Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 POLD1 Gene 0 34.25 47.58 238.67 70.51 34.36 32.96 49.55 111.62 58.34 189.13 233.91 47.16 25.41 253.01 249.60 197.27 201.19 274.21 79.91 117.58 32.77 28.11 32.95 2 440232 Transcript 0 56.16 40.49 53.23 16.23 56.20 21.10 73.38 22.28 10.56 43.84 90.05 9.15 10.23 77.23 139.86 136.42 128.42 118.12 81.32 30.30 20.97 23.09 15.66 3 262266 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 376930 Transcript 0 0.00 0.00 4.76 0.00 3.99 0.00 2.21 6.61 1.24 7.28 2.68 0.00 0.00 0.00 0.00 0.00 4.68 2.57 0.00 0.00 0.00 0.00 0.00 5 391817 Transcript 0 1.39 3.92 17.40 3.01 6.65 2.89 7.88 8.15 9.73 17.30 18.77 0.33 0.06 12.06 10.25 11.28 13.95 15.68 1.73 11.01 2.25 2.16 0.85 6 ER1a ExonRegion 0 0.00 0.00 0.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.53 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 ER1b ExonRegion 1 19.92 18.35 25.51 5.77 21.61 14.67 45.39 6.56 5.61 27.56 63.09 7.55 8.54 61.26 134.28 78.80 86.16 42.97 48.35 16.86 13.39 18.70 6.17 8 E1a_E2a KnownJunction 0 14.00 0.00 9.17 3.63 0.00 13.00 14.97 2.22 0.00 12.76 9.69 0.00 6.66 7.89 17.80 12.30 17.58 16.04 8.56 3.26 3.15 6.06 0.00 9 E1a_E2b KnownJunction 0 112.32 80.97 105.85 32.46 112.39 42.19 146.75 44.57 21.12 87.68 180.10 18.31 20.45 154.45 273.19 272.83 256.85 236.24 162.64 60.59 41.95 46.17 31.33 10 I1_AR1 ActiveIntronRegion 0 7.09 3.18 7.51 4.60 8.41 1.28 3.55 16.52 16.95 14.72 3.14 0.44 0.00 1.50 13.12 4.78 8.55 18.81 4.84 19.18 3.15 0.00 2.66 11 ER2a ExonRegion 0 16.93 8.13 15.01 4.77 11.37 11.00 28.80 4.32 3.09 21.22 34.31 4.33 3.52 36.95 63.10 51.27 51.99 24.48 30.26 11.70 9.92 11.46 2.94 12 ER2b ExonRegion 0 12.41 22.23 132.24 43.33 17.49 14.09 29.99 72.71 41.85 140.19 200.50 44.04 20.57 166.04 171.00 198.26 194.02 249.41 111.16 80.24 32.01 29.72 31.26 13 E2a_E3a KnownJunction 1 17.86 52.56 287.81 87.23 3.48 25.61 18.37 125.73 62.73 224.73 156.46 94.98 28.41 235.21 278.51 502.69 115.57 677.31 216.01 111.92 29.10 45.13 39.35 14 ER3a ExonRegion 0 19.33 46.13 188.36 46.92 89.38 48.16 103.15 100.84 47.83 139.75 179.76 44.47 34.64 212.47 187.33 227.19 168.00 378.84 100.51 91.13 26.95 32.13 43.35 15 E3a_E4a KnownJunction 1 32.15 87.75 164.57 28.40 37.44 34.53 114.07 84.57 46.24 139.12 184.57 54.32 15.10 209.67 159.59 85.19 231.88 153.96 48.75 91.08 37.99 28.84 19.55 16 ER4a ExonRegion 0 39.98 55.46 148.19 24.46 16.93 16.45 40.51 63.87 33.68 132.73 169.74 38.46 16.34 201.67 164.19 117.55 163.00 183.54 59.70 79.94 25.17 28.29 14.90 17 E4a_E5a KnownJunction 0 43.19 17.96 187.43 32.00 11.97 41.68 32.77 97.43 51.56 147.28 198.95 45.31 32.95 252.11 209.16 147.23 138.01 247.89 65.32 70.05 19.58 33.00 16.39 18 ER5a ExonRegion 0 21.50 17.38 162.86 26.68 8.54 25.82 17.80 62.42 44.32 153.79 172.03 35.98 15.71 217.09 163.92 133.93 143.72 187.28 49.12 80.12 13.82 21.96 15.34 19 E5a_E6a KnownJunction 0 27.93 33.22 202.00 45.82 24.28 14.99 23.45 52.57 41.15 177.05 204.47 21.61 6.82 206.02 171.58 241.05 136.98 179.91 37.46 112.56 10.63 20.27 16.05 20 ER6a ExonRegion 0 18.81 27.54 190.07 40.65 17.35 14.56 30.22 71.12 46.09 155.26 210.27 27.82 16.93 237.03 194.26 177.61 180.94 208.78 50.70 94.99 22.68 23.71 23.67 21 E6a_E7a KnownJunction 1 46.16 49.14 280.74 65.63 51.78 33.50 49.11 130.37 55.76 203.53 271.02 5.85 39.45 331.86 268.00 194.99 235.25 362.59 65.98 131.48 17.98 17.27 48.49 22 ER7a ExonRegion 0 31.08 51.04 270.61 73.61 45.81 41.13 59.64 111.70 67.27 208.69 260.47 28.41 25.80 301.81 260.26 187.24 240.12 319.39 77.73 127.63 28.81 37.05 38.03 23 E7a_E8a KnownJunction 1 47.93 44.53 283.64 74.18 85.65 68.99 81.57 123.72 84.43 244.69 319.87 36.91 6.82 305.14 262.93 188.84 311.92 312.81 81.98 165.55 30.46 19.35 27.57 24 ER8a ExonRegion 0 22.74 31.33 259.65 67.24 39.95 46.83 52.65 131.72 68.93 206.86 265.97 48.26 32.87 278.74 273.07 200.25 239.85 371.51 90.17 132.29 32.89 30.32 42.13 25 E8a_E9a KnownJunction 0 32.67 49.27 327.37 82.67 62.73 40.60 67.83 107.66 87.12 246.08 210.11 44.41 25.81 396.91 481.24 319.57 239.92 410.68 129.42 167.40 33.61 39.50 36.36 26 ER9a ExonRegion 0 27.11 52.01 264.75 65.08 41.16 37.21 54.93 137.24 66.10 231.54 264.31 44.62 24.60 336.10 261.48 220.17 239.46 383.13 105.77 147.50 35.97 26.94 31.78 27 E9a_E10a KnownJunction 0 93.65 115.11 380.68 94.36 107.98 88.98 152.89 202.29 70.49 321.86 343.98 83.58 52.43 390.37 297.55 341.36 293.50 448.03 165.65 176.60 34.35 25.17 53.27 28 ER10a ExonRegion 0 36.28 64.94 326.59 96.86 51.73 63.29 90.66 164.47 66.63 264.45 317.01 87.46 59.68 390.42 299.88 287.93 287.05 415.55 106.79 150.13 57.13 34.43 44.02 29 E10a_E11a KnownJunction 0 36.30 77.03 365.69 114.37 76.32 56.10 63.73 173.91 75.64 268.49 310.45 91.08 52.59 347.17 264.91 327.61 305.28 489.90 151.06 145.48 45.72 34.11 37.05 30 ER11a ExonRegion 0 35.34 52.27 286.33 90.22 23.65 34.52 51.27 142.15 62.88 224.29 309.40 125.12 51.46 341.23 240.99 296.81 285.33 363.64 101.73 137.01 46.26 25.19 43.99 31 E11a_E12a KnownJunction 0 44.97 85.77 300.99 119.07 43.38 56.39 56.75 140.47 72.13 219.19 326.19 103.53 33.28 236.68 184.56 288.04 261.90 379.26 91.01 108.66 37.19 41.46 44.73 32 ER12a ExonRegion 0 30.01 76.01 313.04 100.53 43.34 48.42 67.43 134.49 67.20 241.57 346.44 123.45 45.84 317.39 267.67 284.87 279.62 398.15 98.72 131.36 40.92 29.88 45.56 33 E12a_E13a KnownJunction 1 52.16 102.28 300.82 103.42 76.15 48.32 76.14 152.92 87.01 247.86 299.18 165.20 32.14 311.09 305.83 362.73 370.73 421.12 108.24 158.45 71.35 29.45 54.29 34 ER13a ExonRegion 0 32.37 50.97 229.10 65.33 27.76 30.46 50.19 95.65 53.40 180.57 254.64 73.24 32.73 289.91 274.21 201.86 212.44 228.11 77.11 119.56 38.30 32.47 27.53 35 E13a_E14a KnownJunction 0 46.38 57.29 350.82 81.51 36.76 34.58 39.13 124.45 88.97 232.76 315.76 41.86 14.28 160.81 271.96 239.17 240.67 272.47 95.25 130.52 39.85 19.84 27.06 36 ER14a ExonRegion 0 49.96 43.28 314.73 88.17 38.93 40.38 55.87 125.81 79.20 227.83 310.02 41.54 21.66 297.94 311.15 236.67 260.29 347.09 95.53 150.85 41.08 32.94 32.11 37 E14a_E15a KnownJunction 0 0.00 2.70 15.49 3.20 7.30 2.38 10.29 5.50 10.62 16.57 18.64 0.00 0.00 11.89 5.19 11.79 9.26 9.33 0.00 13.61 3.03 0.00 0.00 38 E14a_E15b KnownJunction 0 69.94 55.19 356.82 139.08 42.44 49.40 87.40 187.50 87.01 264.46 345.67 56.72 22.56 279.48 291.12 336.41 288.92 497.98 121.79 200.51 47.14 52.23 34.83 39 ER15a ExonRegion 0 2.79 5.15 19.31 2.83 6.00 3.39 5.46 10.79 8.83 18.03 18.91 0.66 0.12 12.23 15.31 10.76 18.64 22.03 3.47 8.40 1.48 4.33 1.71 40 E15_Ab KnownBoundary 0 10.59 0.00 22.65 3.36 11.21 8.12 3.93 18.28 9.00 32.48 12.11 0.00 0.00 10.18 13.35 15.30 4.39 24.42 20.80 3.26 0.00 0.00 11.35 41 ER15b ExonRegion 0 58.42 86.08 382.01 112.23 52.13 64.10 74.35 162.49 85.74 260.79 353.37 68.00 37.04 339.15 291.18 265.85 260.32 446.87 134.66 167.97 45.02 42.33 42.38 42 E15a_E16a KnownJunction 0 77.72 90.25 363.26 94.43 85.99 41.68 93.93 149.47 81.13 268.27 365.99 88.83 19.15 304.02 369.12 300.43 281.63 388.13 100.43 148.03 48.99 32.64 49.85 43 ER16a ExonRegion 0 49.52 76.26 300.10 92.45 59.55 44.88 66.92 134.32 69.52 237.62 282.32 55.14 26.62 323.31 303.51 259.49 240.24 342.17 115.37 156.14 48.09 35.44 50.26 44 E16a_E17a KnownJunction 0 52.31 84.33 358.27 86.94 65.87 83.42 83.03 140.60 84.72 242.32 263.54 68.42 19.64 372.83 350.33 236.95 268.35 342.86 76.43 139.66 46.02 38.39 34.15 45 ER17a ExonRegion 0 46.66 70.05 264.13 75.23 37.50 49.82 73.67 130.19 68.78 224.75 209.38 30.07 15.94 301.74 289.62 224.01 214.31 268.39 84.56 123.50 36.84 27.92 27.66 46 E17_Da NovelBoundary 0 0.00 0.00 7.78 7.42 0.00 8.63 4.50 7.23 1.33 7.09 4.53 0.00 0.00 5.00 9.15 0.00 12.06 15.17 0.00 4.99 0.00 2.45 12.38 47 E17a_E18a KnownJunction 0 71.27 88.41 328.58 85.47 68.85 64.39 113.01 188.16 73.29 271.44 282.70 24.61 21.10 307.73 336.61 252.93 236.00 322.76 128.00 138.00 40.34 29.70 34.83 48 ER18a ExonRegion 0 55.23 74.67 360.37 96.67 79.97 40.90 78.04 181.99 94.70 271.80 302.86 58.94 22.38 353.84 337.88 254.55 238.56 411.49 120.08 168.04 41.96 45.21 57.94 49 E18a_E19a KnownJunction 0 80.83 75.64 456.13 143.84 45.33 44.63 72.43 177.60 108.10 273.43 311.55 77.13 61.36 294.72 286.67 260.70 278.35 417.60 60.80 185.04 38.49 55.66 37.30 50 ER19a ExonRegion 0 52.81 65.97 383.51 107.23 35.91 43.49 67.61 208.92 104.99 288.14 347.03 63.69 46.59 300.10 364.49 289.48 260.34 359.01 101.77 181.62 41.28 46.00 47.39 51 E19a_E20a KnownJunction 0 86.09 106.82 472.07 136.71 71.14 50.20 99.76 248.70 101.27 273.27 406.31 48.47 48.70 392.43 365.41 377.68 337.26 420.25 161.04 183.12 38.55 43.97 58.73 52 ER20a ExonRegion 0 56.02 64.84 355.99 95.59 49.00 47.02 56.62 177.91 83.07 249.22 291.14 58.50 38.96 304.70 335.59 272.71 218.03 361.06 91.04 158.29 36.67 35.67 48.70 53 E20a_E21a KnownJunction 1 58.60 40.78 262.08 70.15 23.09 47.36 58.47 169.80 64.09 215.27 170.94 35.86 40.09 250.46 239.82 261.04 169.33 251.62 66.17 113.90 33.11 21.98 30.56 54 ER21a ExonRegion 0 53.30 32.60 275.68 85.55 29.71 38.04 43.08 120.10 67.83 206.67 225.59 51.76 35.74 279.23 300.54 200.36 191.21 319.18 83.46 120.25 36.77 18.25 47.56 55 E21_Da NovelBoundary 0 25.71 2.89 43.46 13.65 3.82 2.61 14.00 22.02 17.33 29.39 7.21 0.00 6.17 9.54 19.66 26.66 12.81 39.63 8.85 2.36 3.15 0.00 3.50 56 E21a_E22a KnownJunction 0 68.90 39.07 212.83 71.89 11.29 16.13 26.76 76.69 47.71 176.64 248.27 31.36 32.79 231.09 254.65 219.34 191.49 213.03 54.03 101.50 38.49 28.96 15.37 57 E21a_E23a KnownJunction 0 0.00 0.00 4.76 0.00 3.99 0.00 2.21 6.61 1.24 7.28 2.68 0.00 0.00 0.00 0.00 0.00 4.68 2.57 0.00 0.00 0.00 0.00 0.00 58 ER22a ExonRegion 0 29.08 38.42 196.71 72.07 23.59 30.98 30.76 87.68 41.93 164.79 200.03 18.62 22.04 204.91 260.86 168.60 175.14 208.44 50.93 103.59 30.47 15.15 32.53 59 E22_Da NovelBoundary 0 7.56 2.70 52.19 9.06 24.11 2.10 15.06 40.25 8.10 29.63 31.69 12.60 13.47 24.02 13.35 15.89 23.56 39.84 4.80 0.00 2.59 0.00 0.00 60 E22a_E23a KnownJunction 1 51.42 63.94 216.88 108.51 26.40 19.99 30.47 85.56 53.21 183.17 219.11 12.60 12.99 185.36 261.95 149.88 188.69 206.19 49.70 89.74 33.17 7.23 39.44 61 I22 Intron 0 6.69 3.22 44.03 12.65 9.26 7.25 9.68 28.51 13.83 42.06 25.03 9.09 10.33 31.50 30.43 29.09 25.77 41.39 17.00 10.94 4.57 2.27 6.97 62 I22_SR1 SilentIntronRegion 0 7.67 3.88 53.23 15.47 11.37 8.06 10.43 34.33 17.12 52.46 28.62 7.97 13.33 35.46 33.90 35.58 28.17 51.07 20.92 12.04 4.96 2.48 7.94 63 I22_AR1 ActiveIntronRegion 0 2.93 2.78 37.15 9.47 6.64 7.52 10.75 24.92 9.08 25.06 21.71 23.96 3.36 23.39 23.74 16.79 35.21 28.24 6.58 13.16 3.75 3.54 8.96 64 E23_Aa NovelBoundary 0 3.04 5.92 52.78 19.48 8.66 5.28 8.13 38.03 12.12 32.42 14.48 0.00 0.00 18.89 4.82 13.24 25.81 54.39 11.67 19.56 0.00 3.12 4.35 65 ER23a ExonRegion 1 38.48 49.46 224.10 84.22 36.43 18.96 38.43 97.73 51.55 178.04 218.30 21.09 6.38 213.11 301.47 129.03 189.79 163.06 50.61 133.35 32.96 22.56 38.04 66 E23a_E24a KnownJunction 0 34.38 52.75 221.96 109.58 32.60 18.68 48.58 145.16 54.22 191.10 221.58 39.01 32.47 183.71 330.80 119.11 154.46 194.04 59.01 125.79 27.86 24.92 38.75 67 ER24a ExonRegion 0 36.87 44.15 232.92 94.09 19.90 28.73 41.30 102.18 54.02 192.18 215.35 21.65 16.46 202.72 318.88 164.30 172.49 195.47 45.10 120.81 28.80 18.88 26.64 68 E24a_E25a KnownJunction 1 32.08 38.41 216.76 112.27 27.25 23.79 36.39 121.21 60.18 197.52 231.27 30.16 0.00 146.21 251.44 145.09 193.17 206.48 29.08 129.75 21.56 19.84 27.15 69 I24_SR1 SilentIntronRegion 0 11.64 4.41 8.85 3.37 5.05 4.28 6.88 5.95 0.24 5.80 15.03 4.81 3.52 9.79 12.17 5.78 0.00 7.34 3.01 6.80 0.00 0.00 8.24 70 ER25a ExonRegion 1 23.28 38.45 227.55 108.90 39.03 22.73 40.87 120.14 63.01 188.57 244.93 18.13 1.68 236.11 286.18 120.06 181.42 195.90 57.82 147.01 28.11 25.79 21.72 71 E25a_E26a KnownJunction 1 31.04 41.05 263.33 116.47 37.69 18.74 67.08 119.73 70.54 196.17 223.11 11.10 14.12 248.04 319.18 161.07 188.97 209.46 69.46 167.08 35.34 33.25 28.34 72 ER26a ExonRegion 1 33.71 40.24 206.01 93.82 34.73 12.31 29.48 87.76 52.06 161.46 179.05 12.59 4.98 188.93 263.45 140.18 166.22 135.96 56.17 92.49 27.88 28.68 15.31 73 E26a_E27a KnownJunction 1 39.78 46.90 153.13 109.88 22.75 6.81 38.86 67.61 49.71 158.89 133.45 25.81 12.82 89.82 213.98 92.20 151.38 92.57 50.35 99.26 16.25 42.01 14.94 74 ER27a ExonRegion 0 21.24 31.56 94.11 41.91 12.79 9.00 17.33 46.75 23.63 63.77 82.73 12.23 2.62 82.81 120.15 57.51 73.91 62.74 30.30 49.22 13.91 14.96 10.12