Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ZNF227 Gene 0 67.14 112.82 69.98 80.56 72.31 37.75 47.64 39.07 63.69 98.02 82.21 67.17 64.13 65.30 61.11 55.01 68.51 58.64 66.76 74.48 31.87 34.69 23.78 2 313040 Transcript 0 32.81 65.79 31.83 32.52 37.93 23.45 32.66 25.37 39.67 67.82 67.33 37.17 43.51 48.87 37.35 45.60 57.48 42.27 32.68 53.32 33.01 21.44 18.13 3 377916 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 IG27_AR1 ActiveIntergenicRegion 0 5.53 23.91 13.71 32.23 23.02 9.27 28.22 7.45 15.40 20.26 0.69 12.21 9.70 3.28 5.40 2.55 2.10 11.29 12.31 56.64 2.27 0.89 2.77 5 IG27_SR1 SilentIntergenicRegion 0 6.78 39.50 12.87 19.25 11.28 3.40 14.02 6.61 9.28 15.26 1.02 5.75 4.80 2.36 3.79 1.61 0.40 6.74 11.77 32.24 0.68 0.32 1.36 6 IG27_SR2 SilentIntergenicRegion 0 6.77 40.94 5.15 17.44 25.69 19.07 16.86 10.95 2.47 6.50 0.00 0.00 4.69 0.00 2.90 0.00 0.00 3.57 7.64 18.01 0.00 0.00 0.00 7 IG27_AR3 ActiveIntergenicRegion 0 18.05 70.34 38.36 57.22 54.92 9.27 24.90 20.79 22.23 28.95 0.80 10.70 6.79 4.45 11.15 4.52 0.46 20.76 20.78 45.24 3.04 1.15 1.62 8 IG27_SR3 SilentIntergenicRegion 0 17.50 57.10 22.36 41.20 14.30 4.06 8.71 6.68 9.67 20.29 0.00 3.75 0.45 1.06 2.01 0.00 3.17 5.22 28.18 36.29 4.45 0.80 0.62 9 IG27_AR4 ActiveIntergenicRegion 0 12.44 110.48 45.84 68.36 40.08 13.06 23.58 19.77 22.70 24.09 1.49 2.94 3.02 3.61 7.85 4.62 4.24 12.47 16.25 58.65 4.29 2.58 2.18 10 ER1a ExonRegion 1 15.70 32.16 12.97 5.34 17.17 23.00 29.49 11.31 11.37 27.84 42.52 0.00 0.00 16.68 17.89 37.03 22.97 26.79 13.41 26.51 26.44 2.82 22.27 11 E1a_E2a KnownJunction 1 41.71 78.60 31.76 9.62 48.39 64.79 62.49 22.51 29.95 62.75 76.76 0.00 0.00 41.44 42.03 88.35 50.12 48.83 22.31 56.57 63.45 2.76 47.38 12 ER2a ExonRegion 1 25.34 54.54 25.54 21.45 26.77 20.63 19.51 23.01 39.34 62.54 76.72 18.24 12.92 21.61 16.83 40.04 74.00 51.58 44.72 45.05 48.55 9.52 18.19 13 E2_Da NovelBoundary 0 0.00 2.96 3.43 15.75 0.00 0.00 8.39 13.35 23.64 17.59 4.90 0.00 6.82 0.00 4.45 12.22 8.42 19.23 0.00 17.71 23.60 0.00 7.60 14 E2a_E3a KnownJunction 1 3.48 27.30 14.49 8.39 7.98 0.00 9.05 17.74 32.20 78.89 147.72 30.31 26.95 52.03 36.34 31.44 142.87 21.14 21.18 47.11 54.67 8.27 12.12 15 E2a_E4a NovelJunction 0 0.00 9.21 20.82 9.69 0.00 0.00 0.00 6.53 20.63 34.36 31.85 5.40 0.00 9.59 8.90 12.99 8.32 14.67 25.32 41.74 26.50 2.69 23.05 16 I2_AR1 ActiveIntronRegion 0 3.13 14.53 6.30 13.01 11.87 4.07 9.79 6.35 14.51 10.11 1.43 3.89 3.81 0.73 4.16 4.39 4.07 10.20 5.49 15.20 2.17 0.51 3.62 17 E3_Aa NovelBoundary 0 10.74 5.66 3.02 23.64 14.77 2.50 20.05 22.06 20.63 15.74 4.95 0.00 0.00 6.95 15.20 8.72 4.21 12.27 13.84 23.39 8.83 0.00 7.17 18 ER3a ExonRegion 0 18.88 31.13 17.29 12.16 7.98 4.02 11.81 17.51 33.51 68.98 64.66 37.08 34.04 65.91 57.04 86.81 63.57 41.22 53.59 46.33 39.28 20.73 14.59 19 E3_Da NovelBoundary 0 17.26 12.37 4.67 16.68 3.48 0.00 4.50 4.60 11.83 5.80 0.00 0.00 26.95 0.00 6.30 3.25 7.39 10.45 8.94 36.50 11.74 0.00 0.00 20 E3a_E4a KnownJunction 0 20.82 28.61 28.80 13.48 3.40 4.94 2.25 21.60 33.33 52.78 29.85 45.16 47.24 37.73 33.38 69.64 41.61 63.51 39.72 45.51 32.06 25.04 12.63 21 I3_SR1 SilentIntronRegion 0 5.36 6.88 6.37 23.81 7.47 2.64 12.22 5.45 13.45 16.72 1.29 5.67 8.39 1.35 3.04 1.52 4.31 3.11 4.04 14.83 1.35 1.90 2.32 22 I3_AR1 ActiveIntronRegion 0 5.91 6.72 11.52 19.32 8.27 6.52 12.57 10.04 11.22 13.72 3.11 10.64 13.39 1.01 4.67 3.87 5.87 5.11 5.38 11.97 1.64 4.19 3.12 23 I3_AR10 ActiveIntronRegion 0 11.57 8.47 8.08 16.91 27.85 18.13 29.28 9.38 11.97 14.23 17.60 11.73 7.04 5.87 7.99 10.83 16.32 14.81 5.80 23.79 17.76 7.06 9.15 24 E4_Aa NovelBoundary 0 12.52 18.62 21.58 15.45 3.40 13.46 10.95 23.41 12.21 24.26 14.27 0.00 0.00 2.47 9.02 14.95 25.81 13.68 35.77 26.91 13.10 8.33 7.51 25 ER4a ExonRegion 0 16.98 57.90 33.52 41.31 38.43 24.20 32.13 32.39 40.10 66.26 45.25 27.92 34.90 47.21 19.99 32.93 42.50 80.73 52.02 65.49 35.29 24.44 19.40 26 E4_Da NovelBoundary 0 9.71 11.38 16.44 19.88 3.23 5.79 0.00 13.06 17.07 12.84 10.16 30.76 13.15 18.66 9.77 25.98 25.71 29.39 20.99 29.47 12.60 6.18 6.66 27 E4a_E5a KnownJunction 0 16.23 104.46 18.45 29.90 20.12 21.01 43.72 19.18 42.33 61.22 46.22 28.96 74.83 37.26 14.34 8.03 37.68 24.21 7.06 30.04 28.79 13.72 4.35 28 E4a_E6a NovelJunction 0 3.11 18.42 7.69 5.93 7.64 2.84 6.05 1.52 4.63 18.56 6.58 12.00 0.00 4.94 0.00 0.00 12.16 0.00 14.40 15.28 9.39 0.00 0.00 29 I4_AR1 ActiveIntronRegion 0 9.49 10.63 6.14 12.52 8.50 8.22 11.87 5.29 7.91 7.66 9.39 5.61 7.52 6.12 9.31 6.11 11.10 9.44 14.28 7.15 7.40 5.06 9.33 30 ER5a ExonRegion 0 41.75 89.24 26.17 34.90 43.48 25.32 39.81 30.08 37.69 70.18 56.58 39.69 56.11 62.12 37.89 35.42 54.50 31.50 20.82 60.89 27.99 28.28 12.94 31 E5_Da NovelBoundary 0 9.93 3.29 5.26 27.30 0.00 0.00 4.15 1.97 14.29 6.85 9.74 11.55 6.82 0.00 5.19 0.00 12.16 3.73 3.67 11.57 3.15 2.45 4.35 32 E5a_E6a KnownJunction 0 56.68 66.63 28.18 30.47 76.49 17.83 47.87 31.26 41.17 74.11 89.23 32.11 68.34 81.88 52.29 41.19 56.38 35.90 4.80 71.14 14.39 43.11 8.37 33 ER6a ExonRegion 0 45.39 111.10 54.55 72.14 73.65 42.94 56.36 44.20 71.84 108.13 99.46 111.23 121.98 85.05 41.35 50.48 81.36 45.01 56.92 80.12 26.66 40.99 24.24 34 E6_Ab KnownBoundary 1 61.12 96.04 28.44 55.44 66.38 30.66 62.36 53.72 74.04 126.14 94.66 78.93 93.01 72.22 17.92 49.30 80.13 48.71 71.34 74.08 18.90 29.21 30.22 35 ER6b ExonRegion 0 63.46 140.51 79.97 85.12 73.82 39.26 47.73 39.54 67.26 102.77 94.56 67.34 64.66 78.61 52.93 68.58 80.91 82.37 85.93 84.86 38.01 34.50 26.80 36 E6_Da KnownBoundary 0 76.68 97.81 112.98 74.78 63.84 20.05 45.97 41.98 81.97 91.95 80.55 57.62 88.96 62.57 126.21 61.44 86.68 97.08 91.96 86.93 20.26 48.01 27.06 37 E6a_E6c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 38 ER6c ExonRegion 0 99.54 135.70 89.62 104.56 100.36 44.40 55.00 45.49 82.06 111.97 82.52 83.58 68.70 73.34 88.71 66.40 69.99 77.12 81.35 93.64 28.18 43.07 35.44 39 E6_Ac KnownBoundary 0 109.06 109.59 113.86 169.24 100.34 43.67 76.31 68.92 97.11 148.47 90.92 70.07 70.77 87.76 48.95 73.74 69.47 93.31 47.91 85.14 20.02 27.31 42.34 40 ER6d ExonRegion 0 106.19 126.95 96.76 111.49 92.51 44.08 55.40 44.66 71.80 111.33 80.91 60.50 48.07 59.39 97.63 57.95 64.20 56.57 77.05 77.08 31.99 40.16 24.62 41 E6_Db KnownBoundary 1 21.04 48.22 60.70 80.34 54.75 25.61 48.84 18.11 40.88 75.80 49.38 72.47 12.82 32.67 78.74 19.31 16.08 9.91 17.88 49.41 14.58 33.56 0.00 42 ER6e ExonRegion 0 24.07 37.92 32.45 39.05 28.84 11.82 15.05 13.48 20.84 36.03 17.84 28.88 19.57 13.06 27.45 5.04 9.74 1.99 7.00 24.74 3.33 16.03 3.71 43 IG28 Intergenic 0 9.74 13.47 11.12 20.42 9.39 4.82 10.76 5.26 10.51 10.91 2.84 7.11 5.58 1.96 3.94 4.22 3.39 4.20 8.01 14.93 1.22 2.24 4.36 44 IG28_SR1 SilentIntergenicRegion 0 11.28 16.58 10.48 17.28 10.90 6.96 11.89 5.42 11.14 12.07 3.82 6.66 5.12 1.96 4.94 4.11 4.69 5.35 10.96 18.25 1.39 2.79 4.91 45 IG28_AR1 ActiveIntergenicRegion 0 10.47 19.73 17.51 25.34 15.37 4.89 12.82 8.64 18.62 14.58 2.46 12.98 10.73 3.41 5.58 4.54 3.04 6.34 6.97 18.03 1.31 2.98 3.50 46 IG28_SR3 SilentIntergenicRegion 0 7.97 8.29 9.78 22.23 5.92 2.56 8.99 4.01 7.29 8.57 1.95 5.71 4.42 1.50 2.40 4.27 2.18 2.32 5.32 10.57 1.03 1.46 4.10