E8_Aa NovelBoundary 0 31.64 0.00 6.83 4.53 12.22 20.78 7.86 15.48 20.60 11.52 0.00 0.00 0.00 9.71 21.63 14.61 7.67 16.95 8.19 15.66 5.25 8.33 0.00 34 ER8a ExonRegion 0 52.66 77.32 190.64 117.73 92.53 89.83 54.71 236.36 300.51 309.77 170.63 48.95 75.32 173.22 151.56 175.89 149.43 272.20 233.72 182.55 161.31 122.34 149.00 35 E8_Da NovelBoundary 0 6.45 10.06 2.72 5.53 3.82 8.12 16.38 8.21 8.33 13.11 0.00 0.00 13.15 2.47 10.75 4.27 4.77 21.35 3.67 8.56 9.02 5.51 6.83 36 E8a_E9a KnownJunction 0 55.42 93.08 185.95 108.74 59.76 87.22 54.28 257.12 348.55 304.32 164.57 66.17 60.22 160.22 92.47 109.71 134.46 265.76 161.98 134.35 139.12 78.87 92.62 37 ER9a ExonRegion 0 70.67 89.09 139.10 94.96 61.21 91.15 53.40 140.38 191.43 198.81 111.13 28.73 43.74 128.92 126.96 105.11 108.99 199.31 142.67 136.67 125.20 78.51 88.36 38 E9a_E10a KnownJunction 0 89.42 95.51 202.00 122.56 73.85 65.08 33.48 149.96 217.16 205.92 65.17 25.81 6.49 129.14 132.64 112.11 122.95 263.89 127.25 145.86 133.19 59.58 92.70 39 ER10a ExonRegion 0 97.41 117.11 210.67 134.29 73.82 87.99 56.83 185.23 229.51 238.16 141.07 37.32 36.37 165.14 134.08 117.00 141.78 286.03 150.75 156.86 171.26 79.02 116.35 40 E10a_E11a KnownJunction 0 105.35 134.84 284.23 167.71 90.66 90.91 46.55 221.27 261.80 282.00 144.35 38.26 79.54 172.88 213.49 149.62 116.50 296.64 254.60 219.36 179.34 93.07 156.73 41 E10a_E12b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 42 ER11a ExonRegion 0 72.35 72.86 203.86 151.25 70.61 76.63 39.81 194.10 267.11 270.80 144.51 32.21 49.25 180.23 149.62 136.29 148.14 240.66 115.71 183.00 142.72 87.57 111.92 43 E11a_E12a KnownJunction 0 71.86 53.02 278.67 225.85 76.57 65.36 35.77 239.83 313.63 326.75 171.15 37.21 40.58 241.10 176.53 138.51 127.82 214.40 125.18 172.13 112.56 122.22 103.80 44 I11 Intron 0 11.01 4.36 7.66 10.10 11.96 2.34 7.13 10.57 7.64 8.26 2.82 2.02 2.06 2.65 8.53 7.73 3.92 9.10 8.43 5.14 5.43 1.14 3.75 45 I11_SR1 SilentIntronRegion 0 11.06 4.38 7.70 10.14 12.01 2.35 7.16 10.62 7.67 8.30 2.83 2.03 2.07 2.66 8.56 7.76 3.93 9.14 8.47 5.17 5.45 1.15 3.77 46 E12_Aa NovelBoundary 0 33.71 11.45 15.40 16.68 7.13 5.79 2.12 12.40 6.66 13.14 0.00 0.00 0.00 0.00 13.35 4.36 0.00 22.22 9.60 9.46 15.01 0.00 0.00 47 ER12a ExonRegion 0 76.91 60.43 246.91 157.93 54.57 82.86 47.77 227.65 259.29 308.90 151.66 40.31 36.53 171.98 165.64 101.88 132.78 259.69 130.33 159.73 149.15 72.63 97.50 48 E12a_E13a KnownJunction 0 151.36 100.97 254.13 217.39 121.65 90.97 73.84 287.76 385.01 338.46 171.83 49.22 71.75 224.21 161.94 186.45 165.59 419.92 271.07 185.94 170.13 139.73 146.06 49 ER12b ExonRegion 0 96.38 88.82 231.11 179.07 66.22 89.33 49.27 251.86 309.40 299.96 150.84 24.89 57.12 175.58 161.43 137.35 128.26 370.08 171.78 172.64 169.45 94.06 118.83 50 E13_Aa NovelBoundary 0 14.52 2.96 11.12 1.53 0.00 2.90 0.00 11.25 5.21 5.51 2.11 0.00 0.00 2.24 8.90 0.00 13.74 13.47 0.00 0.00 2.35 0.00 0.00 51 ER13a ExonRegion 0 124.92 136.84 263.75 209.36 87.74 92.57 79.08 275.89 353.08 367.09 180.85 34.46 56.08 225.80 215.63 213.99 176.22 417.88 303.47 200.31 196.47 136.30 156.50 52 E13a_E14a KnownJunction 0 104.69 145.04 235.92 150.53 80.90 118.62 93.49 217.28 252.43 251.64 127.03 25.06 46.43 145.04 140.68 55.97 100.51 194.00 89.70 163.63 166.30 85.48 55.74 53 ER14a ExonRegion 0 31.40 34.93 81.07 63.68 41.40 40.75 21.74 91.69 112.10 123.47 56.64 17.07 26.66 54.12 71.77 57.27 59.01 90.79 90.36 62.88 69.66 44.95 48.44