Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ZNF175 Gene 0 48.17 54.39 39.42 45.92 46.27 35.14 26.92 34.86 39.14 49.63 38.81 66.24 46.48 33.37 24.86 30.98 30.94 23.63 23.42 34.47 19.70 39.28 24.80 2 262259 Transcript 0 20.51 16.18 10.36 15.96 22.12 21.18 11.42 17.66 19.43 29.15 30.46 20.42 17.66 31.84 17.38 28.69 35.48 18.85 18.98 24.86 23.33 23.16 15.67 3 ER1a ExonRegion 0 5.39 2.66 4.26 3.22 8.12 10.14 3.62 3.34 4.65 9.30 11.77 3.74 5.19 12.25 7.63 13.63 15.07 3.56 10.71 7.55 11.45 8.83 7.89 4 E1a_E2a KnownJunction 0 62.16 9.60 8.66 16.55 19.61 24.30 19.56 16.27 15.62 21.41 39.59 12.60 0.00 19.84 15.08 45.80 42.82 7.88 18.07 37.39 44.91 35.27 11.87 5 E2_Aa NovelBoundary 0 27.26 3.35 6.06 5.13 16.13 0.00 2.25 6.53 9.03 8.00 0.00 0.00 6.82 0.00 0.00 3.67 0.00 8.08 0.00 2.94 0.00 0.00 0.00 6 ER2a ExonRegion 0 11.05 5.52 8.71 11.77 11.49 17.19 6.30 19.52 17.19 27.11 29.10 15.75 24.81 33.98 17.93 24.64 35.24 33.57 22.58 25.80 29.15 19.29 18.11 7 E2_Da NovelBoundary 0 35.19 3.09 11.21 3.40 0.00 0.00 0.00 12.86 8.97 7.04 1.95 11.70 6.17 7.18 4.45 10.68 22.63 7.09 3.76 9.20 2.72 0.00 12.55 8 E2a_E3a KnownJunction 0 3.26 3.09 1.77 10.26 35.48 27.60 3.62 16.31 17.04 14.59 44.91 18.91 13.47 38.79 21.01 32.73 34.32 26.28 0.00 30.23 11.24 8.57 12.29 9 I2_AR1 ActiveIntronRegion 0 11.92 5.21 7.00 5.29 8.30 2.87 4.03 6.87 5.97 6.46 3.64 4.80 4.31 2.42 6.19 8.14 5.97 4.45 3.00 5.75 3.26 2.59 5.75 10 E3_Aa NovelBoundary 0 0.00 0.00 3.55 5.13 4.24 2.78 1.81 3.82 5.09 2.20 0.00 0.00 0.00 4.47 0.00 7.43 4.02 11.03 0.00 4.99 0.00 2.94 12.29 11 ER3a ExonRegion 0 11.70 9.30 5.94 16.76 17.68 25.73 11.66 10.59 20.09 28.00 28.87 16.33 15.73 34.11 12.56 20.92 41.33 18.83 16.70 26.59 27.62 18.49 16.72 12 E3_Da NovelBoundary 0 13.85 3.35 7.51 12.29 3.57 0.00 12.37 4.31 11.46 1.67 2.58 12.00 0.00 14.72 4.57 12.22 16.74 19.36 0.00 9.40 8.90 16.17 11.27 13 E3a_E4a KnownJunction 0 8.82 12.04 7.18 3.63 14.09 2.61 4.06 17.91 9.23 26.49 28.27 11.70 0.00 31.96 29.30 35.97 30.86 18.07 38.68 8.88 19.77 25.41 7.17 14 E4_Aa NovelBoundary 0 6.59 0.00 2.93 5.69 4.33 0.00 7.42 2.26 23.81 11.17 7.63 6.30 26.95 2.41 0.00 12.73 4.77 11.07 4.80 12.14 6.30 0.00 8.71 15 ER4a ExonRegion 0 14.97 20.72 5.65 9.03 27.68 23.36 16.88 17.79 17.81 35.17 25.89 27.24 28.43 42.23 19.89 32.66 45.97 21.42 23.09 23.20 27.52 22.75 20.86 16 E4_Da NovelBoundary 0 7.33 3.35 10.91 2.93 4.33 9.99 20.40 3.82 15.74 2.42 15.06 12.45 19.48 5.47 0.00 7.86 17.77 13.14 0.00 5.69 10.56 4.90 0.00 17 E4a_E5a KnownJunction 0 10.82 18.22 4.49 18.68 11.71 20.73 6.05 17.62 28.70 44.91 23.58 0.00 18.67 39.08 5.81 18.88 43.01 15.71 16.38 26.53 19.40 25.60 19.29 18 I4 Intron 0 9.28 19.38 7.03 12.00 12.01 6.79 8.01 7.85 8.33 8.34 8.28 22.94 18.09 7.67 3.95 6.79 7.88 4.30 2.10 8.23 3.54 8.49 5.50 19 I4_SR1 SilentIntronRegion 0 9.21 19.45 6.82 11.74 12.12 6.73 7.74 7.98 8.33 8.30 8.29 23.11 18.88 7.70 4.13 6.73 7.84 4.12 2.24 8.14 3.34 8.61 5.62 20 I4_AR2 ActiveIntronRegion 0 10.38 18.62 10.15 15.94 10.50 7.79 12.12 5.89 8.42 8.94 8.21 20.65 6.58 7.34 1.34 7.77 8.63 6.91 0.00 9.74 6.48 6.81 3.84 21 E5_Aa NovelBoundary 0 14.60 27.43 21.32 37.59 46.35 21.24 21.02 10.72 22.80 25.17 2.05 26.71 20.13 11.48 4.45 7.78 11.97 3.69 4.61 25.25 2.35 12.06 7.00 22 ER5a ExonRegion 0 56.41 64.51 46.55 53.73 53.25 38.93 31.01 39.63 44.54 55.34 42.12 77.54 52.67 34.36 27.17 32.96 30.72 24.36 24.58 37.55 18.90 44.19 26.86 23 IG44 Intergenic 0 11.54 15.90 23.25 15.44 16.22 10.52 5.41 13.12 16.83 15.51 4.09 8.32 2.95 6.94 7.03 8.42 6.28 15.55 10.51 15.19 4.03 6.35 7.16 24 IG44_SR1 SilentIntergenicRegion 0 14.69 30.64 22.92 16.41 22.09 14.24 9.38 15.67 14.81 12.22 0.98 14.67 4.63 9.37 6.00 7.82 5.20 5.04 7.89 15.58 1.03 11.00 6.08 25 IG44_AR1 ActiveIntergenicRegion 0 23.28 40.67 31.86 17.04 24.97 22.01 4.85 10.66 12.35 19.88 3.87 14.43 0.00 14.35 12.09 10.90 9.90 3.70 3.19 29.79 2.20 6.95 6.85 26 IG44_SR2 SilentIntergenicRegion 0 10.17 13.40 25.35 12.90 11.48 9.12 3.43 13.46 16.61 17.70 4.38 5.95 1.92 5.16 5.34 6.23 6.61 22.60 9.94 14.58 4.61 4.25 4.74 27 IG44_AR2 ActiveIntergenicRegion 0 12.61 12.45 22.66 18.64 18.77 10.54 6.30 12.48 19.27 16.03 5.32 8.89 3.01 8.25 9.72 11.47 6.81 14.57 12.93 15.99 5.15 6.84 10.43