Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 GLTSCR1 Gene 0 15.98 12.04 33.28 16.27 10.71 11.90 7.93 36.50 44.66 48.63 37.26 14.06 18.76 45.96 44.53 31.28 34.97 58.65 23.81 26.85 39.21 23.16 24.36 2 396720 Transcript 0 12.28 12.10 36.41 19.87 16.39 12.78 8.65 41.90 49.87 52.25 41.76 17.65 21.84 46.43 41.81 33.52 40.74 66.91 26.33 36.79 46.08 25.67 26.92 3 ER1a ExonRegion 0 0.19 1.19 0.00 0.00 0.49 0.13 3.10 0.00 0.00 0.07 0.09 0.00 0.00 3.02 2.47 3.48 3.87 0.21 0.00 0.29 1.29 1.22 0.00 4 E1_Da NovelBoundary 0 3.04 6.51 10.11 1.43 4.16 0.00 0.00 1.89 8.88 2.44 2.68 0.00 0.00 2.30 25.71 3.42 0.00 2.36 0.00 0.00 0.00 0.00 0.00 5 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 I1_AR2 ActiveIntronRegion 0 0.00 0.76 1.99 1.05 2.95 2.48 0.94 4.39 3.58 2.60 4.83 0.00 0.00 5.28 14.57 8.67 4.33 7.35 8.10 1.60 1.15 3.73 7.04 7 I1_AR3 ActiveIntronRegion 0 5.67 4.57 6.16 4.65 5.31 0.96 5.37 11.84 10.18 12.18 1.02 2.30 3.81 2.28 9.87 6.93 4.41 14.11 13.34 19.31 6.36 0.00 9.61 8 I1_AR4 ActiveIntronRegion 1 8.84 7.93 9.09 11.43 15.11 1.46 11.78 11.28 16.32 12.21 1.38 11.62 6.52 1.72 16.93 15.19 7.43 11.75 20.37 20.49 8.40 3.89 12.08 9 I1_SR4 SilentIntronRegion 0 5.62 3.55 10.28 8.22 4.38 2.49 5.86 11.66 14.24 10.24 0.83 1.99 4.80 1.51 8.22 10.18 6.08 15.76 12.26 13.74 5.52 0.61 10.83 10 I1_AR6 ActiveIntronRegion 0 4.71 3.74 16.64 13.60 6.38 1.29 9.12 11.23 16.11 14.85 0.81 1.93 0.54 3.26 9.60 12.93 4.89 25.88 12.30 17.86 3.84 1.47 15.73 11 I1_SR5 SilentIntronRegion 0 6.14 6.12 16.74 14.25 13.49 1.45 18.98 19.32 13.93 12.63 0.59 9.84 3.94 1.89 9.45 6.10 12.08 15.64 18.03 24.06 3.67 1.05 7.76 12 I1_AR7 ActiveIntronRegion 0 6.79 4.08 12.19 9.40 12.71 3.31 10.61 16.31 19.10 12.49 1.56 14.00 7.04 1.48 9.36 14.17 6.31 15.22 16.04 17.97 3.42 0.94 5.75 13 I1_SR6 SilentIntronRegion 0 9.16 3.91 5.31 2.96 5.20 1.32 5.56 4.42 7.19 7.06 0.00 2.78 3.92 1.36 8.58 7.94 3.30 15.51 9.27 18.53 3.18 0.50 13.42 14 I1_AR9 ActiveIntronRegion 0 4.23 0.00 11.03 5.45 5.35 0.00 17.51 9.60 15.51 10.83 0.00 4.33 4.69 1.26 2.90 13.21 17.60 4.52 8.49 27.19 5.88 1.16 2.94 15 I1_AR10 ActiveIntronRegion 1 7.74 2.03 16.62 11.41 7.19 0.57 22.76 13.40 19.41 15.84 0.00 6.09 7.47 1.62 10.34 19.97 21.56 15.07 17.22 42.35 7.16 2.08 5.60 16 I1_AR11 ActiveIntronRegion 0 6.08 5.66 14.99 12.68 15.29 3.60 11.93 16.06 22.82 13.25 0.70 8.04 6.03 1.57 6.14 17.26 12.08 22.79 19.41 29.26 10.51 1.99 14.62 17 I1_AR12 ActiveIntronRegion 0 15.05 12.93 12.44 13.22 7.69 0.56 9.22 16.37 13.65 13.71 0.00 6.59 5.68 1.46 6.51 18.44 8.99 20.15 8.68 17.07 5.00 0.95 11.55 18 I1_SR8 SilentIntronRegion 0 14.95 3.63 11.40 14.37 11.58 1.55 9.73 11.35 16.11 12.77 0.00 4.80 3.26 0.88 3.15 10.40 4.45 16.07 2.98 19.84 2.63 3.71 9.90 19 I1_AR13 ActiveIntronRegion 0 11.36 5.51 15.70 13.65 11.10 1.82 10.23 17.52 18.65 13.24 0.53 5.29 6.50 1.87 9.52 12.54 7.11 19.70 7.16 25.01 8.55 1.26 12.49 20 I1_SR9 SilentIntronRegion 0 11.14 10.44 9.81 9.95 7.45 1.47 6.58 14.66 14.61 11.74 0.63 2.56 4.14 1.21 8.32 10.03 5.28 13.12 9.21 14.07 5.46 0.63 9.20 21 I1_AR14 ActiveIntronRegion 0 13.61 6.53 16.45 16.24 8.08 4.00 9.39 23.83 24.60 12.56 1.28 6.57 5.81 1.54 7.93 15.91 8.05 16.15 10.21 24.86 7.69 1.11 9.59 22 I1_AR15 ActiveIntronRegion 0 8.79 10.61 14.51 13.24 15.15 1.43 8.58 15.67 14.74 14.48 1.31 5.07 4.07 0.90 9.30 12.03 9.95 13.95 9.70 29.41 11.57 1.70 10.54 23 I1_AR16 ActiveIntronRegion 1 17.84 8.18 10.39 12.83 15.23 5.02 8.65 18.46 25.61 12.61 2.04 6.17 2.44 1.37 18.27 16.91 9.74 15.87 22.15 28.70 6.04 0.88 9.90 24 I1_SR11 SilentIntronRegion 0 12.12 7.68 10.27 10.92 9.55 1.94 8.94 16.01 15.86 12.47 0.81 6.41 6.52 1.62 8.58 10.95 6.06 14.25 9.08 16.80 5.22 1.78 11.18 25 ER2a ExonRegion 0 7.26 2.03 4.73 4.32 10.34 10.81 3.17 10.42 14.74 17.38 12.32 5.94 5.75 16.72 22.24 8.77 12.72 19.51 7.18 19.84 16.18 3.13 14.77 26 E2a_E3a KnownJunction 0 0.00 0.00 7.81 6.13 0.00 0.00 4.02 23.95 18.87 27.37 14.27 12.30 6.17 14.19 31.03 3.59 22.07 22.92 4.80 20.07 30.77 0.00 14.08 27 ER3a ExonRegion 1 1.38 0.00 12.36 6.67 0.00 0.20 4.49 46.63 37.43 49.62 46.31 4.24 7.04 38.31 25.04 21.00 52.02 19.52 17.38 41.21 51.36 13.23 16.41 28 E3_Da NovelBoundary 0 3.78 0.00 3.67 0.00 4.33 0.00 2.25 2.22 2.84 1.67 2.63 0.00 0.00 0.00 0.00 3.25 0.00 18.78 0.00 3.26 11.74 0.00 12.38 29 E3a_E4a KnownJunction 1 7.48 0.00 18.51 7.99 0.00 0.00 0.00 53.93 47.34 45.50 77.12 6.15 6.82 60.57 44.63 25.38 97.99 29.68 16.00 73.70 68.88 35.15 28.94 30 ER4a ExonRegion 0 3.59 0.00 22.43 9.13 2.61 3.50 1.42 45.46 44.75 57.48 44.28 22.15 7.31 45.48 56.27 47.97 61.26 60.72 29.11 71.94 47.76 39.30 29.91 31 E4_Da NovelBoundary 0 3.78 0.00 1.83 2.06 8.57 0.00 7.51 0.00 5.47 1.64 2.58 0.00 0.00 2.12 0.00 4.36 13.46 2.45 18.17 7.99 5.68 0.00 12.55 32 E4a_E5a KnownJunction 0 6.82 0.00 26.67 12.12 3.40 8.63 4.42 29.29 42.77 55.87 34.22 40.06 6.33 40.38 45.00 78.27 37.59 78.31 38.12 71.91 35.77 49.35 29.11 33 E5_Aa NovelBoundary 0 3.56 0.00 7.84 2.90 0.00 2.44 1.90 4.56 5.76 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13.18 3.76 11.76 0.00 0.00 19.29 34 ER5a ExonRegion 0 4.81 3.14 22.35 11.58 11.23 6.53 4.09 23.62 34.75 50.85 31.63 13.12 7.18 38.63 32.40 34.99 22.46 93.87 23.89 48.45 36.23 16.98 32.66 35 E5_Da NovelBoundary 0 0.00 3.29 0.00 7.62 0.00 0.00 0.00 6.74 1.79 6.34 2.47 0.00 0.00 0.00 0.00 0.00 4.77 20.15 4.80 3.00 5.31 5.20 15.19 36 E5a_E6a KnownJunction 0 0.00 5.85 20.64 18.35 45.93 14.37 1.94 16.80 25.61 56.57 35.64 24.16 18.02 44.03 48.83 28.80 16.83 67.20 7.25 45.45 48.31 12.37 54.80 37 I5_AR1 ActiveIntronRegion 0 13.27 4.25 8.40 8.49 6.71 3.83 12.73 12.92 16.16 7.86 1.62 7.24 3.23 2.84 9.27 9.94 8.28 8.83 6.66 8.89 5.53 4.35 8.59 38 E6_Aa NovelBoundary 0 18.45 15.85 12.30 11.92 25.04 9.71 26.59 20.41 17.97 13.00 0.00 0.00 0.00 0.00 5.69 7.01 0.00 14.22 9.22 11.70 4.88 2.45 13.06 39 ER6a ExonRegion 0 6.90 5.60 23.35 7.34 5.98 8.40 5.32 27.14 35.65 42.17 38.06 13.31 17.77 51.11 37.34 27.61 35.28 65.05 21.27 25.67 39.32 19.56 24.19 40 E6_Da NovelBoundary 0 0.00 0.00 9.79 3.43 4.16 5.00 0.00 0.00 3.39 12.71 2.68 0.00 0.00 0.00 0.00 0.00 4.11 8.04 0.00 21.35 3.15 2.27 8.02 41 E6a_E7a KnownJunction 0 0.00 2.96 0.00 2.06 0.00 0.00 0.00 2.42 2.55 1.50 20.06 6.30 6.82 20.13 5.19 27.94 17.95 5.02 0.00 0.00 31.88 9.00 0.00 42 E6a_E8a NovelJunction 0 0.00 0.00 1.63 0.00 0.00 0.00 0.00 0.00 13.45 22.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10.61 8.00 3.00 0.00 0.00 0.00 43 I6 Intron 1 2.12 2.22 5.64 4.62 1.46 2.33 4.21 4.68 7.53 8.08 1.23 0.65 1.05 2.52 13.27 2.97 2.40 10.36 7.24 10.44 5.21 1.33 9.88 44 I6_SR1 SilentIntronRegion 1 2.12 2.23 5.66 4.63 1.46 2.34 4.23 4.70 7.56 8.11 1.23 0.65 1.06 2.52 13.31 2.98 2.40 10.39 7.27 10.48 5.23 1.33 9.91 45 ER7a ExonRegion 0 4.88 1.94 1.58 0.65 0.00 0.53 2.29 4.41 7.45 5.66 29.44 15.17 18.20 37.84 36.03 9.37 25.40 7.30 5.70 3.03 28.64 7.20 10.15 46 E7a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.68 2.98 0.00 4.58 5.85 0.00 14.48 0.00 10.85 3.55 0.00 0.00 0.00 2.47 2.57 0.00 47 ER8a ExonRegion 0 2.71 3.38 4.82 2.73 1.73 2.28 1.29 8.16 8.11 13.74 10.06 5.98 7.65 17.95 15.60 9.69 10.13 11.72 9.84 11.40 17.39 4.70 6.40 48 E8a_E9a KnownJunction 0 7.26 6.71 11.65 11.29 21.56 12.83 6.40 21.52 11.02 37.69 33.80 17.41 6.82 37.08 10.75 3.76 21.22 24.00 44.99 18.54 35.21 2.82 16.39 49 ER9a ExonRegion 0 2.88 8.28 14.07 7.08 7.11 7.22 4.97 17.70 12.85 26.28 23.33 8.95 12.44 23.62 31.64 20.28 18.55 26.90 14.66 15.46 19.59 11.93 10.71 50 E9a_E10a KnownJunction 0 0.00 13.02 31.81 18.61 3.31 5.51 6.09 33.48 14.73 36.69 31.48 18.01 35.39 39.50 19.90 23.67 30.57 62.06 30.21 21.67 36.33 11.39 35.00 51 ER10a ExonRegion 0 17.03 14.14 41.34 23.27 15.06 14.30 12.37 46.97 52.64 49.80 45.25 14.88 19.19 61.04 37.06 29.96 50.59 87.60 39.99 29.01 48.40 28.45 26.16 52 E10_Da NovelBoundary 0 0.00 0.00 6.65 3.03 4.33 0.00 2.12 2.34 4.57 1.32 0.00 0.00 0.00 2.47 0.00 0.00 0.00 4.35 0.00 3.26 8.40 0.00 10.84 53 E10a_E11a KnownJunction 0 20.82 20.85 61.38 32.96 42.87 28.51 16.56 49.12 66.46 72.37 89.76 25.36 30.36 63.45 46.11 54.69 46.94 104.21 32.00 62.06 58.07 38.03 22.79 54 I10 Intron 0 2.76 0.74 7.16 2.65 2.94 1.44 2.35 4.44 4.14 4.82 0.51 0.75 2.51 1.60 6.98 2.80 4.48 7.97 5.33 4.22 7.14 1.74 10.28 55 I10_SR1 SilentIntronRegion 0 2.77 0.75 7.17 2.66 2.94 1.44 2.36 4.45 4.14 4.83 0.51 0.75 2.51 1.60 6.99 2.80 4.49 7.99 5.34 4.23 7.15 1.75 10.31 56 ER11a ExonRegion 0 17.21 24.34 52.37 34.20 36.64 26.03 16.68 60.19 71.16 66.93 67.56 34.85 43.95 55.22 57.42 37.68 53.88 106.57 32.93 48.66 53.64 36.63 24.72 57 E11_Da NovelBoundary 0 3.78 0.00 6.56 4.56 4.33 0.00 12.19 2.55 10.73 4.08 7.69 0.00 6.49 4.83 6.30 8.03 20.20 14.47 4.52 2.68 15.32 6.25 19.12 58 E11a_E12a KnownJunction 0 40.60 32.69 67.62 43.32 37.86 35.83 23.67 91.88 97.66 88.78 55.28 24.31 34.41 53.27 51.80 31.10 43.57 122.45 26.35 41.16 93.65 51.62 28.00 59 I11 Intron 0 6.24 3.57 10.04 3.56 5.97 2.78 3.80 7.18 11.74 9.53 7.09 4.79 5.06 7.56 7.49 12.32 9.47 14.64 8.38 8.48 5.96 4.49 7.96 60 I11_SR1 SilentIntronRegion 0 6.26 3.58 10.07 3.57 5.99 2.79 3.81 7.21 11.77 9.56 7.11 4.80 5.07 7.58 7.52 12.35 9.49 14.68 8.40 8.50 5.98 4.50 7.98 61 E12_Aa NovelBoundary 0 18.00 15.46 36.63 9.19 3.90 17.55 0.00 25.42 34.78 28.85 6.74 18.46 6.66 22.66 27.44 19.82 9.44 42.53 30.97 5.31 15.51 5.45 10.76 62 ER12a ExonRegion 0 33.95 27.49 75.62 37.07 38.72 27.86 17.78 75.99 102.54 86.90 65.98 26.21 49.83 82.96 61.55 58.70 67.68 114.30 51.67 52.82 86.02 54.77 41.27 63 E12a_E13a KnownJunction 0 36.90 38.74 105.88 57.30 47.03 43.44 26.81 72.45 122.28 127.57 58.44 48.47 65.09 101.30 85.54 75.45 74.71 148.36 57.41 51.26 105.52 44.70 66.67 64 ER13a ExonRegion 0 31.61 34.16 84.36 42.97 32.11 28.38 16.05 85.93 113.66 97.68 74.16 47.81 41.22 84.20 78.03 79.62 81.45 129.05 47.18 68.11 83.05 56.67 55.21 65 E13_Da NovelBoundary 0 3.26 0.00 1.36 2.00 4.07 0.00 2.25 6.16 8.74 9.72 2.16 0.00 0.00 14.13 6.30 11.71 9.07 11.36 9.60 0.00 8.15 0.00 15.37 66 E13a_E14a KnownJunction 0 28.23 39.20 90.77 49.51 31.24 25.55 7.77 112.46 131.10 96.94 63.44 24.61 63.63 75.64 80.97 46.40 60.59 157.48 53.74 73.82 70.18 67.66 56.68 67 E14_Aa NovelBoundary 0 0.00 0.00 7.69 3.40 0.00 0.00 1.72 4.35 3.04 2.98 2.68 0.00 0.00 6.95 4.45 0.00 4.77 7.50 25.88 0.00 3.15 5.88 11.69 68 ER14a ExonRegion 1 28.58 23.73 105.56 45.01 39.46 23.27 22.85 94.46 134.28 116.57 81.54 17.78 56.78 92.86 87.29 69.48 83.74 169.98 72.24 61.83 78.22 54.03 61.18 69 E14_Da NovelBoundary 0 3.78 0.00 3.02 3.83 0.00 0.00 1.77 4.81 10.21 7.06 2.68 0.00 6.82 2.47 4.45 4.36 3.46 5.93 8.28 6.14 0.00 14.21 4.35 70 E14a_E15a KnownJunction 0 14.37 20.59 97.87 56.44 25.98 18.51 25.53 106.50 131.05 121.31 81.02 13.05 39.28 85.47 101.00 63.23 90.88 144.22 51.48 60.53 69.81 41.27 45.16 71 I14 Intron 0 11.06 3.24 6.33 3.02 6.47 4.14 5.46 9.35 9.21 6.58 6.17 3.85 5.92 6.07 7.48 11.28 6.72 7.07 4.91 6.44 5.82 6.76 7.59 72 I14_SR1 SilentIntronRegion 0 11.08 3.25 6.34 3.02 6.48 4.14 5.47 9.36 9.22 6.59 6.17 3.86 5.93 6.08 7.49 11.29 6.73 7.08 4.92 6.44 5.82 6.77 7.60 73 E15_Aa NovelBoundary 0 28.45 3.16 8.63 7.79 19.61 2.44 2.21 8.46 14.35 6.74 10.42 6.30 6.82 7.36 19.04 36.23 31.04 5.72 13.74 8.44 6.24 6.12 7.85 74 ER15a ExonRegion 0 30.73 20.97 50.31 28.27 14.69 17.91 11.78 52.60 61.75 65.99 42.04 15.37 20.01 47.95 61.27 40.31 38.03 62.18 28.16 28.95 42.49 30.75 29.24