Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 BBC3 Gene 0 3.40 7.23 43.03 23.78 6.06 21.83 3.64 23.76 37.01 23.09 56.05 7.94 12.70 62.79 62.01 53.62 53.68 33.99 29.93 34.76 84.31 13.08 31.45 2 449228 Transcript 0 0.00 0.00 1.66 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.90 6.00 0.00 4.65 0.00 16.24 7.85 0.00 0.00 0.00 39.04 5.88 15.96 3 300880 Transcript 0 0.00 0.00 1.12 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.47 0.00 7.86 0.00 0.00 0.00 0.00 5.62 0.00 0.00 4 341983 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.51 0.00 0.00 0.00 0.00 0.00 7.42 0.00 23.93 7.67 0.00 0.00 0.00 3.15 7.90 16.13 5 359924 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 439096 Transcript 0 1.06 0.00 0.00 0.00 2.68 0.00 0.66 0.00 0.00 1.15 2.90 0.00 0.00 8.12 1.45 0.00 0.00 0.00 0.00 0.00 4.41 0.00 0.00 7 IG21_AR1 ActiveIntergenicRegion 0 1.52 0.37 4.26 14.95 0.48 0.00 0.48 2.31 7.27 4.60 7.63 35.35 158.59 6.09 12.20 16.55 19.55 7.09 14.87 25.60 10.68 0.75 10.55 8 ER1a ExonRegion 0 0.00 0.00 1.03 1.24 0.00 0.74 0.54 1.31 0.74 0.01 5.34 3.08 0.78 11.12 7.15 25.40 13.92 0.80 1.29 0.89 31.48 6.85 42.12 9 E1_Da NovelBoundary 0 0.00 0.00 1.54 0.00 0.00 0.00 0.00 1.73 0.00 0.00 0.00 0.00 0.00 2.47 0.00 3.85 4.30 0.00 0.00 0.00 3.15 2.33 11.44 10 E1a_E3a KnownJunction 0 0.00 0.00 1.66 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.90 6.00 0.00 4.65 0.00 16.24 7.85 0.00 0.00 0.00 39.04 5.88 15.96 11 E1a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.51 0.00 0.00 0.00 0.00 0.00 7.42 0.00 23.93 7.67 0.00 0.00 0.00 3.15 7.90 16.13 12 E1a_E5a KnownJunction 0 0.00 0.00 1.12 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.47 0.00 7.86 0.00 0.00 0.00 0.00 5.62 0.00 0.00 13 I1 Intron 0 0.50 0.24 1.31 0.73 0.64 0.00 0.32 0.46 0.88 0.61 2.07 9.16 0.89 6.91 2.60 6.37 3.54 3.17 4.74 1.01 4.98 1.61 14.17 14 I1_SR1 SilentIntronRegion 0 0.00 0.75 0.00 1.50 1.98 0.00 0.49 0.00 0.68 0.00 1.43 2.64 0.00 3.42 2.71 14.26 1.22 1.70 0.00 0.79 4.06 1.54 16.28 15 I1_AR1 ActiveIntronRegion 0 0.87 0.28 2.96 0.44 0.73 0.00 0.54 0.35 1.32 0.93 2.92 12.16 2.04 8.14 3.01 4.30 3.81 3.75 8.17 1.16 6.53 1.99 13.75 16 I1_SR2 SilentIntronRegion 0 0.32 0.00 0.04 0.74 0.00 0.00 0.00 0.77 0.48 0.51 1.44 8.66 0.00 7.07 2.15 5.53 4.23 3.18 2.98 0.96 3.73 1.25 13.98 17 ER2a ExonRegion 0 0.41 0.00 2.49 0.78 0.51 1.76 0.51 0.38 2.77 2.31 12.22 2.72 2.75 14.15 11.03 6.85 6.96 3.18 12.78 4.82 14.71 2.40 5.38 18 E2a_E3a KnownJunction 0 0.00 0.00 1.12 0.00 0.00 0.00 0.00 3.86 8.39 17.16 35.06 0.00 6.33 7.71 6.30 22.90 0.00 13.10 3.48 8.82 41.08 0.00 4.35 19 E2a_E4a NovelJunction 1 0.00 0.00 9.34 4.66 4.16 5.56 2.25 8.79 2.31 1.40 12.53 0.00 0.00 7.06 8.90 52.98 13.09 26.74 29.93 9.33 17.17 0.00 12.29 20 E2a_E5a NovelJunction 0 0.00 0.00 5.94 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.47 4.45 0.00 13.93 4.85 0.00 0.00 3.03 0.00 0.00 21 I2 Intron 0 2.05 1.44 13.28 5.42 2.80 4.22 1.73 4.72 9.73 3.71 7.18 8.42 7.10 8.92 8.49 10.65 9.07 14.53 9.75 9.63 23.53 4.53 18.75 22 I2_SR1 SilentIntronRegion 0 1.72 0.22 7.13 3.60 1.64 2.44 1.27 2.31 3.78 2.24 3.25 3.42 6.19 6.18 5.84 5.92 4.60 6.46 5.97 5.27 13.15 2.49 10.82 23 I2_AR1 ActiveIntronRegion 0 2.55 1.28 12.13 5.26 4.62 6.47 2.65 6.35 12.64 4.00 10.37 18.57 10.70 12.06 9.77 14.26 12.61 19.94 19.81 11.88 30.60 7.22 26.89 24 I2_SR2 SilentIntronRegion 0 2.26 3.41 23.50 8.34 3.51 5.65 1.91 7.48 17.20 5.82 11.36 10.12 6.39 11.31 11.84 15.85 13.88 23.79 9.63 15.05 35.39 6.08 26.20 25 E3_Aa NovelBoundary 0 0.00 0.00 12.63 3.53 0.00 0.00 0.00 3.53 4.57 5.43 14.69 0.00 0.00 6.89 5.19 3.76 0.00 10.90 0.00 0.00 10.13 0.00 14.94 26 ER3a ExonRegion 0 0.00 1.21 6.51 1.18 0.47 6.96 0.23 2.81 6.45 7.89 27.62 5.50 7.59 25.58 12.52 20.50 16.94 12.10 5.75 7.86 30.01 4.17 14.93 27 E3a_E4a KnownJunction 0 0.00 3.09 11.53 7.46 0.00 13.46 0.00 2.05 9.17 14.21 20.27 0.00 18.99 40.56 36.71 30.68 31.04 39.67 26.82 24.54 17.67 8.76 4.35 28 I3 Intron 0 0.79 0.59 9.11 3.85 1.99 3.93 0.66 3.61 6.60 3.10 13.15 4.81 2.30 8.56 7.89 12.25 10.62 8.90 6.30 3.51 18.35 5.24 18.16 29 I3_SR1 SilentIntronRegion 0 0.59 0.34 8.45 3.97 2.09 2.97 0.59 3.31 6.06 3.34 9.60 4.35 2.25 6.51 4.25 9.29 7.74 9.89 4.98 2.85 16.35 5.00 15.57 30 I3_AR1 ActiveIntronRegion 0 1.34 1.29 10.99 3.54 1.70 6.68 0.84 4.49 8.16 2.44 23.27 6.13 2.45 14.39 18.27 20.71 18.82 6.11 10.09 5.39 24.08 5.94 25.58 31 E4_Aa NovelBoundary 0 14.08 0.00 22.26 10.49 7.89 8.52 1.90 3.74 12.33 1.34 24.80 0.00 6.49 29.25 8.90 20.93 21.51 8.66 9.22 6.01 16.80 5.51 26.12 32 ER4a ExonRegion 0 2.99 6.42 28.03 22.71 2.93 23.80 2.45 21.08 28.90 21.79 72.14 5.15 10.71 77.07 67.15 44.99 70.91 29.24 28.02 36.34 78.42 7.93 34.47 33 E4_Da NovelBoundary 0 0.00 0.00 1.57 3.40 0.00 0.00 0.00 0.00 7.18 2.79 7.11 0.00 0.00 3.00 0.00 4.19 0.00 9.87 0.00 0.00 8.53 0.00 11.87 34 E4a_E5a KnownJunction 0 21.63 6.25 55.32 63.36 27.76 58.43 0.00 52.70 71.15 39.92 69.86 11.85 6.82 121.90 134.62 93.91 74.05 84.32 49.98 94.92 111.38 26.82 58.30 35 I4 Intron 0 2.51 1.95 22.03 11.30 4.01 5.85 1.16 6.04 10.40 4.44 5.02 5.23 6.01 5.18 5.79 13.69 7.65 11.09 7.29 6.79 21.92 6.00 17.68 36 I4_SR1 SilentIntronRegion 0 2.13 2.04 18.04 8.67 4.82 5.37 1.05 5.93 11.02 4.79 4.29 6.26 7.77 4.92 5.25 15.18 8.57 8.85 7.47 5.97 20.11 6.19 15.62 37 I4_AR1 ActiveIntronRegion 0 3.32 1.77 30.41 16.82 2.33 6.87 1.39 6.29 9.15 3.72 6.57 3.11 2.36 5.74 6.95 10.62 5.75 15.79 6.94 8.53 25.74 5.63 22.02 38 E5_Aa NovelBoundary 0 3.48 5.53 30.04 17.98 7.98 12.83 0.00 2.46 5.90 7.47 7.42 0.00 0.00 4.94 0.00 7.86 3.55 3.73 4.80 5.94 19.46 8.08 35.08 39 ER5a ExonRegion 0 5.89 12.42 75.07 40.85 10.83 35.24 6.25 40.76 63.39 37.83 83.33 11.47 19.61 94.16 99.55 82.03 81.15 55.94 47.59 56.86 129.20 20.44 39.32 40 ER5b ExonRegion 0 2.12 0.00 4.08 4.54 8.03 12.84 1.32 1.73 2.06 1.53 19.33 11.55 6.25 10.83 2.90 3.96 13.20 1.23 0.00 0.71 13.96 1.39 3.92 41 ER5c ExonRegion 0 1.06 0.00 0.00 0.00 2.68 0.00 0.66 0.00 0.00 1.15 2.90 0.00 0.00 8.12 1.45 0.00 0.00 0.00 0.00 0.00 4.41 0.00 0.00 42 IG20_AR1 ActiveIntergenicRegion 0 12.99 23.19 27.70 16.73 21.58 9.49 11.56 23.31 28.87 16.85 27.42 21.88 8.09 20.41 26.51 25.25 20.88 19.43 25.65 40.71 7.61 11.58 4.53