Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 BCAT2 Gene 0 40.91 54.28 119.74 88.68 41.98 4.64 18.24 97.03 102.72 154.47 210.67 23.28 35.22 169.07 185.89 148.78 122.70 97.07 69.78 85.05 82.16 25.51 44.03 2 316273 Transcript 1 72.65 51.82 20.37 15.07 36.97 11.53 26.76 20.02 24.05 31.58 222.10 5.48 6.33 190.42 144.51 275.25 137.43 33.91 44.20 22.84 95.66 24.13 80.55 3 402551 Transcript 0 13.93 14.56 22.62 25.27 12.53 0.52 4.34 24.98 26.33 37.55 15.46 3.09 4.43 10.92 21.27 11.49 17.61 38.43 15.44 27.29 10.16 5.81 10.74 4 IG22 Intergenic 0 3.94 1.54 6.99 4.39 2.16 0.28 0.93 5.19 11.49 4.99 0.68 0.83 0.78 1.62 0.31 0.45 1.00 3.79 9.13 2.89 7.10 0.94 11.96 5 IG22_SR2 SilentIntergenicRegion 0 4.02 0.00 2.70 3.54 3.12 1.12 0.00 5.53 8.70 1.81 0.00 0.00 1.22 0.43 0.00 0.00 0.00 0.00 6.57 2.09 6.13 1.32 15.81 6 IG22_AR3 ActiveIntergenicRegion 0 0.00 0.00 10.31 2.08 4.25 0.00 0.00 12.51 14.24 7.89 0.00 0.00 0.00 2.10 0.00 0.00 0.00 0.00 9.56 2.88 12.19 0.00 16.41 7 IG22_AR2 ActiveIntergenicRegion 0 2.59 0.71 12.87 5.98 1.76 0.00 0.92 6.07 13.21 3.59 1.35 0.76 0.67 1.50 0.36 0.00 1.15 6.74 10.70 3.45 8.48 0.73 14.33 8 ER1a ExonRegion 0 2.82 1.81 1.77 1.21 0.00 0.00 3.75 3.07 1.03 0.19 6.98 0.00 0.00 2.53 0.00 0.99 2.20 0.00 2.48 0.95 0.61 0.00 1.47 9 ER1b ExonRegion 1 40.56 40.44 19.29 12.52 27.82 8.57 22.26 19.46 23.18 30.99 169.29 0.81 5.13 164.79 134.87 200.93 109.01 25.18 38.89 24.15 73.03 17.69 65.43 10 E1_Da NovelBoundary 0 10.96 2.63 6.15 7.09 12.82 8.18 13.16 3.74 10.85 6.96 2.37 0.00 0.00 10.07 9.52 25.72 18.98 4.44 14.02 9.14 8.83 5.76 39.27 11 E1a_E2a KnownJunction 0 7.56 12.96 0.00 0.00 0.00 0.00 0.00 1.64 0.00 4.51 7.79 0.00 0.00 7.24 19.28 12.48 24.12 6.38 0.00 9.78 0.00 3.12 4.10 12 E1a_E3a KnownJunction 1 142.47 101.82 38.97 28.93 73.94 23.05 49.77 36.97 47.08 62.96 437.22 10.95 12.66 378.31 289.02 549.51 272.65 67.82 85.93 44.74 190.71 48.25 159.63 13 E1a_E5a NovelJunction 0 18.52 0.00 9.05 0.00 21.65 5.56 10.78 8.01 2.81 23.96 84.86 11.70 0.00 53.56 59.83 83.91 64.70 6.26 4.80 6.01 47.20 11.57 37.73 14 I1 Intron 0 7.46 20.80 18.05 21.09 24.30 0.56 11.26 19.15 25.25 22.72 7.48 2.92 4.09 12.81 15.75 14.24 11.38 18.38 20.63 18.26 10.80 2.24 21.15 15 I1_SR1 SilentIntronRegion 0 0.00 0.63 4.96 1.74 5.40 0.00 5.34 4.00 3.73 4.74 2.09 0.00 0.00 14.86 11.41 19.83 1.57 2.21 8.25 3.35 9.14 0.00 23.59 16 I1_AR1 ActiveIntronRegion 0 10.12 21.41 8.32 7.01 18.39 0.00 11.39 7.08 11.97 10.66 20.73 0.00 1.55 15.81 30.34 25.23 37.48 11.49 31.95 26.75 9.40 0.52 15.40 17 I1_SR2 SilentIntronRegion 0 8.56 24.36 21.69 25.36 29.19 0.75 12.77 23.33 30.51 26.83 7.01 3.89 4.62 13.07 14.95 14.11 9.81 22.44 22.13 19.01 11.76 2.70 23.31 18 I1_AR3 ActiveIntronRegion 0 0.00 5.52 10.90 18.73 2.90 0.00 5.03 11.16 14.98 19.46 2.10 0.00 6.74 9.42 13.49 4.84 3.58 4.97 8.64 18.47 9.54 2.26 15.93 19 E2_Aa NovelBoundary 0 13.78 13.09 52.33 49.94 15.20 0.00 6.36 62.51 79.22 62.72 12.21 13.05 6.66 19.13 35.85 22.22 33.29 54.76 41.51 46.98 51.15 8.21 8.54 20 ER2a ExonRegion 0 26.96 22.05 48.00 50.51 23.33 1.56 11.11 47.75 57.37 60.80 17.85 9.27 13.28 18.92 29.57 21.99 24.31 62.81 29.36 46.20 25.09 8.23 23.93 21 E2_Da NovelBoundary 0 9.85 24.14 30.72 34.59 25.81 0.00 25.84 60.58 48.12 41.96 8.84 5.70 0.00 14.66 4.45 16.58 12.34 33.12 20.80 17.96 45.90 3.00 11.27 22 E2a_E3a KnownJunction 0 7.26 8.68 19.87 25.30 14.26 0.00 1.90 25.55 21.61 47.33 20.74 0.00 0.00 6.59 14.96 0.00 4.39 46.10 16.94 25.89 5.37 6.06 4.18 23 I2 Intron 0 8.08 12.41 29.96 25.83 9.53 0.93 6.90 28.17 30.66 29.56 3.69 0.45 0.49 8.30 15.26 8.32 8.40 21.38 18.23 18.94 15.68 4.24 12.33 24 I2_AR1 ActiveIntronRegion 0 8.12 12.48 30.11 25.96 9.58 0.94 6.94 28.30 30.81 29.71 3.71 0.46 0.49 8.34 15.34 8.36 8.44 21.49 18.32 19.04 15.76 4.26 12.39 25 E3_Aa NovelBoundary 0 13.93 16.18 60.29 50.88 18.76 0.00 11.97 55.12 53.91 37.28 0.00 7.65 0.00 5.12 4.45 16.83 21.51 41.79 50.73 36.30 19.77 12.25 20.40 26 ER3a ExonRegion 0 44.93 44.55 82.08 53.99 39.03 8.80 22.77 77.11 89.27 140.18 212.67 19.40 19.64 138.14 130.17 249.82 130.72 98.37 105.24 67.80 90.85 23.70 82.07 27 E3a_E4a KnownJunction 0 10.08 17.23 94.35 53.74 19.52 0.00 8.13 99.36 93.86 157.84 82.39 35.26 19.48 42.38 82.58 28.37 69.38 82.53 72.00 56.18 34.35 10.90 16.99 28 I3_SR1 SilentIntronRegion 0 0.00 5.30 25.39 5.15 3.17 0.00 4.03 8.80 11.13 5.71 7.64 0.00 0.00 4.29 7.62 10.68 5.76 9.30 7.19 2.47 2.18 0.75 2.12 29 ER4a ExonRegion 0 20.58 40.73 140.59 89.50 43.21 1.46 20.64 115.22 117.64 189.67 277.31 14.93 19.83 180.46 176.14 210.24 169.71 138.44 109.74 92.25 114.91 26.07 69.54 30 E4a_E5a KnownJunction 1 17.56 50.91 126.28 74.45 82.34 7.61 35.86 84.12 94.36 138.07 220.74 24.76 6.82 170.76 145.99 83.74 122.11 110.18 47.06 74.21 97.30 7.47 31.84 31 E5_Aa NovelBoundary 0 2.96 10.26 22.47 23.51 16.98 2.27 12.37 25.47 24.07 12.28 55.22 0.00 6.49 32.61 19.28 28.97 26.74 20.10 41.88 25.69 17.30 5.51 20.57 32 ER5a ExonRegion 0 27.55 62.97 133.58 73.79 55.76 8.23 27.08 81.42 107.66 171.22 260.82 32.37 17.79 188.28 191.48 96.93 136.62 116.61 65.23 79.87 95.12 18.83 39.34 33 E5a_E6a KnownJunction 0 40.23 80.51 158.24 91.90 22.24 0.00 15.68 73.85 92.62 178.52 275.86 44.11 19.32 214.14 184.19 134.75 171.67 88.13 44.71 83.99 110.77 21.49 41.74 34 ER6a ExonRegion 1 45.06 47.38 115.29 58.10 28.21 5.04 15.38 54.95 69.61 138.69 251.62 27.53 15.13 206.37 179.35 130.38 148.65 94.68 50.38 81.15 99.59 23.18 28.51 35 E6a_E7a KnownJunction 0 61.79 60.06 94.79 69.29 48.56 5.22 9.94 75.86 98.70 157.28 144.51 12.15 6.82 204.37 215.84 157.39 99.39 167.51 93.56 71.01 67.65 28.60 40.12 36 ER7a ExonRegion 0 44.43 61.01 110.57 73.38 35.62 2.93 18.12 69.73 88.41 142.61 209.91 23.31 18.53 236.70 212.06 162.47 129.56 117.73 56.29 79.20 97.98 21.00 32.43 37 E7a_E8a KnownJunction 1 71.79 71.76 112.92 71.62 43.12 7.67 27.51 64.98 102.55 144.36 275.49 5.40 26.30 260.29 267.88 227.55 179.34 96.63 57.98 96.64 129.86 25.47 26.38 38 E8_Aa NovelBoundary 0 13.26 9.08 28.47 23.64 11.97 2.38 0.00 30.93 12.99 17.59 14.74 12.30 0.00 2.47 9.89 11.45 4.30 18.20 8.38 13.23 2.41 5.27 4.35 39 ER8a ExonRegion 0 87.12 91.08 180.76 117.47 63.60 8.78 31.92 109.46 135.33 219.12 321.17 33.00 49.13 272.61 278.52 234.92 202.37 117.20 83.29 130.37 122.73 39.76 44.79 40 E8a_E9a KnownJunction 0 100.68 143.92 198.49 142.94 86.08 10.22 41.69 153.45 196.67 269.53 400.00 49.97 61.68 299.78 332.53 279.93 242.17 161.17 113.23 149.31 142.83 42.19 72.99 41 ER9a ExonRegion 0 57.42 114.52 201.17 140.71 78.44 8.19 31.11 136.47 158.71 249.95 381.30 38.26 35.50 297.10 323.73 271.95 221.31 155.10 90.67 136.86 109.60 58.65 61.19 42 E9a_E10a KnownJunction 0 79.64 125.50 248.93 164.48 96.52 19.93 38.33 172.22 177.11 269.13 377.04 70.82 70.13 330.51 336.98 277.79 235.90 164.45 152.29 162.54 115.96 67.54 66.33 43 ER10a ExonRegion 0 37.83 98.32 226.60 174.55 70.52 10.47 24.95 187.22 184.93 265.37 350.42 50.45 107.01 293.06 379.26 289.12 186.04 153.30 127.80 135.10 101.82 47.14 76.23 44 E10a_E11a KnownJunction 0 51.05 116.69 310.72 236.83 97.03 24.93 19.78 268.67 220.05 298.11 487.97 29.86 53.89 308.79 491.75 236.52 270.41 122.04 194.17 174.88 123.43 54.07 50.79 45 ER11a ExonRegion 0 79.72 92.92 252.31 194.29 55.05 8.78 20.87 231.94 199.61 273.87 459.21 46.87 81.92 348.69 377.78 248.31 264.86 139.17 121.30 153.93 142.42 44.73 62.80 46 E11a_E12a KnownJunction 0 95.28 112.74 270.48 201.17 58.83 7.15 35.60 203.19 186.66 244.95 400.79 53.42 67.37 384.60 359.60 306.50 189.25 173.57 123.20 144.90 121.89 39.01 78.96 47 I11 Intron 0 5.70 5.48 16.82 21.00 9.56 0.57 4.48 20.50 13.72 14.67 4.97 1.56 1.31 6.12 6.15 8.57 4.14 9.66 7.98 7.73 4.00 1.17 2.02 48 I11_SR1 SilentIntronRegion 0 7.91 7.20 21.70 25.48 11.04 0.00 5.57 28.16 12.45 16.36 4.35 1.83 1.10 5.93 7.33 9.27 4.34 12.65 8.38 8.92 3.59 1.04 2.23 49 E12_Aa NovelBoundary 0 0.00 11.58 32.08 28.40 3.31 0.00 6.18 15.24 10.39 16.79 5.05 0.00 0.00 4.94 4.45 11.54 4.68 10.99 0.00 11.82 0.00 0.00 3.84 50 ER12a ExonRegion 0 43.67 53.53 118.08 100.83 42.57 3.44 12.93 121.57 109.01 172.16 224.37 24.02 55.69 171.49 225.88 141.36 109.67 68.76 71.19 88.81 83.41 29.27 39.75