Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ZNF235 Gene 0 3.33 3.52 1.89 2.16 3.78 5.83 3.45 0.98 3.51 3.80 2.80 0.90 0.98 3.45 3.31 3.16 5.46 4.04 2.13 3.65 1.16 0.73 1.45 2 391957 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.87 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 291182 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 433015 Transcript 0 6.96 2.89 3.67 12.09 22.07 35.43 5.74 2.18 6.05 13.59 7.00 0.00 6.01 4.94 6.18 11.19 20.10 16.00 0.00 2.36 0.00 0.00 0.00 5 359844 Transcript 0 2.54 2.85 0.74 3.54 9.10 21.27 6.09 0.69 3.71 6.65 3.09 0.87 1.88 3.25 2.90 4.16 8.58 4.43 0.00 1.28 1.32 0.00 0.00 6 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.87 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 ER2a ExonRegion 0 20.86 35.38 8.62 9.32 38.00 85.02 45.83 0.63 9.77 10.13 19.89 0.00 0.00 40.93 26.22 25.61 38.83 22.88 16.74 29.17 5.33 2.88 14.52 8 E2a_E3a KnownJunction 0 84.68 98.54 22.32 28.00 121.56 180.52 152.10 2.09 29.72 30.00 48.12 0.00 0.00 46.91 63.91 57.42 119.96 60.85 61.84 80.02 24.28 5.39 21.08 9 ER3a ExonRegion 0 22.91 32.92 17.37 19.97 40.22 57.87 48.90 4.64 22.11 20.97 15.49 4.33 0.00 16.89 21.60 18.26 43.59 41.06 13.75 32.86 6.65 1.75 8.30 10 E3a_E4a KnownJunction 0 0.00 4.87 7.75 11.62 3.06 22.49 7.55 7.68 17.39 10.37 0.00 6.30 0.00 2.47 13.35 11.79 0.00 11.15 0.00 11.51 5.68 3.12 8.54 11 ER4a ExonRegion 0 4.90 8.45 14.10 8.69 6.26 7.28 5.83 8.59 26.30 26.72 28.14 4.74 7.76 29.67 24.58 24.43 44.76 22.65 16.50 32.07 12.27 6.46 15.38 12 E4a_E5a KnownJunction 0 32.75 19.21 15.23 29.67 24.11 29.64 32.33 17.83 29.54 37.28 17.53 12.15 6.01 36.14 56.86 74.77 30.67 64.29 45.46 24.67 11.18 2.69 23.56 13 ER5a ExonRegion 0 44.02 27.48 14.11 28.44 60.68 60.52 34.22 9.38 31.58 28.70 18.75 12.94 8.10 24.07 38.65 30.89 39.02 48.66 27.27 32.24 11.65 7.17 12.73 14 E5_Da NovelBoundary 0 6.82 19.47 7.04 7.33 82.60 76.04 53.66 4.07 13.43 17.51 10.69 12.00 6.17 12.83 13.72 14.01 18.23 13.22 14.12 12.08 21.93 0.00 0.00 15 E5a_E6b KnownJunction 0 6.96 2.89 3.67 12.09 22.07 35.43 5.74 2.18 6.05 13.59 7.00 0.00 6.01 4.94 6.18 11.19 20.10 16.00 0.00 2.36 0.00 0.00 0.00 16 E5_Db NovelBoundary 0 0.00 3.16 0.00 2.96 17.15 16.41 23.14 2.55 4.86 4.43 2.68 19.51 0.00 0.00 0.00 4.36 13.84 4.68 0.00 9.08 5.81 2.63 0.00 17 E5b_E6b KnownJunction 0 9.04 13.02 0.00 7.62 7.64 58.55 19.34 2.42 11.14 17.22 7.16 0.00 0.00 7.42 0.00 11.62 28.70 8.42 0.00 0.00 2.29 0.00 0.00 18 ER5b ExonRegion 0 9.88 16.78 1.84 9.54 31.89 70.45 26.48 3.17 13.17 18.92 13.05 4.33 4.69 10.83 10.40 9.41 23.11 9.24 0.00 5.50 8.63 0.69 0.00 19 E6_Aa NovelBoundary 0 0.00 0.00 2.93 3.30 4.33 11.02 0.00 0.00 5.44 6.72 9.95 6.30 12.82 0.00 0.00 0.00 8.23 2.45 0.00 17.07 2.72 0.00 3.50 20 E6_Ab NovelBoundary 0 11.26 8.88 14.67 6.93 7.98 0.00 7.64 7.52 5.27 4.30 0.00 0.00 0.00 0.00 0.00 8.54 0.00 2.20 4.24 10.61 0.00 2.51 0.00 21 ER6a ExonRegion 0 2.54 2.85 0.74 3.54 9.10 21.27 6.09 0.69 3.71 6.65 3.09 0.87 1.88 3.25 2.90 4.16 8.58 4.43 0.00 1.28 1.32 0.00 0.00 22 ER6b ExonRegion 0 3.44 3.48 0.70 1.46 0.88 3.24 1.43 0.61 2.81 3.26 1.12 0.39 0.97 1.71 1.25 1.67 3.16 1.92 0.61 1.03 0.33 0.40 0.28 23 E6_Da KnownBoundary 0 0.00 0.00 0.00 1.73 0.00 0.00 0.00 0.00 2.75 4.11 2.42 0.00 0.00 0.00 0.00 4.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24 ER6c ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.86 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 ER6d ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.65 0.00 0.96 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26 ER6e ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.73 0.00 1.07 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27 E6_Ad KnownBoundary 0 0.00 0.00 1.66 0.00 3.48 0.00 0.00 3.49 0.00 0.00 0.00 0.00 5.84 0.00 0.00 0.00 3.46 2.11 7.91 0.00 0.00 0.00 0.00 28 ER6f ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29 E6_Dc KnownBoundary 0 3.33 3.35 0.00 2.90 0.00 0.00 0.00 0.00 5.70 1.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.19 0.00 0.00 0.00 0.00 0.00 30 ER6g ExonRegion 0 0.00 0.00 0.75 0.00 0.27 0.00 0.00 0.00 0.19 0.70 0.39 0.44 0.39 0.00 0.00 0.00 0.00 0.00 0.00 0.11 0.00 0.21 0.00 31 IG29_AR4 ActiveIntergenicRegion 0 0.35 2.20 2.09 8.06 1.90 0.00 6.40 0.00 3.60 3.15 3.06 15.33 11.92 2.23 3.14 0.00 4.54 1.69 3.05 7.89 0.00 0.00 0.00 32 IG29_AR3 ActiveIntergenicRegion 0 3.65 3.48 2.38 6.09 4.35 1.47 7.12 2.25 3.71 5.80 2.09 14.59 7.30 3.09 5.54 3.53 6.62 3.39 4.66 12.37 1.63 0.91 1.77 33 IG29_AR2 ActiveIntergenicRegion 0 0.45 2.03 0.00 0.39 4.97 0.00 3.97 0.00 3.35 7.62 0.00 2.78 19.10 0.00 0.00 2.97 3.30 5.15 2.28 12.16 4.41 0.00 2.94 34 IG29_SR1 SilentIntergenicRegion 0 7.16 14.91 9.89 10.09 12.64 15.01 9.17 5.77 9.60 15.52 3.46 8.62 10.12 4.21 8.21 6.66 6.86 5.32 6.10 16.38 1.89 1.10 2.99