Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 C19orf47 Gene 0 27.51 19.08 63.14 40.66 20.34 22.23 20.65 51.92 39.41 87.72 92.72 24.91 25.00 82.06 106.15 68.66 76.57 89.54 38.90 43.48 45.03 28.97 31.71 2 357884 Transcript 0 1.84 1.03 7.34 7.40 1.44 4.55 5.71 12.54 7.35 8.64 10.39 4.00 13.91 8.44 11.66 5.22 11.84 12.94 3.58 7.22 5.68 1.00 1.25 3 392035 Transcript 0 13.02 13.27 7.77 6.68 23.34 26.59 20.63 12.71 14.38 35.25 27.88 3.96 3.43 13.24 19.99 28.13 16.45 29.39 17.04 16.44 18.27 8.93 16.65 4 ER1a ExonRegion 0 5.51 0.00 0.00 0.00 0.00 2.40 0.66 1.15 1.19 0.13 2.11 0.00 0.00 4.37 0.00 0.27 6.43 0.07 2.08 1.39 0.00 0.00 3.76 5 E1a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 1.90 2.18 2.69 0.00 2.37 0.00 0.00 0.00 0.00 3.25 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 E2_Aa NovelBoundary 0 18.08 9.60 5.85 1.86 23.68 24.64 14.49 3.86 3.18 7.15 10.53 0.00 0.00 4.94 4.45 20.42 9.07 10.61 4.80 3.26 0.00 0.00 3.76 7 ER2a ExonRegion 0 30.30 12.04 5.00 4.02 35.29 42.24 33.58 3.59 15.66 26.69 38.72 3.85 6.70 22.02 34.35 44.72 25.10 19.03 27.81 17.49 27.21 15.35 29.46 8 E2a_E3a KnownJunction 0 21.78 32.69 19.40 19.24 56.11 62.98 45.18 29.12 36.26 82.68 60.02 12.00 0.00 10.12 23.36 59.30 20.85 76.36 26.64 33.94 29.53 14.51 37.13 9 ER3a ExonRegion 0 5.21 10.52 13.50 15.02 19.55 19.64 16.27 19.45 25.68 46.80 30.70 3.83 15.06 19.55 43.52 36.29 17.77 38.87 9.68 14.89 19.24 7.41 13.38 10 E3_Da KnownBoundary 0 0.00 0.00 8.40 1.60 3.65 5.56 4.11 4.11 0.00 6.69 2.42 0.00 0.00 0.00 10.75 4.36 3.93 12.15 9.41 3.00 2.47 0.00 0.00 11 E3a_E4a KnownJunction 0 0.00 3.09 22.03 22.21 4.33 11.24 14.57 34.30 18.17 25.79 26.69 12.00 41.72 20.95 34.98 12.13 29.08 38.76 8.66 20.26 17.05 3.00 0.00 12 ER3b ExonRegion 0 0.00 2.38 3.79 1.39 1.97 1.14 1.90 7.17 1.44 11.82 3.72 0.00 0.71 6.10 7.17 4.15 6.48 7.98 4.87 5.70 4.53 3.62 0.00 13 E3b_E4a KnownJunction 0 0.00 5.99 2.90 2.06 0.00 0.00 1.85 10.97 4.17 19.82 9.05 0.00 6.33 14.72 15.08 4.36 13.37 14.18 8.85 8.63 11.80 2.27 0.00 14 ER4a ExonRegion 0 21.89 8.00 65.95 41.24 11.28 9.04 10.35 62.13 52.75 115.04 144.33 31.98 35.44 87.26 117.20 84.91 118.83 112.40 61.83 61.41 59.37 34.31 35.01 15 E4a_E5a KnownJunction 0 40.82 10.00 116.50 81.71 28.52 7.72 7.73 105.31 95.17 185.86 303.81 68.12 41.23 146.39 147.97 147.14 261.43 178.46 83.86 129.37 81.11 39.80 87.67 16 ER5a ExonRegion 0 15.07 8.59 86.51 60.49 24.24 25.83 19.80 91.58 95.98 148.27 205.83 61.03 56.73 112.74 147.96 144.81 157.44 157.14 80.49 94.73 78.41 52.02 66.90 17 E5a_E6a KnownJunction 1 17.71 17.04 103.93 36.36 52.63 58.43 49.02 94.43 81.94 172.86 143.67 34.81 25.49 65.04 113.23 48.28 125.01 77.19 24.57 66.15 65.85 18.37 16.05 18 ER6a ExonRegion 0 25.99 25.28 83.57 44.29 50.57 79.22 58.56 80.03 78.61 137.50 182.35 63.57 68.51 95.39 138.64 80.17 172.23 113.34 45.08 56.07 82.10 41.72 27.99 19 E6a_E7a KnownJunction 0 23.34 30.39 122.76 82.37 24.87 22.66 19.21 103.34 132.20 177.42 138.77 76.52 117.04 117.43 175.17 106.90 134.27 170.37 51.58 71.84 67.52 69.26 37.05 20 ER7a ExonRegion 0 33.91 22.80 73.24 53.70 17.30 21.98 19.70 96.28 81.13 129.26 153.74 49.10 61.62 125.85 166.67 131.96 111.42 134.02 53.37 71.05 71.68 54.43 43.52 21 E7a_E8a KnownJunction 0 24.97 18.48 61.44 27.40 19.35 12.89 16.21 77.59 46.96 94.85 74.86 12.30 28.08 91.18 71.70 38.28 54.23 81.87 36.61 32.60 53.19 14.45 20.06 22 ER8a ExonRegion 0 34.68 17.62 78.76 56.29 23.64 31.17 26.57 80.36 51.88 105.33 98.81 40.07 51.19 107.52 121.38 97.94 73.05 129.96 42.85 46.46 56.22 32.41 29.23 23 E8a_E9a KnownJunction 0 25.12 24.60 102.69 73.02 42.87 27.03 29.54 86.38 63.11 120.83 103.66 12.00 40.42 94.24 99.14 87.84 65.54 104.13 55.91 59.38 44.17 40.23 18.44 24 ER9a ExonRegion 0 12.01 30.76 83.55 57.95 28.42 23.92 25.81 66.17 50.47 97.18 73.70 20.55 28.93 89.19 103.18 59.48 76.34 84.58 35.26 48.13 37.93 26.59 30.98 25 E9a_E10a KnownJunction 0 14.52 39.93 91.84 73.68 34.30 28.62 29.37 68.18 43.17 89.40 75.33 24.01 18.83 106.72 85.17 64.60 83.12 103.22 28.42 52.54 66.23 43.78 41.06 26 ER10a ExonRegion 0 31.58 22.01 66.59 41.32 19.54 19.42 19.75 45.75 30.24 83.48 81.87 19.20 15.51 83.31 108.05 59.73 69.43 85.52 36.81 39.94 41.38 27.12 31.50 27 IG25 Intergenic 0 6.77 16.45 13.39 19.21 16.92 12.98 16.16 18.00 17.20 20.47 3.56 4.92 4.23 4.48 5.67 5.33 6.42 17.22 7.87 17.13 8.09 3.31 4.59 28 IG25_AR3 ActiveIntergenicRegion 0 0.19 4.99 11.86 8.16 6.53 5.23 8.26 3.61 11.66 8.80 1.90 1.08 0.00 3.01 12.76 4.46 3.98 19.89 6.75 17.74 8.78 4.69 6.22 29 IG25_SR2 SilentIntergenicRegion 0 8.40 20.61 14.56 20.89 18.76 16.45 20.64 19.74 21.72 24.96 4.69 8.12 5.89 5.87 7.08 6.78 9.17 21.40 10.46 21.79 10.99 3.58 6.18 30 IG25_AR2 ActiveIntergenicRegion 0 9.40 24.47 31.39 29.09 21.85 22.33 22.95 39.86 28.48 40.15 6.65 1.64 6.09 8.79 10.88 9.37 8.04 42.77 13.23 35.36 14.21 9.25 7.15