Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PIH1D1 Gene 0 182.95 123.46 193.68 80.23 75.69 69.29 41.91 110.42 92.77 233.23 278.46 73.12 52.37 260.81 299.26 242.84 263.23 191.38 167.04 178.62 112.06 131.75 119.00 2 416312 Transcript 0 47.01 13.24 36.83 15.85 33.66 21.93 13.41 32.35 31.51 51.80 44.53 10.14 4.16 50.11 36.39 43.44 37.84 40.18 32.34 20.39 18.15 21.62 19.96 3 262265 Transcript 0 166.39 113.92 232.86 88.01 74.46 55.15 37.71 129.51 107.29 284.99 308.32 92.04 71.05 313.41 363.47 257.44 304.34 201.90 155.79 206.16 129.55 150.97 129.54 4 IG9 Intergenic 0 6.24 3.08 1.38 1.23 3.84 3.33 1.10 1.75 2.23 1.68 10.66 5.39 1.81 12.15 9.36 8.08 6.24 1.94 4.57 4.66 4.00 2.20 5.99 5 IG9_AR2 ActiveIntergenicRegion 0 6.08 2.60 0.77 1.38 2.42 3.87 0.00 1.39 2.95 1.51 6.26 10.82 0.00 11.96 7.86 6.36 9.81 0.13 2.17 2.42 3.92 1.01 1.55 6 IG9_SR1 SilentIntergenicRegion 0 5.78 1.72 2.18 0.70 6.09 3.29 1.65 1.79 3.46 2.00 15.90 4.06 3.38 17.40 13.24 10.11 9.85 3.85 6.32 4.78 3.13 2.44 9.58 7 IG9_AR1 ActiveIntergenicRegion 0 21.73 14.91 0.38 3.80 4.88 9.17 2.78 5.44 4.41 3.72 17.33 11.59 3.91 19.11 12.73 14.63 6.90 3.43 9.03 10.87 10.36 7.55 7.90 8 ER1a ExonRegion 0 253.13 164.05 222.04 108.72 123.62 97.83 57.65 140.80 110.49 272.82 408.91 55.99 42.45 292.84 340.54 393.35 403.99 299.48 305.61 254.98 139.65 178.05 197.57 9 E1_Da NovelBoundary 0 13.41 7.89 16.62 11.95 61.88 16.18 19.56 8.42 9.06 16.09 11.85 0.00 6.82 7.65 17.92 19.40 17.20 16.25 12.05 9.01 4.82 5.33 0.00 10 E1a_E2a KnownJunction 0 73.27 180.43 272.31 68.56 237.18 236.00 138.05 108.72 91.35 252.26 325.98 37.06 64.61 233.09 344.27 178.16 228.89 138.83 97.98 190.92 136.22 69.07 67.95 11 I1 Intron 0 36.75 19.23 19.53 10.70 16.18 14.82 12.11 11.18 7.42 14.04 11.69 13.30 9.11 18.69 26.96 24.88 13.82 11.25 19.26 6.93 6.15 11.30 7.28 12 I1_SR1 SilentIntronRegion 0 49.19 15.97 25.26 13.56 19.31 10.25 7.59 10.00 10.49 17.09 4.03 16.27 10.68 21.29 20.52 29.04 14.64 5.19 33.85 5.10 3.50 14.41 5.84 13 I1_AR3 ActiveIntronRegion 0 33.77 33.67 34.62 13.96 23.13 26.00 20.01 21.43 12.23 19.10 25.84 23.33 14.70 33.42 53.42 48.97 18.30 16.57 28.31 9.74 9.26 23.31 14.59 14 E2_Aa NovelBoundary 0 415.78 132.28 101.71 75.48 100.59 46.05 40.32 65.18 52.49 109.25 86.18 43.51 27.27 77.82 101.86 85.28 88.55 47.75 90.26 25.31 35.65 39.19 19.38 15 ER2a ExonRegion 0 268.13 345.74 290.63 104.58 158.23 182.70 130.18 129.04 120.43 288.40 357.18 132.15 91.84 302.98 386.47 226.15 292.65 168.45 140.68 225.28 167.75 116.27 95.51 16 E2a_E3a KnownJunction 0 415.18 504.52 431.89 181.89 141.34 163.60 122.37 206.97 172.19 383.16 390.84 94.98 114.77 391.73 445.64 242.50 336.04 284.20 165.65 316.33 192.31 177.09 125.65 17 ER3a ExonRegion 0 407.29 256.19 346.75 126.10 88.91 107.03 56.13 162.05 150.96 384.24 421.44 143.62 109.77 454.69 563.15 373.28 412.61 331.36 244.44 298.15 183.35 204.79 183.64 18 E3_Da KnownBoundary 0 54.23 20.59 58.04 23.07 25.30 29.53 23.94 51.10 46.90 56.73 61.70 31.21 6.82 35.43 56.37 34.52 29.92 59.98 52.99 33.30 30.21 35.58 7.51 19 E3a_E4a KnownJunction 0 111.72 65.91 284.73 96.16 39.98 26.92 33.96 177.03 156.13 422.22 434.48 81.18 139.11 394.08 464.18 246.43 533.61 203.49 171.86 341.38 158.95 142.00 138.29 20 E3a_E5a NovelJunction 0 19.71 5.20 5.71 0.00 0.00 0.00 0.00 4.07 10.79 7.04 0.00 12.60 0.00 0.00 4.45 0.00 0.00 6.84 13.18 0.00 0.00 0.00 0.00 21 ER3b ExonRegion 0 47.01 13.24 36.83 15.85 33.66 21.93 13.41 32.35 31.51 51.80 44.53 10.14 4.16 50.11 36.39 43.44 37.84 40.18 32.34 20.39 18.15 21.62 19.96 22 E3_Db NovelBoundary 0 45.27 34.86 30.04 25.11 31.32 26.75 20.45 27.48 30.44 66.54 52.70 0.00 12.01 64.63 33.99 57.93 77.23 41.74 52.90 20.26 29.53 17.76 27.66 23 I3 Intron 0 52.54 17.81 22.37 12.33 24.55 14.85 12.86 18.72 13.16 21.21 31.28 8.73 5.77 36.51 30.69 36.49 32.94 17.22 19.33 15.77 11.89 12.09 14.66 24 I3_SR2 SilentIntronRegion 0 53.96 21.24 28.01 18.72 30.42 16.90 14.24 26.03 19.79 28.87 46.32 14.16 12.12 48.13 30.46 56.61 47.62 24.25 26.40 21.57 17.60 16.64 15.34 25 I3_AR4 ActiveIntronRegion 0 72.67 21.38 25.37 10.36 28.20 18.70 16.66 18.37 11.27 21.50 27.58 6.32 1.13 38.36 42.24 29.31 30.30 16.56 19.49 15.86 10.47 12.04 19.97 26 E4_Aa NovelBoundary 0 61.71 28.61 64.99 12.32 16.21 19.76 5.52 48.02 21.61 57.65 23.37 0.00 0.00 36.49 66.38 50.93 49.56 24.37 14.21 24.22 15.88 14.27 19.80 27 ER4a ExonRegion 0 127.50 74.62 292.41 94.74 53.13 35.55 34.68 143.10 136.74 360.76 443.66 119.55 82.98 390.39 424.52 242.66 429.22 200.39 142.42 293.99 169.33 155.79 120.69 28 E4_Da NovelBoundary 0 66.97 9.01 41.48 33.53 7.89 26.46 14.31 63.95 19.82 35.62 23.32 5.85 0.00 46.50 57.11 51.44 34.97 49.04 17.88 24.86 17.61 21.86 27.40 29 E4a_E5a KnownJunction 0 201.67 124.78 342.68 110.78 88.29 42.25 34.14 143.64 127.63 334.14 411.53 85.68 89.28 411.86 484.83 261.90 369.61 283.75 175.35 231.64 152.10 188.72 162.10 30 E5_Aa NovelBoundary 0 106.69 43.28 57.04 25.70 7.64 30.89 18.42 36.06 20.72 50.02 46.22 6.30 6.82 45.03 58.72 59.90 64.98 26.90 20.52 28.38 26.69 15.19 25.52 31 ER5a ExonRegion 0 243.19 175.58 358.33 137.93 115.12 113.94 64.86 185.09 150.02 416.77 452.02 156.07 87.91 461.92 541.76 434.95 412.29 410.49 244.73 300.18 181.78 199.28 206.28 32 E5a_E6a KnownJunction 0 436.97 389.40 415.60 186.46 253.40 187.73 108.60 243.04 182.09 540.65 629.42 246.08 182.78 659.43 965.33 697.17 631.79 503.99 414.98 461.93 267.62 322.82 378.84 33 E6_Aa NovelBoundary 0 44.01 9.80 42.34 10.82 7.64 5.45 21.42 15.98 14.24 29.04 19.64 0.00 0.00 9.83 16.56 12.22 23.09 10.74 27.01 15.98 12.05 15.25 20.66 34 ER6a ExonRegion 0 179.07 115.63 255.18 101.81 67.68 90.55 39.52 147.09 125.37 327.67 350.90 107.47 82.91 360.53 407.94 281.83 325.77 230.00 192.08 212.63 158.63 165.94 155.66 35 E6a_E7a KnownJunction 1 141.14 95.05 261.88 84.77 45.67 40.15 21.20 117.76 98.44 242.67 227.22 70.22 6.82 210.96 145.13 225.92 186.82 212.24 133.37 136.21 107.25 122.47 73.92 36 E7_Aa NovelBoundary 0 33.86 0.00 48.37 10.42 0.00 12.55 1.85 34.50 11.46 29.68 19.48 0.00 0.00 12.66 15.45 30.93 4.39 4.35 30.78 6.52 5.87 17.57 0.00 37 ER7a ExonRegion 0 141.44 94.67 208.72 89.00 60.45 29.32 36.11 108.28 87.17 228.88 229.28 57.82 27.21 287.38 338.19 236.91 237.06 139.48 144.43 148.63 109.11 149.27 98.49 38 E7a_E8a KnownJunction 0 99.35 72.09 123.95 52.51 74.96 16.41 24.29 99.60 90.05 193.27 148.09 37.81 13.31 188.12 174.79 162.18 186.82 92.57 65.32 117.86 80.00 61.36 95.01 39 ER8a ExonRegion 0 80.85 59.52 111.23 51.60 42.89 34.54 25.56 95.25 59.81 173.41 164.91 47.05 25.96 201.59 211.57 144.99 144.99 58.36 91.80 113.93 71.88 136.54 67.54 40 E8a_E9a KnownJunction 0 181.66 71.24 97.28 27.87 35.40 35.32 23.27 67.69 49.02 125.07 136.40 52.22 62.98 123.67 142.41 113.56 147.73 53.31 65.79 79.83 67.28 129.57 40.12 41 ER9a ExonRegion 0 52.07 28.60 42.31 22.48 16.53 9.10 6.39 26.55 24.97 54.34 71.95 43.29 51.37 70.99 61.04 40.83 46.42 34.69 27.37 35.71 30.69 37.85 17.48