Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 VRK3 Gene 0 84.19 34.45 60.89 40.46 47.64 39.49 26.16 53.55 65.63 62.02 148.21 52.12 45.92 149.35 161.17 156.68 114.67 49.58 56.94 27.54 87.35 51.23 49.39 2 424804 Transcript 0 11.16 0.92 2.17 0.81 5.59 6.08 3.31 2.99 1.96 3.28 7.29 4.33 4.05 18.16 15.69 22.70 13.80 4.54 0.00 0.00 6.01 7.20 3.07 3 377011 Transcript 1 7.41 3.35 11.56 12.79 7.05 2.90 2.21 6.61 13.54 4.78 6.84 6.30 6.82 36.91 35.60 243.95 16.18 87.72 73.32 19.49 0.00 19.41 69.66 4 457289 Transcript 0 14.08 12.37 10.38 15.28 11.38 15.45 0.00 10.06 8.10 16.09 10.63 0.00 20.45 23.90 31.15 34.01 14.31 25.49 22.68 0.00 8.09 6.25 4.10 5 316763 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 443401 Transcript 0 3.63 11.71 1.83 4.86 0.00 0.00 2.25 2.34 6.48 1.50 0.00 0.00 0.00 0.00 0.00 11.54 0.00 2.32 4.52 5.18 0.00 0.00 0.00 7 ER1a ExonRegion 0 21.84 9.21 1.61 2.43 7.05 6.31 3.16 4.28 5.70 4.87 14.18 0.68 0.02 9.95 9.95 11.69 11.53 3.92 7.91 3.75 4.70 4.12 8.08 8 E1a_E2a KnownJunction 0 19.48 5.92 1.24 3.33 12.48 9.94 12.32 12.86 16.67 5.45 15.79 0.00 0.00 2.47 0.00 7.26 0.00 4.48 8.47 9.20 5.62 0.00 7.77 9 E2_Aa NovelBoundary 1 2.82 0.00 4.97 2.06 7.89 5.79 0.00 9.73 3.36 2.98 0.00 0.00 20.13 0.00 0.00 0.00 0.00 0.00 0.00 2.43 0.00 0.00 4.01 10 ER2a ExonRegion 0 136.36 70.63 21.55 32.58 43.45 43.34 31.00 37.78 63.83 47.28 49.30 14.57 17.20 52.46 31.27 146.25 78.65 52.94 50.26 37.69 58.14 49.48 44.84 11 E2a_E3a KnownJunction 0 59.12 15.00 32.70 62.73 33.62 18.11 6.27 52.86 86.78 67.15 52.22 5.85 41.39 21.66 40.79 63.32 69.94 61.02 35.39 14.19 34.53 16.90 12.04 12 ER3a ExonRegion 0 28.01 13.07 65.87 73.20 36.43 22.56 12.78 80.99 128.06 97.45 228.90 39.95 53.33 194.13 190.80 262.46 173.08 84.93 121.95 60.14 129.99 96.63 94.22 13 E3a_E4a KnownJunction 0 33.71 19.08 86.81 71.35 83.28 16.81 11.97 101.29 156.62 135.92 184.20 70.82 39.61 196.48 128.93 346.23 139.60 86.18 129.42 58.04 119.23 82.85 113.45 14 E3a_E5a KnownJunction 1 7.41 3.35 11.56 12.79 7.05 2.90 2.21 6.61 13.54 4.78 6.84 6.30 6.82 36.91 35.60 243.95 16.18 87.72 73.32 19.49 0.00 19.41 69.66 15 ER4a ExonRegion 0 192.57 107.64 66.70 47.16 151.48 124.06 82.78 86.47 105.73 102.27 204.02 79.81 90.36 139.59 113.25 152.91 157.06 58.45 72.84 29.29 108.13 56.71 53.25 16 E4a_E5a KnownJunction 1 1235.70 259.69 96.54 60.93 73.09 48.21 36.30 128.19 141.26 129.90 300.87 87.63 299.82 305.79 318.07 331.54 229.36 73.33 193.98 36.82 141.47 114.38 77.85 17 E5_Aa NovelBoundary 0 3.26 0.00 2.72 0.00 20.29 2.50 2.08 4.64 4.98 1.32 2.37 0.00 20.45 0.00 0.00 24.95 8.98 4.60 0.00 6.01 2.90 2.76 4.18 18 ER5a ExonRegion 0 168.22 72.03 91.88 55.14 50.73 38.86 33.36 98.07 112.87 96.10 223.95 78.89 90.02 220.70 219.34 236.95 178.03 108.48 96.04 53.99 123.78 78.44 71.22 19 E5a_E6a KnownJunction 0 157.44 91.23 109.84 42.52 83.87 64.96 55.38 102.07 135.70 98.69 286.02 104.88 135.38 293.90 363.31 302.23 249.37 126.14 186.64 46.60 183.60 105.57 86.64 20 ER6a ExonRegion 0 60.40 44.93 79.06 50.91 54.54 52.16 35.50 89.00 102.72 100.68 216.40 39.63 66.09 226.25 203.53 210.01 186.48 84.17 66.99 40.62 136.49 66.74 50.96 21 E6_Da NovelBoundary 0 0.00 6.25 0.00 3.53 4.33 2.38 8.04 16.68 9.40 5.16 4.84 0.00 0.00 0.00 11.37 23.33 22.35 16.75 4.52 5.43 14.64 2.69 3.33 22 E6a_E7a KnownJunction 0 53.86 30.39 50.00 46.41 55.77 37.48 33.70 74.06 73.44 75.54 194.42 70.07 40.74 212.20 211.63 230.03 156.52 57.79 44.61 56.76 108.73 45.25 49.08 23 E6a_E8a KnownJunction 0 14.08 12.37 10.38 15.28 11.38 15.45 0.00 10.06 8.10 16.09 10.63 0.00 20.45 23.90 31.15 34.01 14.31 25.49 22.68 0.00 8.09 6.25 4.10 24 E6a_E9a KnownJunction 0 3.63 11.71 1.83 4.86 0.00 0.00 2.25 2.34 6.48 1.50 0.00 0.00 0.00 0.00 0.00 11.54 0.00 2.32 4.52 5.18 0.00 0.00 0.00 25 ER7a ExonRegion 0 45.33 26.32 53.26 40.38 37.26 24.61 17.73 51.13 63.27 61.88 155.44 73.21 33.53 170.61 203.95 165.20 128.83 47.90 36.47 23.28 107.98 51.43 49.84 26 E7_Da NovelBoundary 0 2.89 9.14 11.38 3.73 0.00 0.00 19.39 1.81 3.10 4.62 0.00 0.00 0.00 7.89 19.66 9.74 0.00 8.29 0.00 2.81 5.44 2.63 3.59 27 E7a_E8a KnownJunction 0 110.09 45.58 72.62 47.91 76.40 25.55 30.69 46.66 70.17 68.79 185.73 75.17 66.55 227.85 242.78 166.20 168.02 70.10 49.79 26.33 99.28 84.93 56.25 28 I7 Intron 0 20.51 2.85 13.25 13.72 6.14 1.40 5.74 10.83 15.96 6.53 1.97 1.36 0.98 1.95 8.79 7.96 6.73 16.63 7.31 9.22 6.74 4.78 10.48 29 I7_SR1 SilentIntronRegion 0 20.65 2.87 13.35 13.83 6.19 1.41 5.78 10.91 16.07 6.58 1.99 1.37 0.99 1.96 8.86 8.02 6.78 16.76 7.37 9.29 6.79 4.82 10.56 30 E8_Aa NovelBoundary 0 23.63 6.18 17.12 8.89 4.33 0.00 5.96 11.50 12.04 4.49 2.68 0.00 0.00 2.47 10.75 0.00 8.79 26.90 9.60 0.00 14.02 0.00 6.32 31 ER8a ExonRegion 0 92.70 38.81 80.96 59.82 44.86 35.99 32.88 51.00 91.82 80.66 191.74 91.43 46.90 256.59 196.98 189.06 160.54 65.82 62.10 30.31 119.80 71.43 64.36 32 E8_Da NovelBoundary 0 3.63 0.00 19.78 1.83 3.90 0.00 0.00 7.64 14.93 6.18 4.74 5.25 0.00 2.47 20.52 3.76 8.70 18.74 9.60 15.60 5.50 5.88 0.00 33 E8a_E9a KnownJunction 0 95.05 57.56 86.07 69.65 61.88 43.67 43.37 68.06 115.05 90.77 177.57 51.92 97.07 305.43 185.55 239.25 154.46 48.58 59.86 22.05 132.94 65.34 52.58 34 ER9a ExonRegion 0 117.87 32.92 84.39 64.39 47.66 52.38 37.07 67.43 98.73 79.70 200.84 65.02 33.01 219.56 200.13 208.39 144.80 71.64 48.89 34.81 118.77 52.23 46.71 35 E9_Da NovelBoundary 0 3.63 13.35 10.94 10.62 3.90 5.51 2.16 6.41 9.52 4.46 0.00 0.00 7.63 8.30 13.35 4.36 0.00 23.26 3.86 3.26 11.68 0.00 3.50 36 E9a_E10a KnownJunction 1 117.50 29.27 79.74 73.28 77.67 102.61 41.82 60.42 95.89 101.24 152.30 17.71 19.48 180.94 194.70 154.92 112.95 94.80 49.22 34.26 105.70 73.66 48.32 37 E10_Aa NovelBoundary 0 15.48 12.89 10.08 1.43 0.00 2.84 8.13 13.76 19.07 3.57 2.63 6.30 0.00 4.94 4.45 4.36 4.77 4.27 7.34 3.26 11.43 2.69 15.71 38 ER10a ExonRegion 0 103.12 41.07 88.62 67.95 77.77 75.09 47.32 73.32 93.59 96.87 208.46 77.14 38.53 235.69 255.87 176.95 157.84 72.80 70.22 44.18 138.86 75.03 49.29 39 E10a_E11a KnownJunction 0 110.46 67.88 97.25 74.72 100.93 53.09 46.37 97.43 110.30 96.27 215.84 60.92 46.59 219.61 351.57 197.13 141.00 72.17 105.23 40.78 131.52 62.40 83.74 40 ER11a ExonRegion 0 81.81 53.50 90.02 34.70 44.90 47.40 28.35 61.35 80.41 73.68 170.21 46.52 28.10 196.37 231.93 166.75 139.88 56.84 44.81 37.45 123.23 53.26 63.99 41 E11a_E12a KnownJunction 0 98.17 51.04 100.09 45.91 48.64 32.88 19.74 56.81 97.05 75.05 128.98 37.66 19.15 163.40 205.82 139.11 112.11 67.11 68.90 22.24 112.50 60.38 37.99 42 E12_Aa NovelBoundary 0 3.78 0.00 6.50 5.53 23.26 0.00 0.00 10.23 5.15 6.53 7.32 0.00 0.00 6.89 10.75 15.72 8.60 2.57 0.00 2.81 2.72 3.00 0.00 43 ER12a ExonRegion 0 96.66 32.99 104.25 48.43 71.80 65.94 31.76 60.41 78.08 62.24 158.05 52.92 49.46 202.32 268.40 200.04 123.22 52.99 63.92 32.97 118.98 52.29 78.15 44 E12_Da NovelBoundary 0 0.00 22.50 5.29 18.98 15.87 12.55 2.25 39.02 44.10 28.93 4.63 5.40 0.00 9.95 10.14 0.00 4.02 31.88 7.53 27.68 5.56 2.33 11.10 45 E12a_E14a KnownJunction 0 105.43 21.84 74.36 23.71 97.11 83.65 34.49 29.90 44.50 50.61 182.63 44.71 34.41 183.94 263.55 173.20 134.64 33.91 29.08 18.73 108.30 30.62 62.14 46 I12_AR1 ActiveIntronRegion 0 0.88 5.95 5.34 1.70 5.59 3.83 2.77 12.92 16.93 2.86 0.81 0.00 0.00 5.19 3.57 0.00 1.38 15.74 6.66 19.57 3.68 0.87 1.23 47 I12_AR3 ActiveIntronRegion 0 8.26 20.62 14.87 24.02 17.04 14.62 7.80 24.44 41.63 12.66 4.19 4.72 2.92 4.64 11.02 6.57 6.87 17.03 12.56 18.44 4.58 2.89 7.63 48 ER13a ExonRegion 0 11.16 0.92 2.17 0.81 5.59 6.08 3.31 2.99 1.96 3.28 7.29 4.33 4.05 18.16 15.69 22.70 13.80 4.54 0.00 0.00 6.01 7.20 3.07 49 E14_Aa NovelBoundary 0 28.75 0.00 3.34 2.00 20.37 0.00 21.20 2.09 0.00 6.93 2.21 0.00 6.82 4.94 0.00 4.36 4.77 0.00 0.00 0.00 0.00 3.12 7.51 50 ER14a ExonRegion 0 66.87 10.44 71.57 27.95 68.53 54.92 33.10 36.82 32.47 50.70 144.51 41.90 54.45 186.17 206.68 193.09 96.96 29.56 50.59 18.90 90.58 40.36 65.70 51 E14_Da NovelBoundary 0 3.19 0.00 0.00 1.93 8.06 0.00 4.42 4.44 3.96 1.61 0.00 0.00 0.00 2.12 6.06 0.00 8.32 0.00 8.56 0.00 0.00 0.00 20.32 52 E14a_E15a KnownJunction 1 78.90 5.66 78.74 35.46 73.60 43.78 26.01 48.47 24.91 49.86 115.50 37.96 75.16 157.10 258.36 214.82 63.30 17.66 70.78 5.43 60.05 63.32 51.56 53 ER15a ExonRegion 0 68.20 7.73 73.74 38.88 35.87 21.34 14.97 37.71 34.63 47.77 156.90 53.06 57.10 153.71 183.94 170.77 107.57 24.42 57.54 12.55 75.66 56.79 48.90 54 E15_Da NovelBoundary 0 19.78 0.00 6.27 6.23 7.89 10.11 3.71 10.64 10.33 17.68 2.53 6.15 0.00 7.06 15.20 7.78 17.02 6.09 13.27 0.00 11.06 14.82 23.22 55 E15a_E16a KnownJunction 0 51.27 2.63 57.86 45.42 49.75 37.99 25.88 34.09 32.26 53.59 134.82 55.37 61.52 148.45 258.85 138.00 97.24 15.50 34.45 8.88 55.11 33.25 35.85 56 I15 Intron 0 15.69 1.70 9.12 8.24 9.33 4.49 4.48 6.22 5.93 11.40 12.70 5.19 11.01 14.28 16.21 17.64 10.63 3.11 7.80 2.36 16.47 15.58 14.77 57 I15_AR1 ActiveIntronRegion 0 8.19 1.01 5.49 4.97 6.60 1.88 4.36 5.04 5.66 8.26 7.29 6.07 7.64 11.51 6.78 11.14 6.37 2.99 5.22 2.18 11.54 15.59 7.63 58 I15_AR2 ActiveIntronRegion 0 19.36 2.25 12.37 11.34 12.23 6.19 4.72 6.43 7.31 12.48 14.37 5.27 13.89 17.70 19.43 16.85 11.30 3.05 11.99 1.49 20.88 19.92 19.64 59 I15_SR1 SilentIntronRegion 0 18.60 1.80 8.87 7.91 8.76 4.05 5.03 7.86 5.99 15.29 16.31 5.95 12.57 15.08 19.96 24.62 14.11 3.94 6.09 3.27 17.92 15.24 16.84 60 ER16a ExonRegion 0 40.86 3.67 34.52 28.09 27.38 18.04 9.94 28.69 16.02 32.64 93.87 58.53 38.72 81.47 135.07 107.31 63.31 11.60 40.72 4.91 43.31 33.73 27.42 61 IG34 Intergenic 0 16.97 0.51 3.78 2.42 3.69 1.15 2.49 1.29 2.65 2.68 1.94 0.89 1.80 0.59 1.59 2.98 0.83 0.86 0.20 0.13 0.55 0.13 1.66 62 IG34_AR1 ActiveIntergenicRegion 0 25.39 0.42 4.00 2.54 3.35 0.57 2.76 1.34 3.46 2.67 2.62 0.74 1.70 0.70 0.64 2.79 1.03 1.15 0.00 0.00 0.69 0.22 1.23