Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 KPTN Gene 0 25.00 29.25 64.99 47.25 27.00 66.54 9.80 66.46 91.20 98.42 25.23 5.29 5.63 36.91 55.75 39.60 31.02 92.74 54.95 63.51 48.32 17.44 22.45 2 338134 Transcript 0 35.39 34.18 78.68 56.41 36.67 77.15 11.80 74.51 104.34 115.07 26.73 6.30 7.95 42.33 60.91 44.97 35.37 114.81 59.92 71.88 54.11 17.51 23.57 3 ER1a ExonRegion 0 9.18 9.32 26.07 14.85 15.77 40.35 3.61 36.57 52.01 65.19 26.59 7.48 2.81 26.09 28.66 44.28 27.57 64.81 62.58 41.29 37.01 13.35 28.36 4 E1a_E2a KnownJunction 1 9.41 16.71 53.55 59.53 55.26 64.17 6.36 68.27 120.34 134.93 23.53 7.65 0.00 31.49 38.07 116.89 39.64 247.56 134.78 55.80 40.96 23.39 70.08 5 E1a_E4a NovelJunction 0 0.00 3.35 1.69 2.06 0.00 2.90 2.25 17.46 7.58 6.98 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10.24 0.00 0.00 0.00 3.12 0.00 6 ER2a ExonRegion 0 16.65 20.29 44.94 50.67 50.71 69.97 8.98 58.52 107.14 116.46 37.33 6.36 3.33 30.43 43.20 70.90 33.25 146.97 94.56 46.71 50.58 9.54 31.74 7 E2_Da NovelBoundary 0 0.00 12.10 6.06 11.35 8.66 31.35 6.32 7.48 11.20 4.78 4.84 0.00 0.00 0.00 4.45 4.36 4.21 18.90 4.14 6.52 0.00 0.00 0.00 8 E2a_E3a KnownJunction 0 61.94 47.16 66.08 38.99 79.46 134.87 18.15 46.87 114.76 123.75 50.80 11.70 19.32 31.96 42.90 52.12 48.90 82.91 72.57 64.30 50.41 11.94 12.46 9 I2 Intron 0 0.00 1.70 0.00 1.70 0.00 7.67 1.66 5.38 2.31 2.86 1.62 0.00 0.00 0.00 3.07 1.24 1.38 6.53 13.32 3.56 0.92 0.87 1.23 10 I2_SR1 SilentIntronRegion 0 0.00 1.74 0.00 1.74 0.00 7.86 1.70 5.52 2.37 2.92 1.66 0.00 0.00 0.00 3.15 1.27 1.41 6.69 13.65 3.65 0.94 0.89 1.26 11 ER3a ExonRegion 0 21.04 33.40 73.97 45.73 38.56 114.95 9.25 61.61 93.83 115.27 38.91 8.91 16.22 55.16 44.88 54.41 53.51 99.34 53.51 73.82 71.56 15.17 24.91 12 E3a_E4a KnownJunction 0 23.19 17.69 71.49 51.61 14.69 54.74 1.94 61.24 97.34 116.77 27.64 17.71 33.11 50.09 26.45 68.36 36.65 105.91 29.08 64.81 64.99 19.53 30.22 13 ER4a ExonRegion 0 28.52 20.41 60.36 57.56 10.99 31.04 6.45 54.62 76.69 107.04 22.07 19.13 16.20 40.93 55.76 56.31 30.01 98.91 44.54 52.77 60.18 11.06 24.45 14 E4_Da NovelBoundary 0 3.78 0.00 2.96 10.72 15.70 14.48 0.00 14.50 53.07 34.89 13.00 0.00 6.82 12.13 9.52 4.19 16.55 31.05 20.61 2.36 20.76 3.12 3.93 15 E4a_E5a KnownJunction 0 16.74 29.99 60.05 62.90 24.36 33.45 2.25 48.71 56.54 102.61 17.43 0.00 0.00 40.85 49.32 35.29 31.60 93.64 28.52 34.20 61.90 3.00 3.33 16 I4 Intron 0 13.64 12.68 8.22 18.20 21.32 20.29 5.69 26.27 37.77 29.57 6.31 6.02 6.86 8.99 6.73 11.54 9.27 13.17 15.39 12.13 8.37 3.27 5.09 17 I4_AR1 ActiveIntronRegion 0 3.61 6.28 0.00 1.16 6.85 27.08 0.00 4.22 6.61 0.94 5.74 2.80 1.66 2.44 6.40 19.49 4.95 2.93 13.40 8.57 15.10 4.90 7.34 18 I4_SR1 SilentIntronRegion 0 8.00 6.14 5.46 9.00 11.25 14.25 3.68 12.46 24.38 22.53 4.48 3.24 7.81 4.84 4.73 12.58 7.60 7.13 15.66 7.49 6.61 2.08 4.47 19 I4_AR2 ActiveIntronRegion 0 13.29 15.03 15.73 25.82 31.07 37.08 7.06 30.06 46.66 47.85 6.98 19.48 23.45 7.94 5.16 12.71 28.06 10.68 17.34 21.39 1.10 3.01 5.22 20 I4_SR2 SilentIntronRegion 0 8.24 7.49 10.56 17.32 21.97 13.71 5.04 26.69 37.96 34.13 4.76 14.90 13.28 8.84 5.96 11.14 12.37 9.30 5.10 19.46 6.98 2.79 1.27 21 I4_AR3 ActiveIntronRegion 0 20.65 20.21 10.76 28.04 31.53 26.34 8.04 40.77 52.36 36.82 8.36 6.94 4.65 13.46 8.88 10.12 10.03 20.39 17.01 15.28 10.13 4.41 6.22 22 E5_Aa NovelBoundary 0 18.15 24.67 19.28 24.41 11.63 47.42 1.77 45.47 44.85 57.94 5.37 13.80 0.00 21.60 4.45 4.02 0.00 29.76 9.32 17.13 17.24 2.63 0.00 23 ER5a ExonRegion 0 40.80 30.16 76.18 72.72 41.12 70.79 18.27 80.67 91.98 110.37 24.21 4.10 7.53 58.51 61.31 39.22 35.14 101.29 63.79 72.40 54.95 13.30 18.74 24 E5a_E6a KnownJunction 0 58.75 37.56 99.11 67.86 67.57 85.12 15.46 99.23 131.86 134.93 21.58 11.10 6.82 80.05 76.77 42.38 37.03 140.98 53.65 81.75 62.89 14.63 23.47 25 ER6a ExonRegion 0 39.70 22.29 78.57 53.65 34.93 60.17 7.84 78.92 96.06 103.55 15.12 6.14 3.49 52.65 65.75 46.11 27.08 100.53 59.27 82.43 62.27 23.93 25.28 26 E6_Da NovelBoundary 0 21.11 12.50 37.64 42.32 32.09 37.76 7.95 58.28 53.62 51.82 4.95 12.60 6.82 23.84 23.73 20.17 4.11 28.69 12.99 14.06 12.36 11.57 0.00 27 E6a_E7a KnownJunction 0 19.86 13.88 80.78 48.65 25.21 20.56 15.32 65.92 72.83 79.70 10.11 0.00 0.00 19.25 25.96 27.69 7.20 75.94 55.15 74.59 64.00 13.53 25.69 28 I6 Intron 0 14.41 9.43 11.64 14.12 14.34 27.10 4.03 24.26 35.99 31.70 3.92 2.58 4.16 20.62 20.50 5.60 8.13 16.90 10.61 12.02 12.77 4.53 5.96 29 I6_AR1 ActiveIntronRegion 0 16.40 10.69 16.01 18.16 19.38 29.97 4.57 33.88 45.62 37.58 5.04 2.08 5.64 22.53 21.13 7.77 10.05 22.39 15.42 12.52 15.91 5.67 5.44 30 I6_SR1 SilentIntronRegion 0 11.90 7.83 5.83 8.80 7.67 23.54 3.34 11.47 23.33 24.08 2.44 3.31 2.19 18.30 19.90 2.71 5.62 9.64 4.20 11.50 8.67 3.03 6.75 31 E7_Aa NovelBoundary 0 10.59 3.35 7.98 17.18 7.98 38.56 3.89 37.99 38.69 18.64 0.00 0.00 0.00 17.19 19.04 16.75 4.77 13.93 8.85 20.26 16.49 9.19 8.54 32 ER7a ExonRegion 0 23.63 27.84 75.24 55.26 30.94 38.84 12.08 66.28 100.13 96.15 15.73 5.20 6.74 40.68 61.74 31.94 27.46 101.14 55.66 63.38 41.13 14.77 23.09 33 E7a_E8a KnownJunction 0 41.64 49.73 89.91 67.06 59.85 67.57 19.34 80.14 111.49 125.79 26.53 12.30 8.12 36.49 82.33 38.02 15.33 144.84 48.00 93.19 61.28 20.02 8.28 34 I7 Intron 0 0.00 0.00 0.00 0.00 0.00 17.81 0.80 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 35 I7_SR1 SilentIntronRegion 0 0.00 0.00 0.00 0.00 0.00 18.23 0.82 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 36 E8_Aa NovelBoundary 0 7.41 0.00 6.06 3.73 8.49 116.81 6.09 2.34 4.63 1.13 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.44 8.85 0.00 3.15 0.00 0.00 37 ER8a ExonRegion 0 31.86 28.70 89.37 56.25 27.51 66.32 11.41 89.39 103.20 119.23 21.63 2.00 5.83 45.08 78.30 40.89 31.49 144.27 59.83 106.27 48.06 19.23 11.93 38 E8a_E9a KnownJunction 0 71.49 42.36 87.08 54.90 41.77 62.86 14.00 61.90 107.32 120.34 26.69 0.00 13.15 56.86 78.50 25.38 61.15 118.18 67.20 98.30 18.97 17.45 26.89 39 I8_SR2 SilentIntronRegion 0 0.91 3.94 5.50 3.93 4.03 16.97 1.99 4.99 5.15 5.52 0.83 0.77 3.32 1.15 3.27 5.12 2.84 4.55 6.85 3.20 4.27 1.79 1.90 40 ER9a ExonRegion 0 40.24 40.54 94.03 59.21 32.67 75.35 13.55 70.03 130.95 139.38 36.04 2.39 10.74 42.21 83.64 30.66 49.95 102.84 56.50 76.79 60.25 13.93 25.08 41 E9a_E10a KnownJunction 0 51.56 50.98 105.26 67.26 46.77 88.07 20.84 96.61 167.27 146.72 45.75 0.00 0.00 34.14 93.33 35.80 44.23 107.99 54.97 75.81 79.08 17.27 27.32 42 ER10a ExonRegion 0 37.89 42.24 101.20 65.54 33.56 114.40 13.58 99.74 136.77 140.28 38.40 6.40 5.48 47.90 74.62 40.19 40.27 143.01 57.78 92.87 60.20 21.66 26.56 43 E10a_E11a KnownJunction 0 71.57 86.83 124.21 64.33 52.63 223.22 12.85 122.69 146.24 143.28 26.95 11.25 14.28 52.68 79.12 34.44 30.95 147.99 78.78 90.57 69.62 21.86 18.61 44 ER11a ExonRegion 0 31.69 48.07 91.08 60.24 28.86 105.43 13.63 95.76 116.51 110.50 22.92 1.92 6.69 37.63 69.06 35.97 35.88 104.28 51.14 80.39 54.45 24.18 20.59 45 E11a_E12a KnownJunction 0 43.42 35.65 103.13 74.92 8.49 97.84 16.56 109.46 87.41 111.02 19.69 0.00 0.00 34.26 85.05 39.39 48.53 104.59 57.23 79.90 30.15 40.05 19.04 46 ER12a ExonRegion 0 23.13 34.28 58.04 47.77 21.63 54.38 9.72 60.62 81.24 83.22 19.06 3.07 3.05 28.09 56.24 27.75 20.68 62.72 39.13 50.97 39.75 19.93 15.88 47 IG28 Intergenic 0 0.82 1.69 4.43 0.90 0.95 4.89 0.39 5.87 19.40 5.97 0.11 0.00 0.00 0.05 0.06 0.00 0.20 6.01 2.17 3.72 0.07 0.00 0.26 48 IG28_SR2 SilentIntergenicRegion 0 1.15 3.91 7.38 0.85 2.07 3.53 0.79 4.80 17.64 7.73 0.00 0.00 0.00 0.00 0.00 0.00 0.15 3.97 5.24 3.61 0.00 0.00 0.97 49 IG28_AR2 ActiveIntergenicRegion 0 4.94 4.07 7.35 2.73 4.91 11.00 1.32 6.91 24.08 5.73 0.00 0.00 0.00 0.00 0.00 0.00 3.30 7.39 0.00 8.51 0.00 0.00 0.00 50 IG28_SR1 SilentIntergenicRegion 0 0.77 1.25 3.99 0.96 0.73 5.31 0.32 6.36 20.60 5.90 0.15 0.00 0.00 0.06 0.08 0.00 0.20 6.65 1.59 3.83 0.08 0.00 0.11