Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 IL4I1 Gene 0 16.40 0.51 6.08 2.94 11.94 4.72 7.32 25.90 10.56 12.31 304.03 21.68 57.25 170.46 232.15 59.82 187.71 0.94 0.73 0.31 4.25 1.88 17.41 2 341114 Transcript 0 0.44 0.42 0.38 0.42 0.00 1.89 0.27 0.00 0.28 0.00 3.97 0.68 0.00 0.55 1.29 0.00 2.38 0.00 0.66 0.88 0.00 0.00 0.00 3 319225 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 391826 Transcript 1 70.29 0.00 3.28 0.24 47.82 19.14 42.55 23.82 4.30 14.08 585.70 3.81 9.54 200.26 429.14 215.42 491.33 0.00 0.00 0.00 2.95 6.14 50.74 5 ER1a ExonRegion 0 0.87 0.84 0.75 0.84 0.00 3.77 0.54 0.00 0.56 0.00 7.95 1.36 0.00 1.10 2.57 0.00 0.00 0.00 1.31 1.75 0.00 0.00 0.00 6 E1_Ab KnownBoundary 0 76.01 91.43 38.97 14.95 20.46 79.95 74.11 54.75 39.90 64.52 168.10 12.60 93.34 105.95 164.04 252.41 181.77 223.35 186.92 105.21 51.46 8.70 133.25 7 ER1b ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.36 0.00 2.02 0.14 0.00 0.07 2.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 ER2a ExonRegion 0 4.27 1.62 0.86 0.77 1.07 0.72 0.50 1.06 2.90 1.37 3.17 0.00 2.92 1.36 1.93 2.61 0.05 2.18 1.31 4.19 0.89 0.00 1.20 10 E2a_E3a KnownJunction 0 0.00 0.00 3.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.47 0.00 3.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 Ix Intron 0 15.86 17.24 24.36 10.48 14.54 9.38 13.77 20.16 14.71 28.61 21.58 13.93 16.54 19.62 29.32 30.57 26.13 40.43 19.86 42.70 10.21 8.36 15.87 12 Ix_AR16 ActiveIntronRegion 0 30.36 42.13 29.59 11.33 25.59 10.72 28.84 18.47 10.76 26.33 19.00 14.81 19.64 12.21 34.86 22.88 35.95 29.78 26.23 54.81 9.35 7.18 15.60 13 Ix_SR12 SilentIntronRegion 0 8.66 16.96 30.06 9.93 12.21 7.51 13.60 21.05 12.24 27.85 18.57 10.09 16.06 16.71 31.20 35.65 26.65 50.61 22.87 47.92 10.57 4.85 17.53 14 Ix_SR11 SilentIntronRegion 0 2.23 13.42 24.57 6.69 12.75 6.80 13.53 18.95 10.40 16.93 14.55 17.55 14.84 14.59 36.56 28.05 17.22 41.56 26.06 50.48 11.62 6.55 17.51 15 Ix_AR15 ActiveIntronRegion 0 12.48 15.46 22.95 10.65 12.13 7.90 15.23 18.72 14.80 30.65 14.26 9.66 19.64 17.69 22.80 36.67 16.60 62.35 20.44 44.71 8.45 8.96 18.46 16 Ix_SR10 SilentIntronRegion 0 8.25 7.31 9.93 5.65 8.43 7.91 7.98 10.96 8.81 16.22 13.04 7.66 7.12 14.69 22.55 26.73 20.85 30.44 14.99 35.67 9.15 2.89 10.18 17 Ix_AR14 ActiveIntronRegion 0 11.92 15.80 21.77 9.69 8.63 6.72 11.48 13.64 12.69 30.62 13.34 3.04 8.45 16.46 25.15 26.14 28.68 43.98 18.80 42.56 9.79 4.88 17.97 18 Ix_AR13 ActiveIntronRegion 0 30.00 15.79 37.99 21.41 17.00 11.22 29.44 23.49 28.33 32.18 12.17 0.51 25.66 38.12 40.11 55.77 42.52 42.93 15.18 66.21 8.17 11.03 35.76 19 Ix_AR12 ActiveIntronRegion 0 25.66 12.71 37.68 11.58 20.40 10.09 22.67 23.55 24.39 27.38 18.85 4.33 28.14 27.81 33.36 58.70 46.21 42.96 13.94 63.03 5.23 10.42 35.97 20 Ix_SR9 SilentIntronRegion 0 14.82 6.68 41.14 11.29 15.67 9.17 15.13 18.27 18.70 19.83 18.50 4.33 22.11 24.59 24.87 50.53 35.84 46.72 6.37 45.90 5.67 9.52 24.75 21 Ix_AR11 ActiveIntronRegion 0 0.00 2.03 43.89 11.15 18.24 9.84 10.11 14.61 15.72 13.76 19.15 7.87 12.79 25.69 24.27 39.72 34.51 50.90 13.90 34.43 6.01 7.96 21.62 22 Ix_AR10 ActiveIntronRegion 0 1.41 2.03 43.91 14.08 16.05 8.56 10.37 16.42 16.06 17.97 19.33 8.66 14.07 20.57 24.66 35.17 33.01 60.67 30.26 35.11 4.77 3.13 27.90 23 Ix_AR9 ActiveIntronRegion 0 2.12 0.00 39.08 12.42 18.73 7.34 5.30 22.85 15.64 18.73 17.61 10.58 13.55 16.06 29.01 44.25 35.21 64.06 37.52 40.66 5.88 5.09 24.15 24 Ix_SR8 SilentIntronRegion 0 6.55 6.81 21.50 9.24 16.18 6.39 11.18 18.08 11.56 19.88 10.49 24.50 11.30 17.89 21.20 29.39 19.42 36.69 15.37 31.81 6.82 4.50 19.82 25 Ix_AR8 ActiveIntronRegion 0 18.12 10.84 13.64 14.52 24.34 11.71 18.87 19.89 14.55 20.45 15.57 24.85 34.26 16.18 25.42 23.30 23.80 26.20 17.25 41.11 8.62 5.38 17.34 26 Ix_SR7 SilentIntronRegion 0 10.21 7.01 16.98 6.33 13.72 5.39 11.13 11.07 8.41 20.40 17.93 6.13 8.81 10.91 22.85 19.02 18.93 25.11 13.71 32.52 6.03 4.97 11.41 27 Ix_AR6 ActiveIntronRegion 0 2.47 9.92 23.55 15.00 27.16 9.41 10.02 19.74 11.71 28.87 23.97 23.85 13.54 24.85 32.50 38.01 31.85 50.73 26.18 43.06 10.11 10.82 15.04 28 Ix_SR6 SilentIntronRegion 0 9.00 10.60 16.78 10.89 10.85 3.59 10.60 10.35 9.16 16.27 12.52 9.28 3.56 13.14 19.03 14.59 20.20 32.41 13.93 31.40 4.73 5.37 12.45 29 Ix_AR5 ActiveIntronRegion 0 13.97 20.30 18.40 7.00 14.27 9.32 19.35 15.56 3.15 15.94 20.55 12.12 8.68 9.12 21.18 12.98 22.12 16.26 5.20 22.16 8.34 1.81 13.51 30 Ix_AR4 ActiveIntronRegion 0 13.15 28.50 47.97 18.02 19.47 17.51 14.58 31.91 9.28 38.15 21.21 11.09 5.04 24.12 30.03 37.75 36.97 36.24 22.38 40.77 14.13 9.87 16.70 31 Ix_SR5 SilentIntronRegion 0 13.83 15.08 32.34 11.53 12.91 8.45 9.62 16.92 12.45 25.82 25.49 14.53 15.57 25.32 29.84 33.74 30.52 45.42 21.64 30.51 8.42 8.61 15.91 32 Ix_AR3 ActiveIntronRegion 0 30.48 20.29 37.42 18.36 19.80 10.41 16.15 29.22 25.24 41.39 31.25 19.05 25.94 25.01 49.30 42.26 31.86 58.82 23.06 62.01 18.06 13.43 20.68 33 Ix_SR4 SilentIntronRegion 0 35.44 26.77 34.73 14.76 18.71 12.81 17.68 32.12 22.89 42.26 30.36 23.95 21.90 26.80 38.58 39.99 29.76 45.32 20.54 57.53 15.82 14.07 16.10 34 Ix_SR3 SilentIntronRegion 0 37.39 42.48 28.86 12.27 23.49 15.89 12.50 30.34 37.05 48.93 36.73 12.99 32.83 44.03 32.56 70.01 35.58 68.98 8.49 55.08 13.47 17.36 23.49 35 Ix_AR2 ActiveIntronRegion 0 12.94 21.07 17.51 9.05 11.82 13.50 10.97 14.35 16.73 32.98 24.94 10.98 25.48 24.26 29.66 31.43 25.11 47.15 21.15 39.27 7.81 11.72 12.57 36 Ix_SR2 SilentIntronRegion 0 8.92 17.77 14.52 7.32 14.47 11.61 12.96 18.24 12.23 20.36 21.98 17.31 20.42 18.64 16.10 19.84 23.78 20.53 16.53 28.75 7.03 10.13 11.00 37 Ix_AR1 ActiveIntronRegion 0 22.83 36.77 32.97 14.62 26.60 21.78 27.29 36.90 31.22 52.86 31.74 24.86 22.32 32.01 34.91 27.10 30.99 58.48 41.95 82.70 12.86 14.14 15.49 38 Ix_SR1 SilentIntronRegion 0 15.35 14.03 17.55 6.11 10.89 6.92 9.99 18.99 12.91 24.49 30.54 12.90 16.55 18.99 31.25 28.74 24.72 24.32 14.09 22.71 8.44 11.79 17.14 39 ER3a ExonRegion 0 1.03 0.93 0.66 0.08 1.15 1.57 1.15 1.08 0.94 2.85 0.19 0.00 1.91 1.37 3.18 3.58 1.56 2.03 1.35 0.26 0.04 0.86 0.02 40 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 41 ER4a ExonRegion 0 0.59 0.57 0.00 0.00 0.00 0.51 0.74 0.72 0.00 0.03 1.08 1.99 0.00 1.01 1.24 0.83 3.16 0.51 2.66 0.00 0.61 0.00 0.00 42 E4a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 43 E4a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.77 0.00 0.00 0.00 0.00 0.00 0.00 44 E5_Aa NovelBoundary 1 6.82 0.00 3.19 0.00 25.13 5.39 8.30 1.97 1.39 2.58 237.17 6.30 6.17 100.77 176.28 75.71 276.58 0.00 0.00 0.00 0.00 2.69 65.13 45 ER5a ExonRegion 1 48.04 0.00 1.53 0.49 30.10 15.39 26.93 15.31 2.29 9.99 455.54 1.31 5.61 239.30 558.75 170.47 367.05 0.00 0.00 0.00 3.31 4.32 50.60 46 E5a_E6a KnownJunction 1 92.53 0.00 5.03 0.00 65.53 22.88 58.16 32.33 6.31 18.16 715.87 6.30 13.47 161.22 299.52 260.36 615.61 0.00 0.00 0.00 2.59 7.96 50.88 47 E6_Aa NovelBoundary 0 11.34 0.00 0.00 0.00 4.24 0.00 0.00 8.26 0.00 0.00 31.53 0.00 6.82 15.01 10.75 12.99 9.35 0.00 3.76 0.00 8.59 0.00 4.35 48 ER6a ExonRegion 1 26.12 1.34 2.45 1.79 20.11 7.44 16.42 26.32 4.91 14.12 301.75 6.43 18.49 70.16 112.07 94.43 236.53 0.00 0.00 0.00 1.13 2.68 21.56 49 E6a_E7a KnownJunction 0 3.78 3.35 0.00 4.46 4.33 0.00 0.00 11.54 3.44 3.28 74.81 5.40 20.45 38.55 51.30 16.58 68.07 0.00 0.00 0.00 0.00 2.39 11.87 50 ER7a ExonRegion 0 6.19 0.24 7.33 2.10 5.90 2.39 5.62 27.56 7.61 11.41 433.90 13.64 37.38 191.05 301.01 90.89 277.23 0.59 0.68 0.00 6.67 3.04 33.58 51 E7a_E8a KnownJunction 1 7.33 0.00 11.12 2.03 72.75 15.84 44.74 28.71 8.88 9.54 613.63 19.66 34.41 258.76 269.36 40.07 347.17 0.00 0.00 0.00 11.80 0.00 16.73 52 ER8a ExonRegion 1 18.66 0.00 13.10 7.42 27.02 17.30 27.64 32.00 16.34 17.85 595.13 43.03 48.69 227.10 259.29 88.43 321.56 1.24 0.00 0.00 5.42 2.82 29.65 53 E8_Da NovelBoundary 0 3.04 0.00 1.80 0.00 0.00 0.00 0.00 1.56 1.50 2.58 35.27 25.96 6.82 3.00 23.98 4.27 0.00 1.82 4.33 0.00 0.00 0.00 0.00 54 E8a_E9a KnownJunction 0 28.23 0.00 13.31 4.93 16.13 0.00 5.52 40.83 23.64 23.42 629.58 43.36 168.66 224.62 309.17 132.79 275.74 0.00 0.00 0.00 12.05 0.00 37.47 55 ER9a ExonRegion 0 36.52 0.51 12.20 8.66 20.70 9.52 10.22 43.89 29.30 21.41 683.82 46.79 82.63 341.89 376.80 119.91 358.65 1.93 0.00 0.00 8.96 3.02 35.73 56 E9a_E10a KnownJunction 0 42.23 0.00 9.02 7.62 24.79 23.79 8.70 44.44 33.74 30.41 639.69 45.01 105.35 366.89 449.84 153.98 373.73 4.89 0.00 0.00 7.91 2.69 31.41 57 ER10a ExonRegion 0 26.53 0.00 6.16 7.27 34.16 17.17 14.85 57.59 27.03 22.27 765.06 63.62 137.03 392.42 370.23 121.64 413.71 5.44 0.00 0.00 15.01 1.66 31.07 58 E10a_E11a KnownJunction 1 45.05 0.00 3.10 9.62 37.10 2.90 27.12 69.25 26.59 21.17 750.77 130.09 266.54 387.61 363.06 135.26 353.16 4.31 0.00 0.00 14.52 2.45 33.46 59 ER11a ExonRegion 0 13.46 0.98 5.78 3.63 23.63 2.96 13.29 37.40 16.73 24.66 466.32 52.59 114.07 304.79 322.50 81.33 284.82 1.48 0.00 0.00 7.54 2.46 30.67 60 E11a_E12a KnownJunction 1 0.00 2.89 2.87 3.43 3.65 4.77 21.29 24.77 18.58 20.95 368.72 66.02 84.25 158.99 185.43 50.50 189.43 0.00 0.00 0.00 7.66 0.00 18.78 61 ER12a ExonRegion 0 22.14 0.41 7.91 2.93 12.93 3.72 6.33 34.77 11.61 15.33 294.06 24.21 86.76 201.19 299.28 59.97 196.45 0.46 0.69 0.00 4.04 2.15 14.56 62 ER12b ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.24 0.00 3.87 0.00 0.00 4.87 5.80 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 63 IG32 Intergenic 0 4.44 0.17 1.68 1.19 3.59 2.46 2.22 4.75 3.71 4.16 17.35 8.20 23.28 44.48 46.27 12.96 51.50 0.85 2.40 0.00 0.18 0.17 6.16 64 IG32_AR1 ActiveIntergenicRegion 0 4.45 0.17 1.69 1.20 3.60 2.47 2.23 4.77 3.72 4.17 17.41 8.23 23.35 44.63 46.41 13.01 51.67 0.85 2.41 0.00 0.19 0.18 6.18